RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 NUPL2O15504 423 aaKnown RBP7.6□□□□□ -1.19
NR1I3-220ENST00000505005 SAP30O75446 220 aa7.6□□□□□ -1.19
NR1I3-220ENST00000505005 VAMP1P23763 118 aa7.6□□□□□ -1.19
NR1I3-220ENST00000505005 ARL3P36405 182 aa7.6□□□□□ -1.19
NR1I3-220ENST00000505005 HOXA1P49639 335 aaPredicted RBP7.6□□□□□ -1.19
NR1I3-220ENST00000505005 MFAP4P55083 255 aa7.6□□□□□ -1.19
NR1I3-220ENST00000505005 TMEM187Q14656 261 aa7.6□□□□□ -1.19
NR1I3-220ENST00000505005 SMCO1Q147U7 214 aa7.6□□□□□ -1.19
NR1I3-220ENST00000505005 SP6Q3SY56 376 aa7.6□□□□□ -1.19
NR1I3-220ENST00000505005 C10orf55Q5SWW7 151 aa7.6□□□□□ -1.19
NR1I3-220ENST00000505005 FAAP20Q6NZ36 180 aa7.6□□□□□ -1.19
NR1I3-220ENST00000505005 TMED4Q7Z7H5 227 aa7.6□□□□□ -1.19
NR1I3-220ENST00000505005 SELENOHQ8IZQ5 122 aaKnown RBP7.6□□□□□ -1.19
NR1I3-220ENST00000505005 OR9G4Q8NGQ1 327 aa7.6□□□□□ -1.19
NR1I3-220ENST00000505005 DCUN1D4Q92564 292 aa7.6□□□□□ -1.19
NR1I3-220ENST00000505005 FANCD2OSQ96PS1 177 aa7.6□□□□□ -1.19
NR1I3-220ENST00000505005 OR5B12Q96R08 314 aa7.6□□□□□ -1.19
NR1I3-220ENST00000505005 C21orf62Q9NYP8 219 aa7.6□□□□□ -1.19
NR1I3-220ENST00000505005 TECRQ9NZ01 308 aaKnown RBP7.6□□□□□ -1.19
NR1I3-220ENST00000505005 UFC1Q9Y3C8 167 aa7.6□□□□□ -1.19
NR1I3-220ENST00000505005 TRAV3A0A0B4J244 114 aa7.59□□□□□ -1.19
NR1I3-220ENST00000505005 ANKRD34BA5PLL1 514 aa7.59□□□□□ -1.19
NR1I3-220ENST00000505005 G3V4G9 280 aa7.59□□□□□ -1.19
NR1I3-220ENST00000505005 SCAF4O95104 1147 aaKnown RBP7.59□□□□□ -1.19
NR1I3-220ENST00000505005 SFT2D2O95562 160 aa7.59□□□□□ -1.19
NR1I3-220ENST00000505005 IGKV1-39P01597 117 aa7.59□□□□□ -1.19
NR1I3-220ENST00000505005 IGKV1D-39P04432 117 aa7.59□□□□□ -1.19
NR1I3-220ENST00000505005 CLEC3BP05452 202 aa7.59□□□□□ -1.19
NR1I3-220ENST00000505005 P0C879 139 aa7.59□□□□□ -1.19
NR1I3-220ENST00000505005 APELAP0DMC3 54 aa7.59□□□□□ -1.19
NR1I3-220ENST00000505005 SLC25A4P12235 298 aa7.59□□□□□ -1.19
NR1I3-220ENST00000505005 AREGP15514 252 aa7.59□□□□□ -1.19
NR1I3-220ENST00000505005 S100A7P31151 101 aa7.59□□□□□ -1.19
NR1I3-220ENST00000505005 RRAS2P62070 204 aaPredicted RBP7.59□□□□□ -1.19
NR1I3-220ENST00000505005 WT1-ASQ06250 92 aa7.59□□□□□ -1.19
NR1I3-220ENST00000505005 DEFB136Q30KP8 78 aa7.59□□□□□ -1.19
NR1I3-220ENST00000505005 ANKRD55Q3KP44 614 aa7.59□□□□□ -1.19
NR1I3-220ENST00000505005 AKAP14Q86UN6 197 aa7.59□□□□□ -1.19
NR1I3-220ENST00000505005 RNASEH2CQ8TDP1 164 aaKnown RBP7.59□□□□□ -1.19
NR1I3-220ENST00000505005 DLX4Q92988 240 aaPredicted RBP7.59□□□□□ -1.19
NR1I3-220ENST00000505005 NEURL2Q9BR09 285 aa7.59□□□□□ -1.19
NR1I3-220ENST00000505005 HEYLQ9NQ87 328 aaPredicted RBP7.59□□□□□ -1.19
NR1I3-220ENST00000505005 PFDN2Q9UHV9 154 aa7.59□□□□□ -1.19
NR1I3-220ENST00000505005 ALG5Q9Y673 324 aa7.59□□□□□ -1.19
NR1I3-220ENST00000505005 PKD1L1Q8TDX9 2849 aa7.59□□□□□ -1.19
NR1I3-220ENST00000505005 NOTCH3Q9UM47 2321 aa7.58□□□□□ -1.2
NR1I3-220ENST00000505005 hCG_2014768A0A024R1R8 64 aa7.58□□□□□ -1.2
NR1I3-220ENST00000505005 TRAV6A0A075B6T7 132 aa7.58□□□□□ -1.2
NR1I3-220ENST00000505005 CEBPZOSA8MTT3 80 aa7.58□□□□□ -1.2
NR1I3-220ENST00000505005 E7EUB6 86 aa7.58□□□□□ -1.2
NR1I3-220ENST00000505005 ST8SIA3O43173 380 aa7.58□□□□□ -1.2
NR1I3-220ENST00000505005 IGKV1-5P01602 117 aa7.58□□□□□ -1.2
NR1I3-220ENST00000505005 RAB11AP62491 216 aa7.58□□□□□ -1.2
NR1I3-220ENST00000505005 LCN12Q6JVE5 192 aa7.58□□□□□ -1.2
NR1I3-220ENST00000505005 C18orf65Q6ZTR6 163 aa7.58□□□□□ -1.2
NR1I3-220ENST00000505005 OR1S1Q8NH92 325 aa7.58□□□□□ -1.2
NR1I3-220ENST00000505005 GINS3Q9BRX5 216 aa7.58□□□□□ -1.2
NR1I3-220ENST00000505005 CACNG5Q9UF02 275 aa7.58□□□□□ -1.2
NR1I3-220ENST00000505005 ZNF256Q9Y2P7 627 aaPredicted RBP7.58□□□□□ -1.2
NR1I3-220ENST00000505005 NSG2Q9Y328 171 aa7.58□□□□□ -1.2
NR1I3-220ENST00000505005 CGB1A6NKQ9 187 aa7.57□□□□□ -1.2
NR1I3-220ENST00000505005 K7EMT4 169 aa7.57□□□□□ -1.2
NR1I3-220ENST00000505005 NDUFA4O00483 81 aa7.57□□□□□ -1.2
NR1I3-220ENST00000505005 TGOLN2O43493 480 aa7.57□□□□□ -1.2
NR1I3-220ENST00000505005 GNG7O60262 68 aa7.57□□□□□ -1.2
NR1I3-220ENST00000505005 NDUFB8O95169 186 aa7.57□□□□□ -1.2
NR1I3-220ENST00000505005 HLA-AP01891 365 aaKnown RBP7.57□□□□□ -1.2
NR1I3-220ENST00000505005 FABP1P07148 127 aa7.57□□□□□ -1.2
NR1I3-220ENST00000505005 OR4E1P0C645 316 aa7.57□□□□□ -1.2
NR1I3-220ENST00000505005 CMC4P56277 68 aaPredicted RBP7.57□□□□□ -1.2
NR1I3-220ENST00000505005 C4orf46Q504U0 113 aa7.57□□□□□ -1.2
NR1I3-220ENST00000505005 C2orf83Q53S99 150 aa7.57□□□□□ -1.2
NR1I3-220ENST00000505005 Q56UQ5 140 aa7.57□□□□□ -1.2
NR1I3-220ENST00000505005 LAMTOR1Q6IAA8 161 aa7.57□□□□□ -1.2
NR1I3-220ENST00000505005 CLEC19AQ6UXS0 136 aa7.57□□□□□ -1.2
NR1I3-220ENST00000505005 LYG2Q86SG7 212 aa7.57□□□□□ -1.2
NR1I3-220ENST00000505005 OR10W1Q8NGF6 305 aa7.57□□□□□ -1.2
NR1I3-220ENST00000505005 ZNF502Q8TBZ5 544 aa7.57□□□□□ -1.2
NR1I3-220ENST00000505005 ZNF431Q8TF32 576 aaPredicted RBP7.57□□□□□ -1.2
NR1I3-220ENST00000505005 CASTOR1Q8WTX7 329 aa7.57□□□□□ -1.2
NR1I3-220ENST00000505005 RBMXL1Q96E39 390 aaKnown RBP7.57□□□□□ -1.2
NR1I3-220ENST00000505005 NARS2Q96I59 477 aaKnown RBP7.57□□□□□ -1.2
NR1I3-220ENST00000505005 DUX3Q96PT4 197 aa7.57□□□□□ -1.2
NR1I3-220ENST00000505005 MED28Q9H204 178 aa7.57□□□□□ -1.2
NR1I3-220ENST00000505005 MRPL27Q9P0M9 148 aaKnown RBP7.57□□□□□ -1.2
NR1I3-220ENST00000505005 NBEAL1Q6ZS30 2694 aa7.57□□□□□ -1.2
NR1I3-220ENST00000505005 TRAV25A0A0B4J276 109 aa7.56□□□□□ -1.2
NR1I3-220ENST00000505005 C9orf170A2RU37 121 aa7.56□□□□□ -1.2
NR1I3-220ENST00000505005 A8MWP6 167 aa7.56□□□□□ -1.2
NR1I3-220ENST00000505005 WRBO00258 174 aa7.56□□□□□ -1.2
NR1I3-220ENST00000505005 PRH1P02810 166 aa7.56□□□□□ -1.2
NR1I3-220ENST00000505005 REG1AP05451 166 aa7.56□□□□□ -1.2
NR1I3-220ENST00000505005 SLURP1P55000 103 aa7.56□□□□□ -1.2
NR1I3-220ENST00000505005 SYNJ2BPP57105 145 aa7.56□□□□□ -1.2
NR1I3-220ENST00000505005 SUPT4H1P63272 117 aaKnown RBP7.56□□□□□ -1.2
NR1I3-220ENST00000505005 TNFRSF9Q07011 255 aa7.56□□□□□ -1.2
NR1I3-220ENST00000505005 NMSQ5H8A3 153 aa7.56□□□□□ -1.2
NR1I3-220ENST00000505005 S100A7AQ86SG5 101 aa7.56□□□□□ -1.2
NR1I3-220ENST00000505005 GTSCR1Q86UQ5 136 aa7.56□□□□□ -1.2
NR1I3-220ENST00000505005 TCTE3Q8IZS6 198 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms