RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 RAB24Q969Q5 203 aa17.55■□□□□ 0.4
PTPN13-205ENST00000502971 GNG13Q9P2W3 67 aa17.55■□□□□ 0.4
PTPN13-205ENST00000502971 HECTD1Q9ULT8 2610 aa17.55■□□□□ 0.4
PTPN13-205ENST00000502971 LOC102723971A0A1B0GUV8 181 aa17.55■□□□□ 0.4
PTPN13-205ENST00000502971 NPFFO15130 113 aa17.55■□□□□ 0.4
PTPN13-205ENST00000502971 IFNA1P01562 189 aa17.55■□□□□ 0.4
PTPN13-205ENST00000502971 HSPB1P04792 205 aaKnown RBP17.55■□□□□ 0.4
PTPN13-205ENST00000502971 SLC25A16P16260 332 aa17.55■□□□□ 0.4
PTPN13-205ENST00000502971 CD24P25063 80 aa17.55■□□□□ 0.4
PTPN13-205ENST00000502971 PAX6P26367 422 aa17.55■□□□□ 0.4
PTPN13-205ENST00000502971 ICAM4Q14773 271 aa17.55■□□□□ 0.4
PTPN13-205ENST00000502971 GUCA2BQ16661 112 aa17.55■□□□□ 0.4
PTPN13-205ENST00000502971 C5orf64Q2M2E5 130 aa17.55■□□□□ 0.4
PTPN13-205ENST00000502971 STPG3Q8N7X2 389 aa17.55■□□□□ 0.4
PTPN13-205ENST00000502971 AJUBAQ96IF1 538 aa17.55■□□□□ 0.4
PTPN13-205ENST00000502971 CENPVL3A0A0U1RRI6 287 aa17.54■□□□□ 0.4
PTPN13-205ENST00000502971 CORTO00230 105 aa17.54■□□□□ 0.4
PTPN13-205ENST00000502971 SNAPINO95295 136 aa17.54■□□□□ 0.4
PTPN13-205ENST00000502971 REG1AP05451 166 aa17.54■□□□□ 0.4
PTPN13-205ENST00000502971 AREGP15514 252 aa17.54■□□□□ 0.4
PTPN13-205ENST00000502971 BRS3P32247 399 aa17.54■□□□□ 0.4
PTPN13-205ENST00000502971 SAA4P35542 130 aa17.54■□□□□ 0.4
PTPN13-205ENST00000502971 PRR20EP86478 221 aa17.54■□□□□ 0.4
PTPN13-205ENST00000502971 PRR20CP86479 221 aa17.54■□□□□ 0.4
PTPN13-205ENST00000502971 PRR20DP86480 221 aa17.54■□□□□ 0.4
PTPN13-205ENST00000502971 PRR20BP86481 221 aa17.54■□□□□ 0.4
PTPN13-205ENST00000502971 PRR20AP86496 221 aa17.54■□□□□ 0.4
PTPN13-205ENST00000502971 MLANAQ16655 118 aa17.54■□□□□ 0.4
PTPN13-205ENST00000502971 ETFRF1Q6IPR1 90 aa17.54■□□□□ 0.4
PTPN13-205ENST00000502971 OR1P1Q8NH06 330 aa17.54■□□□□ 0.4
PTPN13-205ENST00000502971 SSMEM1Q8WWF3 244 aa17.54■□□□□ 0.4
PTPN13-205ENST00000502971 SLC45A2Q9UMX9 530 aa17.54■□□□□ 0.4
PTPN13-205ENST00000502971 FLNBO75369 2602 aaKnown RBP17.53■□□□□ 0.4
PTPN13-205ENST00000502971 FBN2P35556 2912 aa17.53■□□□□ 0.4
PTPN13-205ENST00000502971 A0A1W2PPV4 95 aa17.53■□□□□ 0.4
PTPN13-205ENST00000502971 CNIH1O95406 144 aa17.53■□□□□ 0.4
PTPN13-205ENST00000502971 FAM106CPP0CH98 169 aa17.53■□□□□ 0.4
PTPN13-205ENST00000502971 BCL2P10415 239 aa17.53■□□□□ 0.4
PTPN13-205ENST00000502971 KRTAP10-9P60411 292 aa17.53■□□□□ 0.4
PTPN13-205ENST00000502971 CLEC12BQ2HXU8 276 aa17.53■□□□□ 0.4
PTPN13-205ENST00000502971 ATRAIDQ6UW56 229 aa17.53■□□□□ 0.4
PTPN13-205ENST00000502971 NKX6-2Q9C056 277 aaPredicted RBP17.53■□□□□ 0.4
PTPN13-205ENST00000502971 BEX4Q9NWD9 120 aaPredicted RBP17.53■□□□□ 0.4
PTPN13-205ENST00000502971 TSPAN9O75954 239 aa17.52■□□□□ 0.4
PTPN13-205ENST00000502971 TMEM249Q2WGJ8 235 aa17.52■□□□□ 0.4
PTPN13-205ENST00000502971 RBMS3Q6XE24 437 aaKnown RBP17.52■□□□□ 0.4
PTPN13-205ENST00000502971 FNDC4Q9H6D8 234 aaPredicted RBP17.52■□□□□ 0.4
PTPN13-205ENST00000502971 F11RQ9Y624 299 aaKnown RBP17.52■□□□□ 0.4
PTPN13-205ENST00000502971 SRP19P09132 144 aaKnown RBP17.52■□□□□ 0.39
PTPN13-205ENST00000502971 TMEM11P17152 192 aa17.52■□□□□ 0.39
PTPN13-205ENST00000502971 GCSAMLQ5JQS6 135 aa17.52■□□□□ 0.39
PTPN13-205ENST00000502971 OR2T6Q8NHC8 308 aa17.52■□□□□ 0.39
PTPN13-205ENST00000502971 RXFP4Q8TDU9 374 aa17.52■□□□□ 0.39
PTPN13-205ENST00000502971 IGKV1OR2-108A0A075B7D4 117 aa17.51■□□□□ 0.39
PTPN13-205ENST00000502971 ZFP92A6NM28 416 aa17.51■□□□□ 0.39
PTPN13-205ENST00000502971 MSMBP08118 114 aa17.51■□□□□ 0.39
PTPN13-205ENST00000502971 LINC00869P0C866 280 aa17.51■□□□□ 0.39
PTPN13-205ENST00000502971 OR10J1P30954 320 aa17.51■□□□□ 0.39
PTPN13-205ENST00000502971 TAGLN2P37802 199 aaKnown RBP17.51■□□□□ 0.39
PTPN13-205ENST00000502971 FBLN7Q53RD9 439 aa17.51■□□□□ 0.39
PTPN13-205ENST00000502971 C1RLQ9NZP8 487 aa17.51■□□□□ 0.39
PTPN13-205ENST00000502971 VAX2Q9UIW0 290 aa17.51■□□□□ 0.39
PTPN13-205ENST00000502971 HMGB3O15347 200 aaKnown RBP17.5■□□□□ 0.39
PTPN13-205ENST00000502971 CRYGCP07315 174 aa17.5■□□□□ 0.39
PTPN13-205ENST00000502971 FXYD3Q14802 87 aa17.5■□□□□ 0.39
PTPN13-205ENST00000502971 HIST2H2BCQ6DN03 193 aa17.5■□□□□ 0.39
PTPN13-205ENST00000502971 LRRC75A-AS1Q8N1F1 130 aa17.5■□□□□ 0.39
PTPN13-205ENST00000502971 PIP4P2Q8N4L2 257 aa17.5■□□□□ 0.39
PTPN13-205ENST00000502971 MBD6Q96DN6 1003 aa17.5■□□□□ 0.39
PTPN13-205ENST00000502971 ACY3Q96HD9 319 aa17.5■□□□□ 0.39
PTPN13-205ENST00000502971 IGHV1-69DA0A0B4J2H0 117 aa17.5■□□□□ 0.39
PTPN13-205ENST00000502971 NCBP2LA6PVI3 153 aaKnown RBP17.5■□□□□ 0.39
PTPN13-205ENST00000502971 B4DSR2 109 aa17.5■□□□□ 0.39
PTPN13-205ENST00000502971 EIF3GO75821 320 aaKnown RBP eCLIP17.5■□□□□ 0.39
PTPN13-205ENST00000502971 IGHV1-69P01742 117 aa17.5■□□□□ 0.39
PTPN13-205ENST00000502971 MFAP2P55001 183 aa17.5■□□□□ 0.39
PTPN13-205ENST00000502971 SOHLH1Q5JUK2 328 aa17.5■□□□□ 0.39
PTPN13-205ENST00000502971 ZNF562Q6V9R5 426 aa17.5■□□□□ 0.39
PTPN13-205ENST00000502971 THAP8Q8NA92 274 aa17.5■□□□□ 0.39
PTPN13-205ENST00000502971 ABHD5Q8WTS1 349 aa17.5■□□□□ 0.39
PTPN13-205ENST00000502971 MISP3Q96FF7 219 aa17.5■□□□□ 0.39
PTPN13-205ENST00000502971 MANBALQ9NQG1 85 aa17.5■□□□□ 0.39
PTPN13-205ENST00000502971 ASH1LQ9NR48 2969 aaKnown RBP17.49■□□□□ 0.39
PTPN13-205ENST00000502971 RHOBP62745 196 aa17.49■□□□□ 0.39
PTPN13-205ENST00000502971 BTN1A1Q13410 526 aa17.49■□□□□ 0.39
PTPN13-205ENST00000502971 SLC35E3Q7Z769 313 aa17.49■□□□□ 0.39
PTPN13-205ENST00000502971 APELAP0DMC3 54 aa17.48■□□□□ 0.39
PTPN13-205ENST00000502971 PSMB3P49720 205 aa17.48■□□□□ 0.39
PTPN13-205ENST00000502971 DEFB113Q30KQ7 82 aa17.48■□□□□ 0.39
PTPN13-205ENST00000502971 CYP2G1PQ6ZSU1 146 aa17.48■□□□□ 0.39
PTPN13-205ENST00000502971 OR1L6Q8NGR2 347 aa17.48■□□□□ 0.39
PTPN13-205ENST00000502971 NPIPB3Q92617 1050 aa17.48■□□□□ 0.39
PTPN13-205ENST00000502971 C19orf24Q9BVV8 132 aa17.48■□□□□ 0.39
PTPN13-205ENST00000502971 ABCA12Q86UK0 2595 aa17.48■□□□□ 0.39
PTPN13-205ENST00000502971 NDUFS6O75380 124 aaKnown RBP17.47■□□□□ 0.39
PTPN13-205ENST00000502971 STAG3L2P0CL84 134 aa17.47■□□□□ 0.39
PTPN13-205ENST00000502971 STAG3L3P0CL85 134 aa17.47■□□□□ 0.39
PTPN13-205ENST00000502971 DEFA4P12838 97 aa17.47■□□□□ 0.39
PTPN13-205ENST00000502971 CLRN3Q8NCR9 226 aa17.47■□□□□ 0.39
PTPN13-205ENST00000502971 C22orf15Q8WYQ4 148 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms