RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 SSBP2P81877 361 aaPredicted RBP6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 RAB31Q13636 194 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 ZNF726P1Q15940 193 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 DEFB113Q30KQ7 82 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 MIC13Q5XKP0 118 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 SPSB3Q6PJ21 355 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 LCN15Q6UWW0 184 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 LRRC75A-AS1Q8N1F1 130 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 Q8N6K4 173 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 OR10G4Q8NGN3 311 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 OR10G9Q8NGN4 311 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 OR10G7Q8NGN6 311 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 SFT2D1Q8WV19 159 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 SSMEM1Q8WWF3 244 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 ARPC1AQ92747 370 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 MISP3Q96FF7 219 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 ACY3Q96HD9 319 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 SRSF8Q9BRL6 282 aaKnown RBP6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 ACTR3CQ9C0K3 210 aaPredicted RBP6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 EIF5A2Q9GZV4 153 aaKnown RBP6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 NPVFQ9HCQ7 196 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 LSM4Q9Y4Z0 139 aaKnown RBP6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 ABCA1O95477 2261 aa6.44□□□□□ -1.38
PDZRN3-212ENST00000498048 TACC2O95359 2948 aa6.43□□□□□ -1.38
PDZRN3-212ENST00000498048 A0A096LNT2 108 aa6.43□□□□□ -1.38
PDZRN3-212ENST00000498048 TMEM218A2RU14 115 aa6.43□□□□□ -1.38
PDZRN3-212ENST00000498048 NCBP2LA6PVI3 153 aaKnown RBP6.43□□□□□ -1.38
PDZRN3-212ENST00000498048 F8W036 122 aa6.43□□□□□ -1.38
PDZRN3-212ENST00000498048 APOC3P02656 99 aa6.43□□□□□ -1.38
PDZRN3-212ENST00000498048 SFTA3P0C7M3 94 aa6.43□□□□□ -1.38
PDZRN3-212ENST00000498048 FAM106CPP0CH98 169 aa6.43□□□□□ -1.38
PDZRN3-212ENST00000498048 DEFA4P12838 97 aa6.43□□□□□ -1.38
PDZRN3-212ENST00000498048 ADCYAP1P18509 176 aa6.43□□□□□ -1.38
PDZRN3-212ENST00000498048 GATA3P23771 443 aa6.43□□□□□ -1.38
PDZRN3-212ENST00000498048 FGF8P55075 233 aaPredicted RBP6.43□□□□□ -1.38
PDZRN3-212ENST00000498048 SRSF3P84103 164 aaKnown RBP6.43□□□□□ -1.38
PDZRN3-212ENST00000498048 NDPQ00604 133 aa6.43□□□□□ -1.38
PDZRN3-212ENST00000498048 EBI3Q14213 229 aa6.43□□□□□ -1.38
PDZRN3-212ENST00000498048 PEA15Q15121 130 aa6.43□□□□□ -1.38
PDZRN3-212ENST00000498048 ETFRF1Q6IPR1 90 aa6.43□□□□□ -1.38
PDZRN3-212ENST00000498048 BRD3OSQ6XYD6 125 aa6.43□□□□□ -1.38
PDZRN3-212ENST00000498048 C19orf35Q6ZS72 473 aa6.43□□□□□ -1.38
PDZRN3-212ENST00000498048 TMEM144Q7Z5S9 345 aa6.43□□□□□ -1.38
PDZRN3-212ENST00000498048 IQCF2Q8IXL9 164 aa6.43□□□□□ -1.38
PDZRN3-212ENST00000498048 STPG3Q8N7X2 389 aa6.43□□□□□ -1.38
PDZRN3-212ENST00000498048 LINC01356Q8N9X3 169 aa6.43□□□□□ -1.38
PDZRN3-212ENST00000498048 HIF1ANQ9NWT6 349 aa6.43□□□□□ -1.38
PDZRN3-212ENST00000498048 C1RLQ9NZP8 487 aa6.43□□□□□ -1.38
PDZRN3-212ENST00000498048 F11RQ9Y624 299 aaKnown RBP6.43□□□□□ -1.38
PDZRN3-212ENST00000498048 PTPN13Q12923 2485 aa6.43□□□□□ -1.38
PDZRN3-212ENST00000498048 TENM4Q6N022 2769 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 TRAV1-1A0A0B4J248 108 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 LOC102723971A0A1B0GUV8 181 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 ZFP92A6NM28 416 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 SEC14L6B5MCN3 397 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 FCN1O00602 326 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 HMGB3O15347 200 aaKnown RBP6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 TSPAN9O75954 239 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 CD5P06127 495 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 IGHV4-38-2P0DP08 117 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 BCL2P10415 239 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 OR10J1P30954 320 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 GPX4P36969 197 aaPredicted RBP6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 RND2P52198 227 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 GAMTQ14353 236 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 FXYD3Q14802 87 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 HAGHQ16775 308 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 ZNF506Q5JVG8 444 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 FAM120AOSQ5T036 256 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 RPP25LQ8N5L8 163 aaKnown RBP6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 OR1P1Q8NH06 330 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 MBD3L1Q8WWY6 194 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 CACNG8Q8WXS5 425 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 C1orf159Q96HA4 380 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 AJUBAQ96IF1 538 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 FAM103A1Q9BTL3 118 aaKnown RBP6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 FNDC4Q9H6D8 234 aaPredicted RBP6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 C7orf69Q9H7B7 122 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 SLC39A9Q9NUM3 307 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 GNG13Q9P2W3 67 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 MOB4Q9Y3A3 225 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 ABCA12Q86UK0 2595 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 FBN2P35556 2912 aa6.42□□□□□ -1.38
PDZRN3-212ENST00000498048 POLQO75417 2590 aa6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 A0A0U1RQK1 487 aa6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 A0A1W2PPV4 95 aa6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 RBFOX3A6NFN3 312 aa6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 CYB5BO43169 146 aa6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 EIF3GO75821 320 aaKnown RBP eCLIP6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 YIF1AO95070 293 aa6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 HLA-DRB1P01911 266 aa6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 FBP1P09467 338 aa6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 RPL29P47914 159 aaKnown RBP6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 MFAP2P55001 183 aa6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 BPIFB3P59826 476 aa6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 RHOBP62745 196 aa6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 CCL20P78556 96 aa6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 DEFA5Q01523 94 aa6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 LOXL1Q08397 574 aaPredicted RBP6.41□□□□□ -1.38
PDZRN3-212ENST00000498048 ICAM4Q14773 271 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms