RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 SNAPC5O75971 98 aa6.53□□□□□ -1.36
CCDC171-209ENST00000498725 MT-CO2P00403 227 aa6.53□□□□□ -1.36
CCDC171-209ENST00000498725 KRASP01116 189 aa6.53□□□□□ -1.36
CCDC171-209ENST00000498725 PPYP01298 95 aa6.53□□□□□ -1.36
CCDC171-209ENST00000498725 RAB3BP20337 219 aa6.53□□□□□ -1.36
CCDC171-209ENST00000498725 MYL9P24844 172 aa6.53□□□□□ -1.36
CCDC171-209ENST00000498725 G6PCP35575 357 aa6.53□□□□□ -1.36
CCDC171-209ENST00000498725 RCN1Q15293 331 aa6.53□□□□□ -1.36
CCDC171-209ENST00000498725 POU2AF1Q16633 256 aa6.53□□□□□ -1.36
CCDC171-209ENST00000498725 THOC7Q6I9Y2 204 aaKnown RBP6.53□□□□□ -1.36
CCDC171-209ENST00000498725 TOMM20LQ6UXN7 152 aa6.53□□□□□ -1.36
CCDC171-209ENST00000498725 ZNF818PQ6ZRF7 136 aa6.53□□□□□ -1.36
CCDC171-209ENST00000498725 HSD17B13Q7Z5P4 300 aaPredicted RBP6.53□□□□□ -1.36
CCDC171-209ENST00000498725 Q8N1X5 172 aa6.53□□□□□ -1.36
CCDC171-209ENST00000498725 MOB3AQ96BX8 217 aa6.53□□□□□ -1.36
CCDC171-209ENST00000498725 ATP6V0BQ99437 205 aa6.53□□□□□ -1.36
CCDC171-209ENST00000498725 SCN3BQ9NY72 215 aa6.53□□□□□ -1.36
CCDC171-209ENST00000498725 XCL2Q9UBD3 114 aa6.53□□□□□ -1.36
CCDC171-209ENST00000498725 PUS1Q9Y606 427 aaKnown RBP eCLIP6.53□□□□□ -1.36
CCDC171-209ENST00000498725 IGHV3OR16-12A0A075B7B8 117 aa6.52□□□□□ -1.37
CCDC171-209ENST00000498725 ERICH4A6NGS2 130 aa6.52□□□□□ -1.37
CCDC171-209ENST00000498725 DBX1A6NMT0 343 aa6.52□□□□□ -1.37
CCDC171-209ENST00000498725 MARCH11A6NNE9 402 aa6.52□□□□□ -1.37
CCDC171-209ENST00000498725 I3L2K1 104 aa6.52□□□□□ -1.37
CCDC171-209ENST00000498725 K7EQG2 157 aa6.52□□□□□ -1.37
CCDC171-209ENST00000498725 CD74P04233 296 aa6.52□□□□□ -1.37
CCDC171-209ENST00000498725 RLN1P04808 185 aa6.52□□□□□ -1.37
CCDC171-209ENST00000498725 PSMA1P25786 263 aaKnown RBP6.52□□□□□ -1.37
CCDC171-209ENST00000498725 LPAR6P43657 344 aa6.52□□□□□ -1.37
CCDC171-209ENST00000498725 ARL6IP1Q15041 203 aa6.52□□□□□ -1.37
CCDC171-209ENST00000498725 TMEM41BQ5BJD5 291 aa6.52□□□□□ -1.37
CCDC171-209ENST00000498725 TPRA1Q86W33 373 aa6.52□□□□□ -1.37
CCDC171-209ENST00000498725 PACRGLQ8N7B6 248 aa6.52□□□□□ -1.37
CCDC171-209ENST00000498725 CSNK1G2-AS1Q8NCQ2 148 aa6.52□□□□□ -1.37
CCDC171-209ENST00000498725 BEST4Q8NFU0 473 aa6.52□□□□□ -1.37
CCDC171-209ENST00000498725 TSPAN14Q8NG11 270 aa6.52□□□□□ -1.37
CCDC171-209ENST00000498725 TMEM56Q96MV1 263 aa6.52□□□□□ -1.37
CCDC171-209ENST00000498725 VSIRQ9H7M9 311 aa6.52□□□□□ -1.37
CCDC171-209ENST00000498725 PLEKHA2Q9HB19 425 aa6.52□□□□□ -1.37
CCDC171-209ENST00000498725 ACOT13Q9NPJ3 140 aa6.52□□□□□ -1.37
CCDC171-209ENST00000498725 MEIS3P1A6NDR6 274 aa6.51□□□□□ -1.37
CCDC171-209ENST00000498725 CASQ2O14958 399 aaPredicted RBP6.51□□□□□ -1.37
CCDC171-209ENST00000498725 CD5P06127 495 aa6.51□□□□□ -1.37
CCDC171-209ENST00000498725 PPP5CP53041 499 aa6.51□□□□□ -1.37
CCDC171-209ENST00000498725 FXYD7P58549 80 aa6.51□□□□□ -1.37
CCDC171-209ENST00000498725 MLLT11Q13015 90 aaPredicted RBP6.51□□□□□ -1.37
CCDC171-209ENST00000498725 SPINK9Q5DT21 86 aa6.51□□□□□ -1.37
CCDC171-209ENST00000498725 PSMG4Q5JS54 123 aa6.51□□□□□ -1.37
CCDC171-209ENST00000498725 ZBTB34Q8NCN2 500 aa6.51□□□□□ -1.37
CCDC171-209ENST00000498725 MGLLQ99685 303 aa6.51□□□□□ -1.37
CCDC171-209ENST00000498725 TXN2Q99757 166 aa6.51□□□□□ -1.37
CCDC171-209ENST00000498725 TMEM231Q9H6L2 316 aa6.51□□□□□ -1.37
CCDC171-209ENST00000498725 COMMD9Q9P000 198 aa6.51□□□□□ -1.37
CCDC171-209ENST00000498725 TRAV2A0A0B4J234 112 aa6.5□□□□□ -1.37
CCDC171-209ENST00000498725 TRAV1-2A0A0B4J238 106 aa6.5□□□□□ -1.37
CCDC171-209ENST00000498725 A0A1B0GU03 582 aa6.5□□□□□ -1.37
CCDC171-209ENST00000498725 RGS10O43665 173 aa6.5□□□□□ -1.37
CCDC171-209ENST00000498725 IGKV3-20P01619 116 aa6.5□□□□□ -1.37
CCDC171-209ENST00000498725 SPART-AS1P0CW21 52 aa6.5□□□□□ -1.37
CCDC171-209ENST00000498725 NPPCP23582 126 aa6.5□□□□□ -1.37
CCDC171-209ENST00000498725 P2RY1P47900 373 aa6.5□□□□□ -1.37
CCDC171-209ENST00000498725 HERV-K104P61576 105 aa6.5□□□□□ -1.37
CCDC171-209ENST00000498725 DHRS2Q13268 280 aa6.5□□□□□ -1.37
CCDC171-209ENST00000498725 C22orf42Q6IC83 251 aa6.5□□□□□ -1.37
CCDC171-209ENST00000498725 ZNF600Q6ZNG1 722 aa6.5□□□□□ -1.37
CCDC171-209ENST00000498725 OR1P1Q8NH06 330 aa6.5□□□□□ -1.37
CCDC171-209ENST00000498725 FCAMRQ8WWV6 532 aa6.5□□□□□ -1.37
CCDC171-209ENST00000498725 RAB40CQ96S21 281 aa6.5□□□□□ -1.37
CCDC171-209ENST00000498725 TRAV18A0A075B6X5 111 aa6.49□□□□□ -1.37
CCDC171-209ENST00000498725 F2RP25116 425 aa6.49□□□□□ -1.37
CCDC171-209ENST00000498725 MSMO1Q15800 293 aa6.49□□□□□ -1.37
CCDC171-209ENST00000498725 RNF212Q495C1 297 aa6.49□□□□□ -1.37
CCDC171-209ENST00000498725 TMEM88Q6PEY1 159 aa6.49□□□□□ -1.37
CCDC171-209ENST00000498725 LGALS14Q8TCE9 139 aa6.49□□□□□ -1.37
CCDC171-209ENST00000498725 GRAMD2BQ96HH9 432 aa6.49□□□□□ -1.37
CCDC171-209ENST00000498725 ATG101Q9BSB4 218 aa6.49□□□□□ -1.37
CCDC171-209ENST00000498725 C8orf4Q9NR00 106 aa6.49□□□□□ -1.37
CCDC171-209ENST00000498725 DAPK2Q9UIK4 370 aa6.49□□□□□ -1.37
CCDC171-209ENST00000498725 PRNDQ9UKY0 176 aa6.49□□□□□ -1.37
CCDC171-209ENST00000498725 TPRKBQ9Y3C4 175 aa6.49□□□□□ -1.37
CCDC171-209ENST00000498725 TMED3Q9Y3Q3 217 aa6.49□□□□□ -1.37
CCDC171-209ENST00000498725 A0A1W2PS18 150 aa6.48□□□□□ -1.37
CCDC171-209ENST00000498725 HELTA6NFD8 242 aa6.48□□□□□ -1.37
CCDC171-209ENST00000498725 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.48□□□□□ -1.37
CCDC171-209ENST00000498725 PGLYRP1O75594 196 aaPredicted RBP6.48□□□□□ -1.37
CCDC171-209ENST00000498725 TMEM50AO95807 157 aa6.48□□□□□ -1.37
CCDC171-209ENST00000498725 FGF2P09038 288 aa6.48□□□□□ -1.37
CCDC171-209ENST00000498725 GNRHRP30968 328 aa6.48□□□□□ -1.37
CCDC171-209ENST00000498725 NPBWR1P48145 328 aa6.48□□□□□ -1.37
CCDC171-209ENST00000498725 FAM222AQ5U5X8 452 aa6.48□□□□□ -1.37
CCDC171-209ENST00000498725 SPATA12Q7Z6I5 190 aa6.48□□□□□ -1.37
CCDC171-209ENST00000498725 HOGA1Q86XE5 327 aa6.48□□□□□ -1.37
CCDC171-209ENST00000498725 OR4A16Q8NH70 328 aa6.48□□□□□ -1.37
CCDC171-209ENST00000498725 DCANP1Q8TF63 244 aa6.48□□□□□ -1.37
CCDC171-209ENST00000498725 TMEM230Q96A57 120 aa6.48□□□□□ -1.37
CCDC171-209ENST00000498725 METTL26Q96S19 204 aa6.48□□□□□ -1.37
CCDC171-209ENST00000498725 NIPSNAP3BQ9BS92 247 aa6.48□□□□□ -1.37
CCDC171-209ENST00000498725 C1QTNF4Q9BXJ3 329 aa6.48□□□□□ -1.37
CCDC171-209ENST00000498725 FKBP11Q9NYL4 201 aa6.48□□□□□ -1.37
CCDC171-209ENST00000498725 EHFQ9NZC4 300 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms