RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 ACSM6Q6P461 480 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 TEPPQ6URK8 271 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 ZNF114Q8NC26 417 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 OR10W1Q8NGF6 305 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 OR10G4Q8NGN3 311 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 OR10G9Q8NGN4 311 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 OR10G7Q8NGN6 311 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 PERPQ96FX8 193 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 NARS2Q96I59 477 aaKnown RBP6.44□□□□□ -1.38
COL4A5-208ENST00000505728 SLC35E1Q96K37 410 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 SEC11CQ9BY50 192 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 GSX1Q9H4S2 264 aaPredicted RBP6.44□□□□□ -1.38
COL4A5-208ENST00000505728 VSIRQ9H7M9 311 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 TPSG1Q9NRR2 321 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 BEX4Q9NWD9 120 aaPredicted RBP6.44□□□□□ -1.38
COL4A5-208ENST00000505728 C1RLQ9NZP8 487 aa6.44□□□□□ -1.38
COL4A5-208ENST00000505728 CARHSP1Q9Y2V2 147 aaKnown RBP6.44□□□□□ -1.38
COL4A5-208ENST00000505728 JMJD1CQ15652 2540 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 CSPG4Q6UVK1 2322 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 FN1P02751 2386 aaKnown RBP6.43□□□□□ -1.38
COL4A5-208ENST00000505728 IGLC7A0M8Q6 106 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 RBFOX3A6NFN3 312 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 SEC14L6B5MCN3 397 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 F8W036 122 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 NDUFS6O75380 124 aaKnown RBP6.43□□□□□ -1.38
COL4A5-208ENST00000505728 APOC3P02656 99 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 FAM106CPP0CH98 169 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 TAGLN2P37802 199 aaKnown RBP6.43□□□□□ -1.38
COL4A5-208ENST00000505728 CCL20P78556 96 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 AKR1C1Q04828 323 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 GAMTQ14353 236 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 PLGLAQ15195 96 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 MMDQ15546 238 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 ZNF726P1Q15940 193 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 CLEC12BQ2HXU8 276 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 C5orf64Q2M2E5 130 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 TMEM249Q2WGJ8 235 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 KHDC3LQ587J8 217 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 ZNF506Q5JVG8 444 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 C10orf55Q5SWW7 151 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 LRRC75A-AS1Q8N1F1 130 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 DYNAPQ8N1N2 210 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 RPP25LQ8N5L8 163 aaKnown RBP6.43□□□□□ -1.38
COL4A5-208ENST00000505728 Q8N6K4 173 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 OR1P1Q8NH06 330 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 C1orf159Q96HA4 380 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 RCC1LQ96I51 464 aaKnown RBP6.43□□□□□ -1.38
COL4A5-208ENST00000505728 P2RX4Q99571 388 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 MGST2Q99735 147 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 GGTLC1Q9BX51 225 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 EIF5A2Q9GZV4 153 aaKnown RBP6.43□□□□□ -1.38
COL4A5-208ENST00000505728 TMEM231Q9H6L2 316 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 FAM96BQ9Y3D0 163 aa6.43□□□□□ -1.38
COL4A5-208ENST00000505728 CENPVL3A0A0U1RRI6 287 aa6.42□□□□□ -1.38
COL4A5-208ENST00000505728 MAP1LC3B2A6NCE7 125 aa6.42□□□□□ -1.38
COL4A5-208ENST00000505728 B4DSR2 109 aa6.42□□□□□ -1.38
COL4A5-208ENST00000505728 CORTO00230 105 aa6.42□□□□□ -1.38
COL4A5-208ENST00000505728 FCN1O00602 326 aa6.42□□□□□ -1.38
COL4A5-208ENST00000505728 NPFFO15130 113 aa6.42□□□□□ -1.38
COL4A5-208ENST00000505728 CNIH1O95406 144 aa6.42□□□□□ -1.38
COL4A5-208ENST00000505728 IFNA1P01562 189 aa6.42□□□□□ -1.38
COL4A5-208ENST00000505728 GATA3P23771 443 aa6.42□□□□□ -1.38
COL4A5-208ENST00000505728 CDC34P49427 236 aaPredicted RBP6.42□□□□□ -1.38
COL4A5-208ENST00000505728 PPT1P50897 306 aa6.42□□□□□ -1.38
COL4A5-208ENST00000505728 HES1Q14469 280 aa6.42□□□□□ -1.38
COL4A5-208ENST00000505728 HNF4GQ14541 408 aa6.42□□□□□ -1.38
COL4A5-208ENST00000505728 FAM122CQ6P4D5 195 aa6.42□□□□□ -1.38
COL4A5-208ENST00000505728 LCN15Q6UWW0 184 aa6.42□□□□□ -1.38
COL4A5-208ENST00000505728 RBMS3Q6XE24 437 aaKnown RBP6.42□□□□□ -1.38
COL4A5-208ENST00000505728 SLC16A13Q7RTY0 426 aa6.42□□□□□ -1.38
COL4A5-208ENST00000505728 SVBPQ8N300 66 aa6.42□□□□□ -1.38
COL4A5-208ENST00000505728 OR1L6Q8NGR2 347 aa6.42□□□□□ -1.38
COL4A5-208ENST00000505728 SRSF12Q8WXF0 261 aaKnown RBP6.42□□□□□ -1.38
COL4A5-208ENST00000505728 AJUBAQ96IF1 538 aa6.42□□□□□ -1.38
COL4A5-208ENST00000505728 MAP1LC3BQ9GZQ8 125 aa6.42□□□□□ -1.38
COL4A5-208ENST00000505728 SLC35B3Q9H1N7 401 aa6.42□□□□□ -1.38
COL4A5-208ENST00000505728 SLC45A2Q9UMX9 530 aa6.42□□□□□ -1.38
COL4A5-208ENST00000505728 PXMP4Q9Y6I8 212 aa6.42□□□□□ -1.38
COL4A5-208ENST00000505728 FBN3Q75N90 2809 aa6.42□□□□□ -1.38
COL4A5-208ENST00000505728 TRAV20A0A0B4J274 112 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 IGHV1-69DA0A0B4J2H0 117 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 A0A1B0GV50 99 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 A0A1W2PPV4 95 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 TEX22C9J3V5 150 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 C9JQL5 133 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 YIF1AO95070 293 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 IGHV1-69P01742 117 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 HSPB1P04792 205 aaKnown RBP6.41□□□□□ -1.38
COL4A5-208ENST00000505728 CRYGCP07315 174 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 MSMBP08118 114 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 SFTA3P0C7M3 94 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 LINC00869P0C866 280 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 TMEM11P17152 192 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 B2MP61769 119 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 GNB1P62873 340 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 PRR20EP86478 221 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 PRR20CP86479 221 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 PRR20DP86480 221 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 PRR20BP86481 221 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 PRR20AP86496 221 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms