RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 NDUFA4L2Q9NRX3 87 aa8.38□□□□□ -1.07
CDK9-205ENST00000498339 SMIM30A4D0T7 59 aa8.37□□□□□ -1.07
CDK9-205ENST00000498339 CASQ2O14958 399 aaPredicted RBP8.37□□□□□ -1.07
CDK9-205ENST00000498339 CD74P04233 296 aa8.37□□□□□ -1.07
CDK9-205ENST00000498339 HTN3P15516 51 aa8.37□□□□□ -1.07
CDK9-205ENST00000498339 RAB3BP20337 219 aa8.37□□□□□ -1.07
CDK9-205ENST00000498339 MLLT11Q13015 90 aaPredicted RBP8.37□□□□□ -1.07
CDK9-205ENST00000498339 TOMM20LQ6UXN7 152 aa8.37□□□□□ -1.07
CDK9-205ENST00000498339 TPRA1Q86W33 373 aa8.37□□□□□ -1.07
CDK9-205ENST00000498339 OR1P1Q8NH06 330 aa8.37□□□□□ -1.07
CDK9-205ENST00000498339 MOB3AQ96BX8 217 aa8.37□□□□□ -1.07
CDK9-205ENST00000498339 VSIRQ9H7M9 311 aa8.37□□□□□ -1.07
CDK9-205ENST00000498339 SCRT2Q9NQ03 307 aa8.37□□□□□ -1.07
CDK9-205ENST00000498339 APOBP04114 4563 aaKnown RBP8.37□□□□□ -1.07
CDK9-205ENST00000498339 MT-CO2P00403 227 aa8.36□□□□□ -1.07
CDK9-205ENST00000498339 KRASP01116 189 aa8.36□□□□□ -1.07
CDK9-205ENST00000498339 RLN1P04808 185 aa8.36□□□□□ -1.07
CDK9-205ENST00000498339 FCER2P06734 321 aa8.36□□□□□ -1.07
CDK9-205ENST00000498339 G6PCP35575 357 aa8.36□□□□□ -1.07
CDK9-205ENST00000498339 HERV-K104P61576 105 aa8.36□□□□□ -1.07
CDK9-205ENST00000498339 TNP2Q05952 138 aa8.36□□□□□ -1.07
CDK9-205ENST00000498339 ZNF818PQ6ZRF7 136 aa8.36□□□□□ -1.07
CDK9-205ENST00000498339 Q8N1X5 172 aa8.36□□□□□ -1.07
CDK9-205ENST00000498339 LILRB2Q8N423 598 aa8.36□□□□□ -1.07
CDK9-205ENST00000498339 BEST4Q8NFU0 473 aa8.36□□□□□ -1.07
CDK9-205ENST00000498339 TXN2Q99757 166 aa8.36□□□□□ -1.07
CDK9-205ENST00000498339 PRNDQ9UKY0 176 aa8.36□□□□□ -1.07
CDK9-205ENST00000498339 PUS1Q9Y606 427 aaKnown RBP eCLIP8.36□□□□□ -1.07
CDK9-205ENST00000498339 TRAV1-2A0A0B4J238 106 aa8.35□□□□□ -1.07
CDK9-205ENST00000498339 I3L2K1 104 aa8.35□□□□□ -1.07
CDK9-205ENST00000498339 SSX5O60225 188 aa8.35□□□□□ -1.07
CDK9-205ENST00000498339 SCGNO76038 276 aa8.35□□□□□ -1.07
CDK9-205ENST00000498339 SPART-AS1P0CW21 52 aa8.35□□□□□ -1.07
CDK9-205ENST00000498339 NUTF2P61970 127 aaKnown RBP8.35□□□□□ -1.07
CDK9-205ENST00000498339 ZNF600Q6ZNG1 722 aa8.35□□□□□ -1.07
CDK9-205ENST00000498339 GRAMD2BQ96HH9 432 aa8.35□□□□□ -1.07
CDK9-205ENST00000498339 NARS2Q96I59 477 aaKnown RBP8.35□□□□□ -1.07
CDK9-205ENST00000498339 C1QTNF4Q9BXJ3 329 aa8.35□□□□□ -1.07
CDK9-205ENST00000498339 FKBP11Q9NYL4 201 aa8.35□□□□□ -1.07
CDK9-205ENST00000498339 XCL2Q9UBD3 114 aa8.35□□□□□ -1.07
CDK9-205ENST00000498339 TMED3Q9Y3Q3 217 aa8.35□□□□□ -1.07
CDK9-205ENST00000498339 A0A1W2PS18 150 aa8.34□□□□□ -1.07
CDK9-205ENST00000498339 K7EQG2 157 aa8.34□□□□□ -1.07
CDK9-205ENST00000498339 RGS10O43665 173 aa8.34□□□□□ -1.07
CDK9-205ENST00000498339 NPPCP23582 126 aa8.34□□□□□ -1.07
CDK9-205ENST00000498339 NPBWR1P48145 328 aa8.34□□□□□ -1.07
CDK9-205ENST00000498339 PSMG4Q5JS54 123 aa8.34□□□□□ -1.07
CDK9-205ENST00000498339 CSNK1G2-AS1Q8NCQ2 148 aa8.34□□□□□ -1.07
CDK9-205ENST00000498339 BORCS5Q969J3 196 aa8.34□□□□□ -1.07
CDK9-205ENST00000498339 METTL26Q96S19 204 aa8.34□□□□□ -1.07
CDK9-205ENST00000498339 MGLLQ99685 303 aa8.34□□□□□ -1.07
CDK9-205ENST00000498339 RNF167Q9H6Y7 350 aa8.34□□□□□ -1.07
CDK9-205ENST00000498339 ZFAND3Q9H8U3 227 aa8.34□□□□□ -1.07
CDK9-205ENST00000498339 TPRKBQ9Y3C4 175 aa8.34□□□□□ -1.07
CDK9-205ENST00000498339 DNAH5Q8TE73 4624 aa8.33□□□□□ -1.08
CDK9-205ENST00000498339 IGHV3OR16-12A0A075B7B8 117 aa8.33□□□□□ -1.08
CDK9-205ENST00000498339 HELTA6NFD8 242 aa8.33□□□□□ -1.08
CDK9-205ENST00000498339 LPAR6P43657 344 aa8.33□□□□□ -1.08
CDK9-205ENST00000498339 P2RY1P47900 373 aa8.33□□□□□ -1.08
CDK9-205ENST00000498339 EIF2B2P49770 351 aaKnown RBP8.33□□□□□ -1.08
CDK9-205ENST00000498339 DHRS2Q13268 280 aa8.33□□□□□ -1.08
CDK9-205ENST00000498339 RNF212Q495C1 297 aa8.33□□□□□ -1.08
CDK9-205ENST00000498339 FCAMRQ8WWV6 532 aa8.33□□□□□ -1.08
CDK9-205ENST00000498339 FAM210BQ96KR6 192 aa8.33□□□□□ -1.08
CDK9-205ENST00000498339 TSC22D3Q99576 134 aa8.33□□□□□ -1.08
CDK9-205ENST00000498339 ATG101Q9BSB4 218 aa8.33□□□□□ -1.08
CDK9-205ENST00000498339 VCXQ9H320 206 aa8.33□□□□□ -1.08
CDK9-205ENST00000498339 TMEM189A5PLL7 270 aa8.32□□□□□ -1.08
CDK9-205ENST00000498339 DBX1A6NMT0 343 aa8.32□□□□□ -1.08
CDK9-205ENST00000498339 F2RP25116 425 aa8.32□□□□□ -1.08
CDK9-205ENST00000498339 C22orf42Q6IC83 251 aa8.32□□□□□ -1.08
CDK9-205ENST00000498339 ZNF367Q7RTV3 350 aa8.32□□□□□ -1.08
CDK9-205ENST00000498339 OR4A16Q8NH70 328 aa8.32□□□□□ -1.08
CDK9-205ENST00000498339 LGALS14Q8TCE9 139 aa8.32□□□□□ -1.08
CDK9-205ENST00000498339 NIPSNAP3BQ9BS92 247 aa8.32□□□□□ -1.08
CDK9-205ENST00000498339 A0A1B0GU03 582 aa8.31□□□□□ -1.08
CDK9-205ENST00000498339 TEX48A0A1B0GUV7 120 aa8.31□□□□□ -1.08
CDK9-205ENST00000498339 SCGB2A1O75556 95 aa8.31□□□□□ -1.08
CDK9-205ENST00000498339 FGF9P31371 208 aaPredicted RBP8.31□□□□□ -1.08
CDK9-205ENST00000498339 ERHP84090 104 aaKnown RBP8.31□□□□□ -1.08
CDK9-205ENST00000498339 HOGA1Q86XE5 327 aa8.31□□□□□ -1.08
CDK9-205ENST00000498339 C6orf223Q8N319 242 aa8.31□□□□□ -1.08
CDK9-205ENST00000498339 ZNF114Q8NC26 417 aa8.31□□□□□ -1.08
CDK9-205ENST00000498339 DCANP1Q8TF63 244 aa8.31□□□□□ -1.08
CDK9-205ENST00000498339 TMEM230Q96A57 120 aa8.31□□□□□ -1.08
CDK9-205ENST00000498339 RAB40CQ96S21 281 aa8.31□□□□□ -1.08
CDK9-205ENST00000498339 RHBDL2Q9NX52 303 aa8.31□□□□□ -1.08
CDK9-205ENST00000498339 EHFQ9NZC4 300 aa8.31□□□□□ -1.08
CDK9-205ENST00000498339 DAPK2Q9UIK4 370 aa8.31□□□□□ -1.08
CDK9-205ENST00000498339 TRAV18A0A075B6X5 111 aa8.3□□□□□ -1.08
CDK9-205ENST00000498339 NOTOA8MTQ0 251 aa8.3□□□□□ -1.08
CDK9-205ENST00000498339 PGLYRP1O75594 196 aaPredicted RBP8.3□□□□□ -1.08
CDK9-205ENST00000498339 GNRHRP30968 328 aa8.3□□□□□ -1.08
CDK9-205ENST00000498339 PPP5CP53041 499 aa8.3□□□□□ -1.08
CDK9-205ENST00000498339 SNRPD3P62318 126 aaKnown RBP8.3□□□□□ -1.08
CDK9-205ENST00000498339 KCTD21Q4G0X4 260 aa8.3□□□□□ -1.08
CDK9-205ENST00000498339 SPINK9Q5DT21 86 aa8.3□□□□□ -1.08
CDK9-205ENST00000498339 FAM222AQ5U5X8 452 aa8.3□□□□□ -1.08
CDK9-205ENST00000498339 TMEM88Q6PEY1 159 aa8.3□□□□□ -1.08
CDK9-205ENST00000498339 CMTM1Q8IZ96 169 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms