RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 PDCD5O14737 125 aa11.12□□□□□ -0.63
HDAC6-236ENST00000498808 MT-CO2P00403 227 aa11.12□□□□□ -0.63
HDAC6-236ENST00000498808 MLLT11Q13015 90 aaPredicted RBP11.12□□□□□ -0.63
HDAC6-236ENST00000498808 ZNF818PQ6ZRF7 136 aa11.12□□□□□ -0.63
HDAC6-236ENST00000498808 STXBP6Q8NFX7 210 aa11.12□□□□□ -0.63
HDAC6-236ENST00000498808 C8orf4Q9NR00 106 aa11.12□□□□□ -0.63
HDAC6-236ENST00000498808 TRAV1-2A0A0B4J238 106 aa11.11□□□□□ -0.63
HDAC6-236ENST00000498808 GNG7O60262 68 aa11.11□□□□□ -0.63
HDAC6-236ENST00000498808 FXYD4P59646 89 aa11.11□□□□□ -0.63
HDAC6-236ENST00000498808 GNG2P59768 71 aa11.11□□□□□ -0.63
HDAC6-236ENST00000498808 ERVK-16P61578 105 aa11.11□□□□□ -0.63
HDAC6-236ENST00000498808 RCN1Q15293 331 aa11.11□□□□□ -0.63
HDAC6-236ENST00000498808 AADACL3Q5VUY0 350 aa11.11□□□□□ -0.63
HDAC6-236ENST00000498808 FAM210BQ96KR6 192 aa11.11□□□□□ -0.63
HDAC6-236ENST00000498808 ACOT13Q9NPJ3 140 aa11.11□□□□□ -0.63
HDAC6-236ENST00000498808 PUS1Q9Y606 427 aaKnown RBP eCLIP11.11□□□□□ -0.63
HDAC6-236ENST00000498808 ARPC4P59998 168 aa11.1□□□□□ -0.63
HDAC6-236ENST00000498808 ZNF367Q7RTV3 350 aa11.1□□□□□ -0.63
HDAC6-236ENST00000498808 BEST4Q8NFU0 473 aa11.1□□□□□ -0.63
HDAC6-236ENST00000498808 DCANP1Q8TF63 244 aa11.1□□□□□ -0.63
HDAC6-236ENST00000498808 TMEM56Q96MV1 263 aa11.1□□□□□ -0.63
HDAC6-236ENST00000498808 A0A1B0GU03 582 aa11.09□□□□□ -0.63
HDAC6-236ENST00000498808 KRASP01116 189 aa11.09□□□□□ -0.63
HDAC6-236ENST00000498808 SPART-AS1P0CW21 52 aa11.09□□□□□ -0.63
HDAC6-236ENST00000498808 RAB3BP20337 219 aa11.09□□□□□ -0.63
HDAC6-236ENST00000498808 TMEM231Q9H6L2 316 aa11.09□□□□□ -0.63
HDAC6-236ENST00000498808 XCL2Q9UBD3 114 aa11.09□□□□□ -0.63
HDAC6-236ENST00000498808 SMIM30A4D0T7 59 aa11.08□□□□□ -0.64
HDAC6-236ENST00000498808 SNAPC5O75971 98 aa11.08□□□□□ -0.64
HDAC6-236ENST00000498808 G6PCP35575 357 aa11.08□□□□□ -0.64
HDAC6-236ENST00000498808 ZNF600Q6ZNG1 722 aa11.08□□□□□ -0.64
HDAC6-236ENST00000498808 TMEM17Q86X19 198 aa11.08□□□□□ -0.64
HDAC6-236ENST00000498808 CADM3Q8N126 398 aa11.08□□□□□ -0.64
HDAC6-236ENST00000498808 ZNF114Q8NC26 417 aa11.08□□□□□ -0.64
HDAC6-236ENST00000498808 FCAMRQ8WWV6 532 aa11.08□□□□□ -0.64
HDAC6-236ENST00000498808 PINX1Q96BK5 328 aaKnown RBP11.08□□□□□ -0.64
HDAC6-236ENST00000498808 RAB40CQ96S21 281 aa11.08□□□□□ -0.64
HDAC6-236ENST00000498808 MGLLQ99685 303 aa11.08□□□□□ -0.64
HDAC6-236ENST00000498808 PRNDQ9UKY0 176 aa11.08□□□□□ -0.64
HDAC6-236ENST00000498808 CASQ2O14958 399 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-236ENST00000498808 RLN1P04808 185 aa11.07□□□□□ -0.64
HDAC6-236ENST00000498808 F2RP25116 425 aa11.07□□□□□ -0.64
HDAC6-236ENST00000498808 GNRHRP30968 328 aa11.07□□□□□ -0.64
HDAC6-236ENST00000498808 LPAR6P43657 344 aa11.07□□□□□ -0.64
HDAC6-236ENST00000498808 EMP1P54849 157 aa11.07□□□□□ -0.64
HDAC6-236ENST00000498808 ZNF705AQ6ZN79 300 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-236ENST00000498808 C1QTNF4Q9BXJ3 329 aa11.07□□□□□ -0.64
HDAC6-236ENST00000498808 CCDC90BQ9GZT6 254 aa11.07□□□□□ -0.64
HDAC6-236ENST00000498808 SCN3BQ9NY72 215 aa11.07□□□□□ -0.64
HDAC6-236ENST00000498808 FCER2P06734 321 aa11.06□□□□□ -0.64
HDAC6-236ENST00000498808 NPPCP23582 126 aa11.06□□□□□ -0.64
HDAC6-236ENST00000498808 MYL9P24844 172 aa11.06□□□□□ -0.64
HDAC6-236ENST00000498808 P2RY1P47900 373 aa11.06□□□□□ -0.64
HDAC6-236ENST00000498808 PSMG4Q5JS54 123 aa11.06□□□□□ -0.64
HDAC6-236ENST00000498808 HOGA1Q86XE5 327 aa11.06□□□□□ -0.64
HDAC6-236ENST00000498808 C6orf223Q8N319 242 aa11.06□□□□□ -0.64
HDAC6-236ENST00000498808 MOB3AQ96BX8 217 aa11.06□□□□□ -0.64
HDAC6-236ENST00000498808 NEU1Q99519 415 aa11.06□□□□□ -0.64
HDAC6-236ENST00000498808 DUSP21Q9H596 190 aa11.06□□□□□ -0.64
HDAC6-236ENST00000498808 FKBP11Q9NYL4 201 aa11.06□□□□□ -0.64
HDAC6-236ENST00000498808 DKK2Q9UBU2 259 aa11.06□□□□□ -0.64
HDAC6-236ENST00000498808 A0A1W2PS18 150 aa11.05□□□□□ -0.64
HDAC6-236ENST00000498808 ZNF705FA8MVS1 300 aaPredicted RBP11.05□□□□□ -0.64
HDAC6-236ENST00000498808 ZNF705DP0CH99 300 aaPredicted RBP11.05□□□□□ -0.64
HDAC6-236ENST00000498808 ZNF705BP0CI00 300 aaPredicted RBP11.05□□□□□ -0.64
HDAC6-236ENST00000498808 HTN3P15516 51 aa11.05□□□□□ -0.64
HDAC6-236ENST00000498808 CRYBB3P26998 211 aa11.05□□□□□ -0.64
HDAC6-236ENST00000498808 FGF9P31371 208 aaPredicted RBP11.05□□□□□ -0.64
HDAC6-236ENST00000498808 NPBWR1P48145 328 aa11.05□□□□□ -0.64
HDAC6-236ENST00000498808 PPP5CP53041 499 aa11.05□□□□□ -0.64
HDAC6-236ENST00000498808 TMEM88Q6PEY1 159 aa11.05□□□□□ -0.64
HDAC6-236ENST00000498808 TPRA1Q86W33 373 aa11.05□□□□□ -0.64
HDAC6-236ENST00000498808 YTHDF1Q9BYJ9 559 aaKnown RBP11.05□□□□□ -0.64
HDAC6-236ENST00000498808 RNF167Q9H6Y7 350 aa11.05□□□□□ -0.64
HDAC6-236ENST00000498808 NBDYA0A0U1RRE5 68 aa11.04□□□□□ -0.64
HDAC6-236ENST00000498808 TMEM189A5PLL7 270 aa11.04□□□□□ -0.64
HDAC6-236ENST00000498808 RGS10O43665 173 aa11.04□□□□□ -0.64
HDAC6-236ENST00000498808 PGLYRP1O75594 196 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-236ENST00000498808 SCGNO76038 276 aa11.04□□□□□ -0.64
HDAC6-236ENST00000498808 TMEM50AO95807 157 aa11.04□□□□□ -0.64
HDAC6-236ENST00000498808 FAM3BP58499 235 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-236ENST00000498808 NUTF2P61970 127 aaKnown RBP11.04□□□□□ -0.64
HDAC6-236ENST00000498808 FAM222AQ5U5X8 452 aa11.04□□□□□ -0.64
HDAC6-236ENST00000498808 SPATA12Q7Z6I5 190 aa11.04□□□□□ -0.64
HDAC6-236ENST00000498808 METTL26Q96S19 204 aa11.04□□□□□ -0.64
HDAC6-236ENST00000498808 NIPSNAP3BQ9BS92 247 aa11.04□□□□□ -0.64
HDAC6-236ENST00000498808 HELTA6NFD8 242 aa11.03□□□□□ -0.64
HDAC6-236ENST00000498808 H3BMM0 161 aa11.03□□□□□ -0.64
HDAC6-236ENST00000498808 PRCDQ00LT1 54 aa11.03□□□□□ -0.64
HDAC6-236ENST00000498808 DHRS2Q13268 280 aa11.03□□□□□ -0.64
HDAC6-236ENST00000498808 OGFRL1Q5TC84 451 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-236ENST00000498808 TSC22D3Q99576 134 aa11.03□□□□□ -0.64
HDAC6-236ENST00000498808 TRDV1A0A1B0GX56 115 aa11.02□□□□□ -0.65
HDAC6-236ENST00000498808 HERV-K104P61576 105 aa11.02□□□□□ -0.65
HDAC6-236ENST00000498808 KCTD21Q4G0X4 260 aa11.02□□□□□ -0.65
HDAC6-236ENST00000498808 C22orf42Q6IC83 251 aa11.02□□□□□ -0.65
HDAC6-236ENST00000498808 ZNRF2Q8NHG8 242 aa11.02□□□□□ -0.65
HDAC6-236ENST00000498808 LGALS14Q8TCE9 139 aa11.02□□□□□ -0.65
HDAC6-236ENST00000498808 MRPL36Q9P0J6 103 aaKnown RBP11.02□□□□□ -0.65
HDAC6-236ENST00000498808 TPRKBQ9Y3C4 175 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms