RNA–Protein interactions for RNA: ENST00000498532.5

HDAC11-220, Transcript of histone deacetylase 11, humanhuman

TSL 4

Gene HDAC11, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-220ENST00000498532 EWSR1Q01844 656 aaKnown RBP eCLIP12.85□□□□□ -0.35
HDAC11-220ENST00000498532 RNASE12Q5GAN4 147 aaKnown RBP12.85□□□□□ -0.35
HDAC11-220ENST00000498532 RNASE10Q5GAN6 216 aaKnown RBP12.85□□□□□ -0.35
HDAC11-220ENST00000498532 APRG1Q8IVJ8 170 aa12.85□□□□□ -0.35
HDAC11-220ENST00000498532 LINC00476Q8WZB0 136 aa12.85□□□□□ -0.35
HDAC11-220ENST00000498532 RNF183Q96D59 192 aa12.85□□□□□ -0.35
HDAC11-220ENST00000498532 ZNF486Q96H40 463 aaPredicted RBP12.85□□□□□ -0.35
HDAC11-220ENST00000498532 ZNF414Q96IQ9 312 aa12.85□□□□□ -0.35
HDAC11-220ENST00000498532 MAP6D1Q9H9H5 199 aa12.85□□□□□ -0.35
HDAC11-220ENST00000498532 IGKV3-7A0A075B6H7 116 aa12.84□□□□□ -0.35
HDAC11-220ENST00000498532 TRAV14DV4A0A0A6YYC5 116 aa12.84□□□□□ -0.35
HDAC11-220ENST00000498532 PI3P19957 117 aa12.84□□□□□ -0.35
HDAC11-220ENST00000498532 AKR1C2P52895 323 aa12.84□□□□□ -0.35
HDAC11-220ENST00000498532 SPINK9Q5DT21 86 aa12.84□□□□□ -0.35
HDAC11-220ENST00000498532 MZT2AQ6P582 158 aa12.84□□□□□ -0.35
HDAC11-220ENST00000498532 TMEM217Q8N7C4 229 aa12.84□□□□□ -0.35
HDAC11-220ENST00000498532 SLC35G3Q8N808 338 aa12.84□□□□□ -0.35
HDAC11-220ENST00000498532 AP3S1Q92572 193 aa12.84□□□□□ -0.35
HDAC11-220ENST00000498532 GINS3Q9BRX5 216 aa12.84□□□□□ -0.35
HDAC11-220ENST00000498532 IGHV3OR16-13A0A075B7E8 117 aa12.83□□□□□ -0.36
HDAC11-220ENST00000498532 IGHV3-74A0A0B4J1X5 117 aa12.83□□□□□ -0.36
HDAC11-220ENST00000498532 SNCAP37840 140 aa12.83□□□□□ -0.36
HDAC11-220ENST00000498532 PIGPP57054 158 aa12.83□□□□□ -0.36
HDAC11-220ENST00000498532 RND3P61587 244 aa12.83□□□□□ -0.36
HDAC11-220ENST00000498532 IZUMO4Q1ZYL8 232 aa12.83□□□□□ -0.36
HDAC11-220ENST00000498532 ARRDC1Q8N5I2 433 aa12.83□□□□□ -0.36
HDAC11-220ENST00000498532 KLK11Q9UBX7 282 aa12.83□□□□□ -0.36
HDAC11-220ENST00000498532 ATG12O94817 140 aa12.82□□□□□ -0.36
HDAC11-220ENST00000498532 LY6G6CO95867 125 aa12.82□□□□□ -0.36
HDAC11-220ENST00000498532 IGKV1-5P01602 117 aa12.82□□□□□ -0.36
HDAC11-220ENST00000498532 CD3DP04234 171 aa12.82□□□□□ -0.36
HDAC11-220ENST00000498532 ATF4P18848 351 aaPredicted RBP12.82□□□□□ -0.36
HDAC11-220ENST00000498532 NPBWR1P48145 328 aa12.82□□□□□ -0.36
HDAC11-220ENST00000498532 CMC4P56277 68 aaPredicted RBP12.82□□□□□ -0.36
HDAC11-220ENST00000498532 ZNF124Q15973 351 aa12.82□□□□□ -0.36
HDAC11-220ENST00000498532 LHFPL1Q86WI0 220 aa12.82□□□□□ -0.36
HDAC11-220ENST00000498532 TP53RKQ96S44 253 aa12.82□□□□□ -0.36
HDAC11-220ENST00000498532 PDCD10Q9BUL8 212 aa12.82□□□□□ -0.36
HDAC11-220ENST00000498532 C3orf85A0A1B0GTC6 90 aa12.81□□□□□ -0.36
HDAC11-220ENST00000498532 IFNA17P01571 189 aa12.81□□□□□ -0.36
HDAC11-220ENST00000498532 CD5P06127 495 aa12.81□□□□□ -0.36
HDAC11-220ENST00000498532 TBPP20226 339 aa12.81□□□□□ -0.36
HDAC11-220ENST00000498532 PPP5CP53041 499 aa12.81□□□□□ -0.36
HDAC11-220ENST00000498532 PAFAH1B2P68402 229 aa12.81□□□□□ -0.36
HDAC11-220ENST00000498532 TRIM16LQ309B1 348 aa12.81□□□□□ -0.36
HDAC11-220ENST00000498532 CEMP1Q6PRD7 247 aaPredicted RBP12.81□□□□□ -0.36
HDAC11-220ENST00000498532 TOMM20LQ6UXN7 152 aa12.81□□□□□ -0.36
HDAC11-220ENST00000498532 GBGT1Q8N5D6 347 aa12.81□□□□□ -0.36
HDAC11-220ENST00000498532 DUSP18Q8NEJ0 188 aa12.81□□□□□ -0.36
HDAC11-220ENST00000498532 OR52I2Q8NH67 350 aa12.81□□□□□ -0.36
HDAC11-220ENST00000498532 EXTL2Q9UBQ6 330 aa12.81□□□□□ -0.36
HDAC11-220ENST00000498532 A0A0B4J293 547 aa12.8□□□□□ -0.36
HDAC11-220ENST00000498532 MPTX1A8MV57 137 aa12.8□□□□□ -0.36
HDAC11-220ENST00000498532 CORTO00230 105 aa12.8□□□□□ -0.36
HDAC11-220ENST00000498532 ST8SIA3O43173 380 aa12.8□□□□□ -0.36
HDAC11-220ENST00000498532 HOXA1P49639 335 aaPredicted RBP12.8□□□□□ -0.36
HDAC11-220ENST00000498532 FAM90A2PQ658T7 463 aa12.8□□□□□ -0.36
HDAC11-220ENST00000498532 TCF24Q7RTU0 167 aa12.8□□□□□ -0.36
HDAC11-220ENST00000498532 CCDC71LQ8N9Z2 235 aa12.8□□□□□ -0.36
HDAC11-220ENST00000498532 CSTL1Q9H114 145 aa12.8□□□□□ -0.36
HDAC11-220ENST00000498532 COPZ2Q9P299 210 aa12.8□□□□□ -0.36
HDAC11-220ENST00000498532 KLK5Q9Y337 293 aaPredicted RBP12.8□□□□□ -0.36
HDAC11-220ENST00000498532 PUS1Q9Y606 427 aaKnown RBP eCLIP12.8□□□□□ -0.36
HDAC11-220ENST00000498532 INS-IGF2F8WCM5 200 aa12.79□□□□□ -0.36
HDAC11-220ENST00000498532 GABARAPO95166 117 aa12.79□□□□□ -0.36
HDAC11-220ENST00000498532 P0C879 139 aa12.79□□□□□ -0.36
HDAC11-220ENST00000498532 ZNF182P17025 639 aaPredicted RBP12.79□□□□□ -0.36
HDAC11-220ENST00000498532 SUB1P53999 127 aaKnown RBP eCLIP12.79□□□□□ -0.36
HDAC11-220ENST00000498532 SCGB2B2Q4G0G5 96 aa12.79□□□□□ -0.36
HDAC11-220ENST00000498532 ZNF600Q6ZNG1 722 aa12.79□□□□□ -0.36
HDAC11-220ENST00000498532 RNASE11Q8TAA1 199 aaKnown RBP12.79□□□□□ -0.36
HDAC11-220ENST00000498532 C15orf40Q8WUR7 153 aa12.79□□□□□ -0.36
HDAC11-220ENST00000498532 GATAD1Q8WUU5 269 aa12.79□□□□□ -0.36
HDAC11-220ENST00000498532 ST8SIA2Q92186 375 aa12.79□□□□□ -0.36
HDAC11-220ENST00000498532 NAA50Q9GZZ1 169 aaKnown RBP12.79□□□□□ -0.36
HDAC11-220ENST00000498532 ENY2Q9NPA8 101 aa12.79□□□□□ -0.36
HDAC11-220ENST00000498532 MTFP1Q9UDX5 166 aa12.79□□□□□ -0.36
HDAC11-220ENST00000498532 IGHV3-66A0A0C4DH42 116 aa12.78□□□□□ -0.36
HDAC11-220ENST00000498532 RPL11P62913 178 aaKnown RBP12.78□□□□□ -0.36
HDAC11-220ENST00000498532 CTF1Q16619 201 aa12.78□□□□□ -0.36
HDAC11-220ENST00000498532 OR4D10Q8NGI6 311 aa12.78□□□□□ -0.36
HDAC11-220ENST00000498532 OR13C8Q8NGS7 320 aa12.78□□□□□ -0.36
HDAC11-220ENST00000498532 ZFAND1Q8TCF1 268 aa12.78□□□□□ -0.36
HDAC11-220ENST00000498532 RRNAD1Q96FB5 475 aaKnown RBP12.78□□□□□ -0.36
HDAC11-220ENST00000498532 TMEM231Q9H6L2 316 aa12.78□□□□□ -0.36
HDAC11-220ENST00000498532 VSIRQ9H7M9 311 aa12.78□□□□□ -0.36
HDAC11-220ENST00000498532 ZFAND3Q9H8U3 227 aa12.78□□□□□ -0.36
HDAC11-220ENST00000498532 DNASE2O00115 360 aaPredicted RBP12.77□□□□□ -0.37
HDAC11-220ENST00000498532 SCGB2A1O75556 95 aa12.77□□□□□ -0.37
HDAC11-220ENST00000498532 APOHP02749 345 aaPredicted RBP12.77□□□□□ -0.37
HDAC11-220ENST00000498532 RNASE2P10153 161 aaKnown RBP12.77□□□□□ -0.37
HDAC11-220ENST00000498532 OPRK1P41145 380 aa12.77□□□□□ -0.37
HDAC11-220ENST00000498532 ETV6P41212 452 aa12.77□□□□□ -0.37
HDAC11-220ENST00000498532 TAS2R19P59542 299 aa12.77□□□□□ -0.37
HDAC11-220ENST00000498532 SP6Q3SY56 376 aa12.77□□□□□ -0.37
HDAC11-220ENST00000498532 TERB2Q8NHR7 220 aa12.77□□□□□ -0.37
HDAC11-220ENST00000498532 ABHD1Q96SE0 405 aa12.77□□□□□ -0.37
HDAC11-220ENST00000498532 RARRES2Q99969 163 aa12.77□□□□□ -0.37
HDAC11-220ENST00000498532 MS4A6AQ9H2W1 248 aa12.77□□□□□ -0.37
HDAC11-220ENST00000498532 A0A1B0GU03 582 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms