RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 BPIFCQ8NFQ6 507 aa10.56□□□□□ -0.72
LMNA-220ENST00000504687 SLC35E1Q96K37 410 aa10.56□□□□□ -0.72
LMNA-220ENST00000504687 ACTR3CQ9C0K3 210 aaPredicted RBP10.56□□□□□ -0.72
LMNA-220ENST00000504687 VSIRQ9H7M9 311 aa10.56□□□□□ -0.72
LMNA-220ENST00000504687 HIF1ANQ9NWT6 349 aa10.56□□□□□ -0.72
LMNA-220ENST00000504687 SLC45A2Q9UMX9 530 aa10.56□□□□□ -0.72
LMNA-220ENST00000504687 AKAP6Q13023 2319 aa10.56□□□□□ -0.72
LMNA-220ENST00000504687 AKR1C1Q04828 323 aa10.55□□□□□ -0.72
LMNA-220ENST00000504687 FXYD3Q14802 87 aa10.55□□□□□ -0.72
LMNA-220ENST00000504687 GUK1Q16774 197 aa10.55□□□□□ -0.72
LMNA-220ENST00000504687 KRTAP1-3Q8IUG1 177 aa10.55□□□□□ -0.72
LMNA-220ENST00000504687 TMEM116Q8NCL8 245 aa10.55□□□□□ -0.72
LMNA-220ENST00000504687 OR10G4Q8NGN3 311 aa10.55□□□□□ -0.72
LMNA-220ENST00000504687 OR10G9Q8NGN4 311 aa10.55□□□□□ -0.72
LMNA-220ENST00000504687 OR10G7Q8NGN6 311 aa10.55□□□□□ -0.72
LMNA-220ENST00000504687 SFT2D1Q8WV19 159 aa10.55□□□□□ -0.72
LMNA-220ENST00000504687 TMEM68Q96MH6 324 aa10.55□□□□□ -0.72
LMNA-220ENST00000504687 LINC00052Q96N35 136 aa10.55□□□□□ -0.72
LMNA-220ENST00000504687 SEC11CQ9BY50 192 aa10.55□□□□□ -0.72
LMNA-220ENST00000504687 FNDC4Q9H6D8 234 aaPredicted RBP10.55□□□□□ -0.72
LMNA-220ENST00000504687 CARHSP1Q9Y2V2 147 aaKnown RBP10.55□□□□□ -0.72
LMNA-220ENST00000504687 PXMP4Q9Y6I8 212 aa10.55□□□□□ -0.72
LMNA-220ENST00000504687 HECTD1Q9ULT8 2610 aa10.55□□□□□ -0.72
LMNA-220ENST00000504687 TRAV40A0A0B4J280 105 aa10.54□□□□□ -0.72
LMNA-220ENST00000504687 SMCO3A2RU48 225 aa10.54□□□□□ -0.72
LMNA-220ENST00000504687 YIF1AO95070 293 aa10.54□□□□□ -0.72
LMNA-220ENST00000504687 CNIH1O95406 144 aa10.54□□□□□ -0.72
LMNA-220ENST00000504687 AREGP15514 252 aa10.54□□□□□ -0.72
LMNA-220ENST00000504687 MFAP2P55001 183 aa10.54□□□□□ -0.72
LMNA-220ENST00000504687 SELENOTP62341 195 aa10.54□□□□□ -0.72
LMNA-220ENST00000504687 CX3CL1P78423 397 aa10.54□□□□□ -0.72
LMNA-220ENST00000504687 HNF4GQ14541 408 aa10.54□□□□□ -0.72
LMNA-220ENST00000504687 FBLN7Q53RD9 439 aa10.54□□□□□ -0.72
LMNA-220ENST00000504687 ZNF506Q5JVG8 444 aa10.54□□□□□ -0.72
LMNA-220ENST00000504687 Q5PR19 223 aa10.54□□□□□ -0.72
LMNA-220ENST00000504687 TTC9CQ8N5M4 171 aa10.54□□□□□ -0.72
LMNA-220ENST00000504687 SLC39A9Q9NUM3 307 aa10.54□□□□□ -0.72
LMNA-220ENST00000504687 IGKV1OR2-108A0A075B7D4 117 aa10.53□□□□□ -0.72
LMNA-220ENST00000504687 MAP1LC3B2A6NCE7 125 aa10.53□□□□□ -0.72
LMNA-220ENST00000504687 RBFOX3A6NFN3 312 aa10.53□□□□□ -0.72
LMNA-220ENST00000504687 FSHBP01225 129 aa10.53□□□□□ -0.72
LMNA-220ENST00000504687 FBP1P09467 338 aa10.53□□□□□ -0.72
LMNA-220ENST00000504687 LINC00869P0C866 280 aa10.53□□□□□ -0.72
LMNA-220ENST00000504687 CRIP2P52943 208 aaPredicted RBP10.53□□□□□ -0.72
LMNA-220ENST00000504687 ELLP55199 621 aaPredicted RBP10.53□□□□□ -0.72
LMNA-220ENST00000504687 GNB1P62873 340 aa10.53□□□□□ -0.72
LMNA-220ENST00000504687 SRSF3P84103 164 aaKnown RBP10.53□□□□□ -0.72
LMNA-220ENST00000504687 KHDC3LQ587J8 217 aa10.53□□□□□ -0.72
LMNA-220ENST00000504687 KLF17Q5JT82 389 aaPredicted RBP10.53□□□□□ -0.72
LMNA-220ENST00000504687 C16orf82Q7Z2V1 217 aa10.53□□□□□ -0.72
LMNA-220ENST00000504687 CCDC28AQ8IWP9 274 aa10.53□□□□□ -0.72
LMNA-220ENST00000504687 STPG3Q8N7X2 389 aa10.53□□□□□ -0.72
LMNA-220ENST00000504687 PIFOQ8TCI5 191 aa10.53□□□□□ -0.72
LMNA-220ENST00000504687 SSMEM1Q8WWF3 244 aa10.53□□□□□ -0.72
LMNA-220ENST00000504687 ARPC1AQ92747 370 aa10.53□□□□□ -0.72
LMNA-220ENST00000504687 RBM14Q96PK6 669 aaKnown RBP10.53□□□□□ -0.72
LMNA-220ENST00000504687 MAP1LC3BQ9GZQ8 125 aa10.53□□□□□ -0.72
LMNA-220ENST00000504687 CR1P17927 2039 aa10.53□□□□□ -0.72
LMNA-220ENST00000504687 WNK2Q9Y3S1 2297 aa10.53□□□□□ -0.72
LMNA-220ENST00000504687 IGHV7-81A0A0B4J1V7 117 aa10.52□□□□□ -0.73
LMNA-220ENST00000504687 CYSRT1A8MQ03 144 aa10.52□□□□□ -0.73
LMNA-220ENST00000504687 HSPB1P04792 205 aaKnown RBP10.52□□□□□ -0.73
LMNA-220ENST00000504687 IGHV4-31P0DP07 118 aa10.52□□□□□ -0.73
LMNA-220ENST00000504687 IGHV4-38-2P0DP08 117 aa10.52□□□□□ -0.73
LMNA-220ENST00000504687 CD24P25063 80 aa10.52□□□□□ -0.73
LMNA-220ENST00000504687 CDC34P49427 236 aaPredicted RBP10.52□□□□□ -0.73
LMNA-220ENST00000504687 PPT1P50897 306 aa10.52□□□□□ -0.73
LMNA-220ENST00000504687 B2MP61769 119 aa10.52□□□□□ -0.73
LMNA-220ENST00000504687 CCL20P78556 96 aa10.52□□□□□ -0.73
LMNA-220ENST00000504687 FAM120AOSQ5T036 256 aa10.52□□□□□ -0.73
LMNA-220ENST00000504687 MIC13Q5XKP0 118 aa10.52□□□□□ -0.73
LMNA-220ENST00000504687 C9orf139Q6ZV77 190 aa10.52□□□□□ -0.73
LMNA-220ENST00000504687 C22orf15Q8WYQ4 148 aa10.52□□□□□ -0.73
LMNA-220ENST00000504687 RAB24Q969Q5 203 aa10.52□□□□□ -0.73
LMNA-220ENST00000504687 ZNF48Q96MX3 618 aaPredicted RBP10.52□□□□□ -0.73
LMNA-220ENST00000504687 RNF2Q99496 336 aa10.52□□□□□ -0.73
LMNA-220ENST00000504687 TRGV9Q99603 122 aa10.52□□□□□ -0.73
LMNA-220ENST00000504687 RASL11BQ9BPW5 248 aa10.52□□□□□ -0.73
LMNA-220ENST00000504687 TREM1Q9NP99 234 aa10.52□□□□□ -0.73
LMNA-220ENST00000504687 DMRT1Q9Y5R6 373 aa10.52□□□□□ -0.73
LMNA-220ENST00000504687 CELSR2Q9HCU4 2923 aa10.51□□□□□ -0.73
LMNA-220ENST00000504687 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.51□□□□□ -0.731e-7■■■■□ 21.8
LMNA-220ENST00000504687 PRRC2AP48634 2157 aaKnown RBP10.51□□□□□ -0.73
LMNA-220ENST00000504687 A0A0U1RQK1 487 aa10.51□□□□□ -0.73
LMNA-220ENST00000504687 TCRBV4S1A1TA0A5B7 111 aa10.51□□□□□ -0.73
LMNA-220ENST00000504687 NCBP2LA6PVI3 153 aaKnown RBP10.51□□□□□ -0.73
LMNA-220ENST00000504687 I3L2K1 104 aa10.51□□□□□ -0.73
LMNA-220ENST00000504687 IFNA1P01562 189 aa10.51□□□□□ -0.73
LMNA-220ENST00000504687 EGR2P11161 476 aaPredicted RBP10.51□□□□□ -0.73
LMNA-220ENST00000504687 PAX6P26367 422 aa10.51□□□□□ -0.73
LMNA-220ENST00000504687 PSMB3P49720 205 aa10.51□□□□□ -0.73
LMNA-220ENST00000504687 RHOBP62745 196 aa10.51□□□□□ -0.73
LMNA-220ENST00000504687 ASPHD1Q5U4P2 390 aa10.51□□□□□ -0.73
LMNA-220ENST00000504687 RUSC1-AS1Q66K80 236 aa10.51□□□□□ -0.73
LMNA-220ENST00000504687 RBMS3Q6XE24 437 aaKnown RBP10.51□□□□□ -0.73
LMNA-220ENST00000504687 CYP2G1PQ6ZSU1 146 aa10.51□□□□□ -0.73
LMNA-220ENST00000504687 SSX7Q7RTT5 188 aa10.51□□□□□ -0.73
LMNA-220ENST00000504687 C5orf56Q8N8D9 126 aa10.51□□□□□ -0.73
LMNA-220ENST00000504687 OR4X1Q8NH49 305 aa10.51□□□□□ -0.73
LMNA-220ENST00000504687 SGMS2Q8NHU3 365 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms