RNA–Protein interactions for RNA: ENST00000504959.5

SNX25-203, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 1,868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-203ENST00000504959 TIMM9Q9Y5J7 89 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 TRAV38-1A0A0B4J264 116 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 hADV38S2A0JD32 116 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 SMCO3A2RU48 225 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 MAP1LC3B2A6NCE7 125 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 GAGE12JA6NER3 117 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 DPRXA6NFQ7 191 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 K7ENP7 123 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 ITGB1BP1O14713 200 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 HIST1H2BKO60814 126 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 HIST1H2BJP06899 126 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 OR9G9P0C7N8 305 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 HIST1H2BOP23527 126 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 CCKARP32238 428 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 HIST1H2BBP33778 126 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 GNG10P50151 68 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 HIST1H2BDP58876 126 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 SEC61BP60468 96 aaKnown RBP4.6□□□□□ -1.67
SNX25-203ENST00000504959 SPCS3P61009 180 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 HIST1H2BCP62807 126 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 HIST2H2BEQ16778 126 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 C17orf58Q2M2W7 97 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.6□□□□□ -1.67
SNX25-203ENST00000504959 SPNS3Q6ZMD2 512 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 C1orf87Q8N0U7 546 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 LYG1Q8N1E2 194 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 FAM216BQ8N7L0 139 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 THAP8Q8NA92 274 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.6□□□□□ -1.67
SNX25-203ENST00000504959 HIST1H2BHQ93079 126 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 ADTRPQ96IZ2 230 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 HIST1H2BNQ99877 126 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 HIST1H2BMQ99879 126 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 MAP1LC3BQ9GZQ8 125 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 IFI27L2Q9H2X8 130 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 ENY2Q9NPA8 101 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 TMEM242Q9NWH2 141 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 DCAF16Q9NXF7 216 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 IDI2-AS1Q9NZ38 188 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 WDR83OSQ9Y284 106 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 URGCP-MRPS24S4R325 110 aa4.6□□□□□ -1.67
SNX25-203ENST00000504959 RP1L1Q8IWN7 2480 aaPredicted RBP4.6□□□□□ -1.67
SNX25-203ENST00000504959 SPTBN4Q9H254 2564 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 SAA2-SAA4A0A096LPE2 208 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 SLC31A2O15432 143 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 CYB5BO43169 146 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 RBFOX2O43251 390 aaKnown RBP eCLIP4.59□□□□□ -1.67
SNX25-203ENST00000504959 TRGC2P03986 189 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 SAA2P0DJI9 122 aaPredicted RBP4.59□□□□□ -1.67
SNX25-203ENST00000504959 BCL2P10415 239 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 IER3P46695 156 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 THBS3P49746 956 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 RND2P52198 227 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 RAB11AP62491 216 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 GNB2P62879 340 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 MRPS11P82912 194 aaKnown RBP4.59□□□□□ -1.67
SNX25-203ENST00000504959 TMEM30BQ3MIR4 351 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 CT45A1Q5HYN5 189 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 FFAR4Q5NUL3 377 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 TEX36Q5VZQ5 186 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 DUX4L9Q6RFH8 374 aaPredicted RBP4.59□□□□□ -1.67
SNX25-203ENST00000504959 ZNF788Q6ZQV5 615 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 VKORC1L1Q8N0U8 176 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 ZNF383Q8NA42 475 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 OR10G9Q8NGN4 311 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 OR10G7Q8NGN6 311 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 OR10D4PQ8NGN7 298 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 CT45A3Q8NHU0 189 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 MBD3L1Q8WWY6 194 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 LHX4Q969G2 390 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 FAM210BQ96KR6 192 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 GAL3ST2Q9H3Q3 398 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 DYNLRB1Q9NP97 96 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 GAB2Q9UQC2 676 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 ZNF835Q9Y2P0 537 aa4.59□□□□□ -1.67
SNX25-203ENST00000504959 PLCE1Q9P212 2302 aa4.59□□□□□ -1.68
SNX25-203ENST00000504959 ANKRD11Q6UB99 2663 aaPredicted RBP4.59□□□□□ -1.68
SNX25-203ENST00000504959 CACNA1AO00555 2505 aa4.58□□□□□ -1.68
SNX25-203ENST00000504959 PPIAL4EA0A075B759 164 aa4.58□□□□□ -1.68
SNX25-203ENST00000504959 TRGV8A0A0C4DH27 118 aa4.58□□□□□ -1.68
SNX25-203ENST00000504959 PPIAL4DF5H284 164 aa4.58□□□□□ -1.68
SNX25-203ENST00000504959 CLDN34H7C241 214 aa4.58□□□□□ -1.68
SNX25-203ENST00000504959 PPP1R2P9O14990 202 aa4.58□□□□□ -1.68
SNX25-203ENST00000504959 TGOLN2O43493 480 aa4.58□□□□□ -1.68
SNX25-203ENST00000504959 PROP1O75360 226 aa4.58□□□□□ -1.68
SNX25-203ENST00000504959 HRASP01112 189 aa4.58□□□□□ -1.68
SNX25-203ENST00000504959 SOD3P08294 240 aa4.58□□□□□ -1.68
SNX25-203ENST00000504959 RD3LP0DJH9 198 aa4.58□□□□□ -1.68
SNX25-203ENST00000504959 PPIAL4FP0DN26 164 aa4.58□□□□□ -1.68
SNX25-203ENST00000504959 CGB3P0DN86 165 aa4.58□□□□□ -1.68
SNX25-203ENST00000504959 CGB7P0DN87 165 aa4.58□□□□□ -1.68
SNX25-203ENST00000504959 CD1BP29016 333 aa4.58□□□□□ -1.68
SNX25-203ENST00000504959 PSMB3P49720 205 aa4.58□□□□□ -1.68
SNX25-203ENST00000504959 RPL31P62899 125 aaKnown RBP4.58□□□□□ -1.68
SNX25-203ENST00000504959 TFF3Q07654 80 aa4.58□□□□□ -1.68
SNX25-203ENST00000504959 ZNF415Q09FC8 603 aa4.58□□□□□ -1.68
SNX25-203ENST00000504959 RTL8BQ17RB0 113 aa4.58□□□□□ -1.68
SNX25-203ENST00000504959 ACOT6Q3I5F7 207 aaPredicted RBP4.58□□□□□ -1.68
SNX25-203ENST00000504959 PRR30Q53SZ7 412 aaPredicted RBP4.58□□□□□ -1.68
SNX25-203ENST00000504959 DNLZQ5SXM8 178 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms