RNA–Protein interactions for RNA: ENST00000502187.5

LINC01550-202, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,455 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-202ENST00000502187 ARL16Q0P5N6 197 aa7.18□□□□□ -1.26
LINC01550-202ENST00000502187 EXOSC2Q13868 293 aaKnown RBP7.18□□□□□ -1.26
LINC01550-202ENST00000502187 ETV3LQ6ZN32 361 aa7.18□□□□□ -1.26
LINC01550-202ENST00000502187 C9orf139Q6ZV77 190 aa7.18□□□□□ -1.26
LINC01550-202ENST00000502187 HAPLN4Q86UW8 402 aa7.18□□□□□ -1.26
LINC01550-202ENST00000502187 BAP18Q8IXM2 172 aa7.18□□□□□ -1.26
LINC01550-202ENST00000502187 BCL6BQ8N143 479 aaPredicted RBP7.18□□□□□ -1.26
LINC01550-202ENST00000502187 ABHD5Q8WTS1 349 aa7.18□□□□□ -1.26
LINC01550-202ENST00000502187 WFDC1Q9HC57 220 aa7.18□□□□□ -1.26
LINC01550-202ENST00000502187 MOB4Q9Y3A3 225 aa7.18□□□□□ -1.26
LINC01550-202ENST00000502187 MDFIC2A0A1B0GVS7 189 aa7.18□□□□□ -1.26
LINC01550-202ENST00000502187 A0A1B0GW64 132 aa7.18□□□□□ -1.26
LINC01550-202ENST00000502187 PMS2P5A8MQ11 134 aa7.18□□□□□ -1.26
LINC01550-202ENST00000502187 CFDP00746 253 aaPredicted RBP7.18□□□□□ -1.26
LINC01550-202ENST00000502187 IFNA4P05014 189 aa7.18□□□□□ -1.26
LINC01550-202ENST00000502187 OR13C7P0DN81 318 aa7.18□□□□□ -1.26
LINC01550-202ENST00000502187 ATP5IP56385 69 aaPredicted RBP7.18□□□□□ -1.26
LINC01550-202ENST00000502187 SSBP2P81877 361 aaPredicted RBP7.18□□□□□ -1.26
LINC01550-202ENST00000502187 WT1-ASQ06250 92 aa7.18□□□□□ -1.26
LINC01550-202ENST00000502187 FXYD3Q14802 87 aa7.18□□□□□ -1.26
LINC01550-202ENST00000502187 LY6EQ16553 131 aa7.18□□□□□ -1.26
LINC01550-202ENST00000502187 DEFB112Q30KQ8 113 aa7.18□□□□□ -1.26
LINC01550-202ENST00000502187 SLC25A24Q6NUK1 477 aa7.18□□□□□ -1.26
LINC01550-202ENST00000502187 CDPF1Q6NVV7 123 aa7.18□□□□□ -1.26
LINC01550-202ENST00000502187 HSD17B13Q7Z5P4 300 aaPredicted RBP7.18□□□□□ -1.26
LINC01550-202ENST00000502187 TMEM219Q86XT9 240 aa7.18□□□□□ -1.26
LINC01550-202ENST00000502187 UBAC2Q8NBM4 344 aa7.18□□□□□ -1.26
LINC01550-202ENST00000502187 ZNF680Q8NEM1 530 aa7.18□□□□□ -1.26
LINC01550-202ENST00000502187 PIFOQ8TCI5 191 aa7.18□□□□□ -1.26
LINC01550-202ENST00000502187 RBM14Q96PK6 669 aaKnown RBP7.18□□□□□ -1.26
LINC01550-202ENST00000502187 SLC25A32Q9H2D1 315 aa7.18□□□□□ -1.26
LINC01550-202ENST00000502187 PITPNC1Q9UKF7 332 aa7.18□□□□□ -1.26
LINC01550-202ENST00000502187 SONP18583 2426 aaKnown RBP7.17□□□□□ -1.26
LINC01550-202ENST00000502187 LOC102723971A0A1B0GUV8 181 aa7.17□□□□□ -1.26
LINC01550-202ENST00000502187 IGLC7A0M8Q6 106 aa7.17□□□□□ -1.26
LINC01550-202ENST00000502187 HLA-DRB1P01911 266 aa7.17□□□□□ -1.26
LINC01550-202ENST00000502187 RNASE2P10153 161 aaKnown RBP7.17□□□□□ -1.26
LINC01550-202ENST00000502187 SUB1P53999 127 aaKnown RBP eCLIP7.17□□□□□ -1.26
LINC01550-202ENST00000502187 KRTAP1-1Q07627 177 aa7.17□□□□□ -1.26
LINC01550-202ENST00000502187 ATP6V1FQ16864 119 aa7.17□□□□□ -1.26
LINC01550-202ENST00000502187 BSXQ3C1V8 233 aa7.17□□□□□ -1.26
LINC01550-202ENST00000502187 C2orf83Q53S99 150 aa7.17□□□□□ -1.26
LINC01550-202ENST00000502187 ALKAL2Q6UX46 152 aa7.17□□□□□ -1.26
LINC01550-202ENST00000502187 Q71RC1 249 aaPredicted RBP7.17□□□□□ -1.26
LINC01550-202ENST00000502187 TMEM116Q8NCL8 245 aa7.17□□□□□ -1.26
LINC01550-202ENST00000502187 TMEM170AQ8WVE7 144 aa7.17□□□□□ -1.26
LINC01550-202ENST00000502187 SSMEM1Q8WWF3 244 aa7.17□□□□□ -1.26
LINC01550-202ENST00000502187 ARPC1AQ92747 370 aa7.17□□□□□ -1.26
LINC01550-202ENST00000502187 UBQLN2Q9UHD9 624 aa7.17□□□□□ -1.26
LINC01550-202ENST00000502187 TEX22C9J3V5 150 aa7.17□□□□□ -1.26
LINC01550-202ENST00000502187 FGF16O43320 207 aa7.17□□□□□ -1.26
LINC01550-202ENST00000502187 LY6G6DO95868 133 aa7.17□□□□□ -1.26
LINC01550-202ENST00000502187 IFNA5P01569 189 aa7.17□□□□□ -1.26
LINC01550-202ENST00000502187 APELAP0DMC3 54 aa7.17□□□□□ -1.26
LINC01550-202ENST00000502187 CX3CL1P78423 397 aa7.17□□□□□ -1.26
LINC01550-202ENST00000502187 ZNF562Q6V9R5 426 aa7.17□□□□□ -1.26
LINC01550-202ENST00000502187 SPNS3Q6ZMD2 512 aa7.17□□□□□ -1.26
LINC01550-202ENST00000502187 SAT2Q96F10 170 aaPredicted RBP7.17□□□□□ -1.26
LINC01550-202ENST00000502187 PHYHIPLQ96FC7 376 aa7.17□□□□□ -1.26
LINC01550-202ENST00000502187 TXN2Q99757 166 aa7.17□□□□□ -1.26
LINC01550-202ENST00000502187 TMEM147Q9BVK8 224 aa7.17□□□□□ -1.26
LINC01550-202ENST00000502187 A6NDX4 124 aa7.16□□□□□ -1.26
LINC01550-202ENST00000502187 BTBD17A6NE02 478 aa7.16□□□□□ -1.26
LINC01550-202ENST00000502187 REG1AP05451 166 aa7.16□□□□□ -1.26
LINC01550-202ENST00000502187 AREGP15514 252 aa7.16□□□□□ -1.26
LINC01550-202ENST00000502187 EIF5AL1Q6IS14 154 aaKnown RBP7.16□□□□□ -1.26
LINC01550-202ENST00000502187 C5orf56Q8N8D9 126 aa7.16□□□□□ -1.26
LINC01550-202ENST00000502187 HSD17B11Q8NBQ5 300 aa7.16□□□□□ -1.26
LINC01550-202ENST00000502187 SCARB1Q8WTV0 552 aa7.16□□□□□ -1.26
LINC01550-202ENST00000502187 FAM103A1Q9BTL3 118 aaKnown RBP7.16□□□□□ -1.26
LINC01550-202ENST00000502187 UQCC1Q9NVA1 299 aa7.16□□□□□ -1.26
LINC01550-202ENST00000502187 SLC45A2Q9UMX9 530 aa7.16□□□□□ -1.26
LINC01550-202ENST00000502187 IGHV7-81A0A0B4J1V7 117 aa7.16□□□□□ -1.26
LINC01550-202ENST00000502187 UBE2L5PA0A1B0GUS4 154 aa7.16□□□□□ -1.26
LINC01550-202ENST00000502187 SRP14P37108 136 aaKnown RBP7.16□□□□□ -1.26
LINC01550-202ENST00000502187 DLK1P80370 383 aa7.16□□□□□ -1.26
LINC01550-202ENST00000502187 NDPQ00604 133 aa7.16□□□□□ -1.26
LINC01550-202ENST00000502187 C16orf82Q7Z2V1 217 aa7.16□□□□□ -1.26
LINC01550-202ENST00000502187 ZNF114Q8NC26 417 aa7.16□□□□□ -1.26
LINC01550-202ENST00000502187 OR5R1Q8NH85 324 aa7.16□□□□□ -1.26
LINC01550-202ENST00000502187 SCGB1C1Q8TD33 95 aa7.16□□□□□ -1.26
LINC01550-202ENST00000502187 P2RX4Q99571 388 aa7.16□□□□□ -1.26
LINC01550-202ENST00000502187 GINS3Q9BRX5 216 aa7.16□□□□□ -1.26
LINC01550-202ENST00000502187 HIVEP1P15822 2718 aa7.15□□□□□ -1.26
LINC01550-202ENST00000502187 SMCO3A2RU48 225 aa7.15□□□□□ -1.26
LINC01550-202ENST00000502187 PRSS46E5RG02 174 aa7.15□□□□□ -1.26
LINC01550-202ENST00000502187 M0QZK8 103 aa7.15□□□□□ -1.26
LINC01550-202ENST00000502187 TMED6Q8WW62 240 aa7.15□□□□□ -1.26
LINC01550-202ENST00000502187 GGACTQ9BVM4 153 aa7.15□□□□□ -1.26
LINC01550-202ENST00000502187 ARV1Q9H2C2 271 aa7.15□□□□□ -1.26
LINC01550-202ENST00000502187 ZMAT5Q9UDW3 170 aaKnown RBP7.15□□□□□ -1.26
LINC01550-202ENST00000502187 SH2D7A6NKC9 451 aaPredicted RBP7.15□□□□□ -1.27
LINC01550-202ENST00000502187 IGHV4-59P01825 116 aa7.15□□□□□ -1.27
LINC01550-202ENST00000502187 HNF1AP20823 631 aa7.15□□□□□ -1.27
LINC01550-202ENST00000502187 IER3P46695 156 aa7.15□□□□□ -1.27
LINC01550-202ENST00000502187 HSPB9Q9BQS6 159 aa7.15□□□□□ -1.27
LINC01550-202ENST00000502187 PARP11Q9NR21 331 aa7.15□□□□□ -1.27
LINC01550-202ENST00000502187 F11RQ9Y624 299 aaKnown RBP7.15□□□□□ -1.27
LINC01550-202ENST00000502187 MXRA5Q9NR99 2828 aa7.14□□□□□ -1.27
LINC01550-202ENST00000502187 ATP6V0CP27449 155 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms