RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 OR10G9Q8NGN4 311 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 OR10G7Q8NGN6 311 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 C17orf50Q8WW18 174 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 MISP3Q96FF7 219 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 CITED4Q96RK1 184 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 PFDN5Q99471 154 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 TMUB1Q9BVT8 246 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 WNT10AQ9GZT5 417 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 SH3BGRL3Q9H299 93 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 HRH4Q9H3N8 390 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 CRYBG3Q68DQ2 2970 aa6.72□□□□□ -1.33
SF3A1-210ENST00000498259 SPG11Q96JI7 2443 aa6.71□□□□□ -1.33
SF3A1-210ENST00000498259 ELOA3CA0A087WX78 387 aaPredicted RBP6.71□□□□□ -1.34
SF3A1-210ENST00000498259 ZFP92A6NM28 416 aa6.71□□□□□ -1.34
SF3A1-210ENST00000498259 KRBOX1C9JBD0 128 aa6.71□□□□□ -1.34
SF3A1-210ENST00000498259 AGPAT2O15120 278 aa6.71□□□□□ -1.34
SF3A1-210ENST00000498259 MYOD1P15172 320 aa6.71□□□□□ -1.34
SF3A1-210ENST00000498259 MDKP21741 143 aaPredicted RBP6.71□□□□□ -1.34
SF3A1-210ENST00000498259 SRP14P37108 136 aaKnown RBP6.71□□□□□ -1.34
SF3A1-210ENST00000498259 TAS2R45P59539 299 aa6.71□□□□□ -1.34
SF3A1-210ENST00000498259 B2MP61769 119 aa6.71□□□□□ -1.34
SF3A1-210ENST00000498259 RHOBP62745 196 aa6.71□□□□□ -1.34
SF3A1-210ENST00000498259 RUNX1Q01196 453 aa6.71□□□□□ -1.34
SF3A1-210ENST00000498259 GAMTQ14353 236 aa6.71□□□□□ -1.34
SF3A1-210ENST00000498259 MRGPRG-AS1Q2M3A8 158 aa6.71□□□□□ -1.34
SF3A1-210ENST00000498259 KLF17Q5JT82 389 aaPredicted RBP6.71□□□□□ -1.34
SF3A1-210ENST00000498259 FAM209BQ5JX69 171 aa6.71□□□□□ -1.34
SF3A1-210ENST00000498259 C10orf55Q5SWW7 151 aa6.71□□□□□ -1.34
SF3A1-210ENST00000498259 FAM120AOSQ5T036 256 aa6.71□□□□□ -1.34
SF3A1-210ENST00000498259 SLC7A5P1Q8MH63 180 aa6.71□□□□□ -1.34
SF3A1-210ENST00000498259 TMEM116Q8NCL8 245 aa6.71□□□□□ -1.34
SF3A1-210ENST00000498259 OR1L4Q8NGR5 311 aa6.71□□□□□ -1.34
SF3A1-210ENST00000498259 LYPD6BQ8NI32 183 aa6.71□□□□□ -1.34
SF3A1-210ENST00000498259 SFT2D1Q8WV19 159 aa6.71□□□□□ -1.34
SF3A1-210ENST00000498259 ACY3Q96HD9 319 aa6.71□□□□□ -1.34
SF3A1-210ENST00000498259 CXorf58Q96LI9 332 aa6.71□□□□□ -1.34
SF3A1-210ENST00000498259 TXN2Q99757 166 aa6.71□□□□□ -1.34
SF3A1-210ENST00000498259 RSG1Q9BU20 258 aa6.71□□□□□ -1.34
SF3A1-210ENST00000498259 LSM4Q9Y4Z0 139 aaKnown RBP6.71□□□□□ -1.34
SF3A1-210ENST00000498259 TACC2O95359 2948 aa6.71□□□□□ -1.34
SF3A1-210ENST00000498259 IGHV7-81A0A0B4J1V7 117 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 CTXND1A0A1B0GTU2 59 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 A6NDX4 124 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 CGB1A6NKQ9 187 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 E7EUB6 86 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 H3BUA1 57 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 AP4M1O00189 453 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 CD5LO43866 347 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 REG1AP05451 166 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 AREGP15514 252 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 IER3P46695 156 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 MFAP4P55083 255 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 ELLP55199 621 aaPredicted RBP6.7□□□□□ -1.34
SF3A1-210ENST00000498259 ARSJQ5FYB0 599 aaPredicted RBP6.7□□□□□ -1.34
SF3A1-210ENST00000498259 ACSM6Q6P461 480 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 UNQ5815/PRO19632Q6UWF5 114 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 SPNS3Q6ZMD2 512 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 SLC35E3Q7Z769 313 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 KRTAP1-3Q8IUG1 177 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 TMEM86BQ8N661 226 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 MAPK1IP1LQ8NDC0 245 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 WFDC11Q8NEX6 87 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 OR4X1Q8NH49 305 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 FAM110DQ8TAY7 271 aaPredicted RBP6.7□□□□□ -1.34
SF3A1-210ENST00000498259 SUN5Q8TC36 379 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 GATAD1Q8WUU5 269 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 TMEM170AQ8WVE7 144 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 MBD3L1Q8WWY6 194 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 ZNF48Q96MX3 618 aaPredicted RBP6.7□□□□□ -1.34
SF3A1-210ENST00000498259 ATP6V0BQ99437 205 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 TRGV9Q99603 122 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 GGTLC1Q9BX51 225 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 RPRMQ9NS64 109 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 ZNF580Q9UK33 172 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 PXMP4Q9Y6I8 212 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 ANKRD17O75179 2603 aaKnown RBP6.7□□□□□ -1.34
SF3A1-210ENST00000498259 NAV2Q8IVL1 2488 aa6.7□□□□□ -1.34
SF3A1-210ENST00000498259 CELSR2Q9HCU4 2923 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 A0A1B0GW64 132 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 TCRBV4S1A1TA0A5B7 111 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 MFSD2BA6NFX1 497 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 SMAD7O15105 426 aaKnown RBP6.69□□□□□ -1.34
SF3A1-210ENST00000498259 BRI3O95415 125 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 AVPP01185 164 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 FSHBP01225 129 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 IGF1P05019 195 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 CDC34P49427 236 aaPredicted RBP6.69□□□□□ -1.34
SF3A1-210ENST00000498259 PSMB3P49720 205 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 PMS2P11Q13670 270 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 DEFB112Q30KQ8 113 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 HIST2H2BCQ6DN03 193 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 Q6YL49 198 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 CYP2G1PQ6ZSU1 146 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 THAP8Q8NA92 274 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 NECAP1Q8NC96 275 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 BPIFCQ8NFQ6 507 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 STXBP6Q8NFX7 210 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 PIFOQ8TCI5 191 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 VN1R17PQ8TDU5 208 aa6.69□□□□□ -1.34
SF3A1-210ENST00000498259 NPIPB3Q92617 1050 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms