RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 MND1Q9BWT6 205 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 RNASE7Q9H1E1 156 aaKnown RBP3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 OR51I2Q9H344 312 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 WFDC1Q9HC57 220 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 PARP11Q9NR21 331 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 SSR3Q9UNL2 185 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 ZNF443Q9Y2A4 671 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 WSB1Q9Y6I7 421 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 CROCCQ5TZA2 2017 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 ABCA12Q86UK0 2595 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 SPTBP11277 2137 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 IGLV3-12A0A075B6K2 115 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 A0A087WUU8 490 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 IGHV2-26A0A0B4J1V2 119 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 ZNF860A6NHJ4 632 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 CPSF4LA6NMK7 179 aaKnown RBP3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 KLLNB2CW77 178 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 EPM2AB3EWF7 344 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 M0QZK8 103 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 EIF1BO60739 113 aaKnown RBP3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 GABARAPO95166 117 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 NDUFB2O95178 105 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 MT-CO2P00403 227 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 IGHV3-23P01764 117 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 TTRP02766 147 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 HLA-DPB1P04440 258 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 TSPAN19P0C672 248 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 PIPP12273 146 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 IFI30P13284 250 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 ZBTB25P24278 435 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 GADD45AP24522 165 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 CD34P28906 385 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 S100A7P31151 101 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 POLR2HP52434 150 aaKnown RBP3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 HERVK_113P61574 105 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 RHOBP62745 196 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 RAP1AP62834 184 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 HLA-DRB3P79483 266 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 PLCXD2Q0VAA5 305 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 SURF2Q15527 256 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 LINC00303Q3SY05 128 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 FAM201AQ5SY85 155 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 MRPL2Q5T653 305 aaKnown RBP3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 FAM78BQ5VT40 261 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 CEMP1Q6PRD7 247 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 SLC16A13Q7RTY0 426 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 GRINAQ7Z429 371 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 ATP5L2Q7Z4Y8 100 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 MDP1Q86V88 176 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 RPS19BP1Q86WX3 136 aaKnown RBP3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 CLVS1Q8IUQ0 354 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 ACBD7Q8N6N7 88 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 ZNF645Q8N7E2 425 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 ZNF615Q8N8J6 731 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 ZIC4Q8N9L1 334 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 C9orf106Q8NAJ2 232 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 OR2K2Q8NGT1 345 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 OR2T27Q8NH04 317 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 C15orf40Q8WUR7 153 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 TIMM17AQ99595 171 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 TSSK6Q9BXA6 273 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 ULBP3Q9BZM4 244 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 HMG20AQ9NP66 347 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 TMEM138Q9NPI0 162 aa3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 MRPL27Q9P0M9 148 aaKnown RBP3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 PAIP2BQ9ULR5 123 aaKnown RBP3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 ZNF706Q9Y5V0 76 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 TET2Q6N021 2002 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 SPTBN1Q01082 2364 aaKnown RBP3.14□□□□□ -1.91
HMGB1P21-201ENST00000502313 FBN2P35556 2912 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 DCHS2Q6V1P9 2916 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 NUP214P35658 2090 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 HIVEP3Q5T1R4 2406 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 CRYBG3Q68DQ2 2970 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 VPS13CQ709C8 3753 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 TRAV36DV7A0A075B6V5 113 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 ZNF705GA8MUZ8 300 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 INMT-MINDY4F8WBC2 141 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 DNASE2O00115 360 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 SS18L1O75177 396 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 KLF7O75840 302 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 MMP23AO75900 390 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 TNFSF15O95150 251 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 IGLV2-8P01709 118 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 APOC1P02654 83 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 STATHP02808 62 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 OPN1SWP03999 348 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 IGKV3-11P04433 115 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 FBP1P09467 338 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 CECR9P0C854 216 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 SULT1A3P0DMM9 295 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 SULT1A4P0DMN0 295 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 CTLA4P16410 223 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 ZNF823P16415 610 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 RPS4Y1P22090 263 aaKnown RBP3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 CCL1P22362 96 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 IL3RAP26951 378 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 RBMXP38159 391 aaKnown RBP3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 RAB2AP61019 212 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 DAD1P61803 113 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms