RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 COMMD1Q8N668 190 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 C11orf44Q8N8P7 122 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 C2orf50Q96LR7 162 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 OR4C12Q96R67 309 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 GON7Q9BXV9 100 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 NMES1Q9C002 83 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 MAGT1Q9H0U3 335 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 SLA2Q9H6Q3 261 aa3.81□□□□□ -1.8
LMNB1-208ENST00000504788 GPN1Q9HCN4 374 aaPredicted RBP3.81□□□□□ -1.8
LMNB1-208ENST00000504788 GOSR2O14653 212 aa3.8□□□□□ -1.8
LMNB1-208ENST00000504788 CCNKO75909 580 aa3.8□□□□□ -1.8
LMNB1-208ENST00000504788 ACTL6BO94805 426 aa3.8□□□□□ -1.8
LMNB1-208ENST00000504788 NKX2-1P43699 371 aaPredicted RBP3.8□□□□□ -1.8
LMNB1-208ENST00000504788 RHOGP84095 191 aa3.8□□□□□ -1.8
LMNB1-208ENST00000504788 C15orf32Q32M92 178 aa3.8□□□□□ -1.8
LMNB1-208ENST00000504788 CENPVQ7Z7K6 275 aaPredicted RBP3.8□□□□□ -1.8
LMNB1-208ENST00000504788 NECAP1Q8NC96 275 aa3.8□□□□□ -1.8
LMNB1-208ENST00000504788 ZNF502Q8TBZ5 544 aa3.8□□□□□ -1.8
LMNB1-208ENST00000504788 DTD1Q8TEA8 209 aa3.8□□□□□ -1.8
LMNB1-208ENST00000504788 SCARB1Q8WTV0 552 aa3.8□□□□□ -1.8
LMNB1-208ENST00000504788 PPP1R1CQ8WVI7 109 aa3.8□□□□□ -1.8
LMNB1-208ENST00000504788 MS4A10Q96PG2 267 aa3.8□□□□□ -1.8
LMNB1-208ENST00000504788 ZFP57Q9NU63 452 aa3.8□□□□□ -1.8
LMNB1-208ENST00000504788 NOTCH3Q9UM47 2321 aa3.8□□□□□ -1.8
LMNB1-208ENST00000504788 FAM223BA6NKX1 122 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 BMPR1BO00238 502 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 DEDDO75618 318 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 OR2J3O76001 311 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 MPC2O95563 127 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 IFNA17P01571 189 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 CTSGP08311 255 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 HTR2BP41595 481 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 TAS2R30P59541 319 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 SLC35B1P78383 322 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 DEFB136Q30KP8 78 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 ARSJQ5FYB0 599 aaPredicted RBP3.79□□□□□ -1.8
LMNB1-208ENST00000504788 PRSS54Q6PEW0 395 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 NDUFA11Q86Y39 141 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 FAM223AQ8IWN6 122 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 TMEM116Q8NCL8 245 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 SLC24A4Q8NFF2 622 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 OR1S1Q8NH92 325 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 C4orf3Q8WVX3 66 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 RAX2Q96IS3 184 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 ST6GAL2Q96JF0 529 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 SMIM8Q96KF7 97 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 ATP6V0BQ99437 205 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 PLEKHA3Q9HB20 300 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 OR5AC2Q9NZP5 309 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 CACFD1Q9UGQ2 172 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 TSSC4Q9Y5U2 329 aaPredicted RBP3.79□□□□□ -1.8
LMNB1-208ENST00000504788 U3KQ87 197 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 NOTCH1P46531 2555 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 IGKV1D-37A0A075B6S9 117 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.79□□□□□ -1.8
LMNB1-208ENST00000504788 C13orf42A0A1B0GVH6 325 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 H3BP45 60 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 WRBO00258 174 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 TSC22D2O75157 780 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 TSPAN15O95858 294 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 IFNA21P01568 189 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 IGKV1-17P01599 117 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 TRGV3P03979 118 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 LGALS1P09382 135 aaKnown RBP3.79□□□□□ -1.8
LMNB1-208ENST00000504788 PF4V1P10720 104 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 IAPPP10997 89 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 ATP5IP56385 69 aaPredicted RBP3.79□□□□□ -1.8
LMNB1-208ENST00000504788 TPPP2P59282 170 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 CD69Q07108 199 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 CD300CQ08708 224 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 SHISA2Q6UWI4 295 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 GSG1LQ6UXU4 331 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 IL34Q6ZMJ4 242 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 ADAMTSL5Q6ZMM2 481 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 C8orf86Q6ZUL3 223 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 UXS1Q8NBZ7 420 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 WFDC9Q8NEX5 89 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 OR4X2Q8NGF9 303 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 VN1R17PQ8TDU5 208 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 ABHD5Q8WTS1 349 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 BSCL2Q96G97 398 aaPredicted RBP3.79□□□□□ -1.8
LMNB1-208ENST00000504788 USMG5Q96IX5 58 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 CHRDL1Q9BU40 450 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 HINT2Q9BX68 163 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 ZNF436Q9C0F3 470 aaPredicted RBP3.79□□□□□ -1.8
LMNB1-208ENST00000504788 LYRM2Q9NU23 88 aaPredicted RBP3.79□□□□□ -1.8
LMNB1-208ENST00000504788 FBXL7Q9UJT9 491 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 S4R3C0 116 aa3.79□□□□□ -1.8
LMNB1-208ENST00000504788 IGHV4OR15-8A0A075B7B6 117 aa3.78□□□□□ -1.8
LMNB1-208ENST00000504788 A0A087WW49 117 aa3.78□□□□□ -1.8
LMNB1-208ENST00000504788 IGSF23A1L1A6 192 aa3.78□□□□□ -1.8
LMNB1-208ENST00000504788 RNF222A6NCQ9 220 aa3.78□□□□□ -1.8
LMNB1-208ENST00000504788 C5orf51A6NDU8 294 aa3.78□□□□□ -1.8
LMNB1-208ENST00000504788 SSNA1O43805 119 aa3.78□□□□□ -1.8
LMNB1-208ENST00000504788 SSSCA1O60232 199 aa3.78□□□□□ -1.8
LMNB1-208ENST00000504788 MT-CO2P00403 227 aa3.78□□□□□ -1.8
LMNB1-208ENST00000504788 IGHV3-11P01762 117 aa3.78□□□□□ -1.8
LMNB1-208ENST00000504788 IGHV3-48P01763 117 aa3.78□□□□□ -1.8
LMNB1-208ENST00000504788 GIPP09681 153 aaPredicted RBP3.78□□□□□ -1.8
LMNB1-208ENST00000504788 IGLC1P0CG04 106 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms