RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 SF3B5Q9BWJ5 86 aaKnown RBP10.78□□□□□ -0.68
GAPVD1-220ENST00000497580 COMMD5Q9GZQ3 224 aa10.78□□□□□ -0.68
GAPVD1-220ENST00000497580 BOD1L1Q8NFC6 3051 aa10.78□□□□□ -0.68
GAPVD1-220ENST00000497580 KMT2EQ8IZD2 1858 aa10.78□□□□□ -0.68
GAPVD1-220ENST00000497580 SMIM27A0A1W2PRY6 76 aa10.78□□□□□ -0.68
GAPVD1-220ENST00000497580 SSR4P51571 173 aa10.78□□□□□ -0.68
GAPVD1-220ENST00000497580 SNRNP40Q96DI7 357 aaKnown RBP10.78□□□□□ -0.68
GAPVD1-220ENST00000497580 NABP2Q9BQ15 211 aa10.78□□□□□ -0.68
GAPVD1-220ENST00000497580 GNG12Q9UBI6 72 aa10.78□□□□□ -0.68
GAPVD1-220ENST00000497580 IGHV1-24A0A0C4DH33 117 aa10.78□□□□□ -0.68
GAPVD1-220ENST00000497580 A0A1W2PR77 199 aa10.78□□□□□ -0.68
GAPVD1-220ENST00000497580 J3QT63 122 aa10.78□□□□□ -0.68
GAPVD1-220ENST00000497580 P0C879 139 aa10.78□□□□□ -0.68
GAPVD1-220ENST00000497580 RPS20P60866 119 aaKnown RBP10.78□□□□□ -0.68
GAPVD1-220ENST00000497580 HIST1H1AQ02539 215 aaPredicted RBP10.78□□□□□ -0.68
GAPVD1-220ENST00000497580 LINC00696Q6ZRV3 163 aa10.78□□□□□ -0.68
GAPVD1-220ENST00000497580 MAP1LC3CQ9BXW4 147 aa10.78□□□□□ -0.68
GAPVD1-220ENST00000497580 LOC102723996A0A087X1L8 192 aa10.77□□□□□ -0.69
GAPVD1-220ENST00000497580 A0A1W2PRE2 83 aa10.77□□□□□ -0.69
GAPVD1-220ENST00000497580 NPIPB11E5RHQ5 1161 aa10.77□□□□□ -0.69
GAPVD1-220ENST00000497580 CCL4P13236 92 aa10.77□□□□□ -0.69
GAPVD1-220ENST00000497580 GPR12P47775 334 aa10.77□□□□□ -0.69
GAPVD1-220ENST00000497580 LINC00596Q86U02 117 aa10.77□□□□□ -0.69
GAPVD1-220ENST00000497580 TEX45Q8NA69 505 aa10.77□□□□□ -0.69
GAPVD1-220ENST00000497580 OR4A5Q8NH83 315 aa10.77□□□□□ -0.69
GAPVD1-220ENST00000497580 SLC25A40Q8TBP6 338 aa10.77□□□□□ -0.69
GAPVD1-220ENST00000497580 PERPQ96FX8 193 aa10.77□□□□□ -0.69
GAPVD1-220ENST00000497580 JMJD8Q96S16 334 aa10.77□□□□□ -0.69
GAPVD1-220ENST00000497580 NBASA2RRP1 2371 aa10.77□□□□□ -0.69
GAPVD1-220ENST00000497580 TRAV5A0A0B4J249 113 aa10.77□□□□□ -0.69
GAPVD1-220ENST00000497580 TMEM30CPA0ZSE6 113 aa10.77□□□□□ -0.69
GAPVD1-220ENST00000497580 SMPD2O60906 423 aa10.77□□□□□ -0.69
GAPVD1-220ENST00000497580 UBE2L3P68036 154 aaKnown RBP10.77□□□□□ -0.69
GAPVD1-220ENST00000497580 TMEM249Q2WGJ8 235 aa10.77□□□□□ -0.69
GAPVD1-220ENST00000497580 OR2V2Q96R30 315 aa10.77□□□□□ -0.69
GAPVD1-220ENST00000497580 CHRNA10Q9GZZ6 450 aa10.77□□□□□ -0.69
GAPVD1-220ENST00000497580 TMEM167BQ9NRX6 74 aa10.77□□□□□ -0.69
GAPVD1-220ENST00000497580 LY96Q9Y6Y9 160 aa10.77□□□□□ -0.69
GAPVD1-220ENST00000497580 G3V4G9 280 aa10.76□□□□□ -0.69
GAPVD1-220ENST00000497580 AREGP15514 252 aa10.76□□□□□ -0.69
GAPVD1-220ENST00000497580 GDF1P27539 372 aa10.76□□□□□ -0.69
GAPVD1-220ENST00000497580 LYSMD4Q5XG99 296 aa10.76□□□□□ -0.69
GAPVD1-220ENST00000497580 VWA1Q6PCB0 445 aa10.76□□□□□ -0.69
GAPVD1-220ENST00000497580 GFRA3O60609 400 aa10.76□□□□□ -0.69
GAPVD1-220ENST00000497580 MEF2CQ06413 473 aaPredicted RBP10.76□□□□□ -0.69
GAPVD1-220ENST00000497580 KRTAP27-1Q3LI81 207 aa10.76□□□□□ -0.69
GAPVD1-220ENST00000497580 TCF19Q9Y242 345 aa10.76□□□□□ -0.69
GAPVD1-220ENST00000497580 PLAUP00749 431 aa10.76□□□□□ -0.69
GAPVD1-220ENST00000497580 PRB4P10163 310 aaPredicted RBP10.76□□□□□ -0.69
GAPVD1-220ENST00000497580 RAB30Q15771 203 aa10.76□□□□□ -0.69
GAPVD1-220ENST00000497580 C3AR1Q16581 482 aa10.76□□□□□ -0.69
GAPVD1-220ENST00000497580 TMEM97Q5BJF2 176 aa10.76□□□□□ -0.69
GAPVD1-220ENST00000497580 RPS19BP1Q86WX3 136 aaKnown RBP10.76□□□□□ -0.69
GAPVD1-220ENST00000497580 OR2K2Q8NGT1 345 aa10.76□□□□□ -0.69
GAPVD1-220ENST00000497580 OR10AG1Q8NH19 301 aa10.76□□□□□ -0.69
GAPVD1-220ENST00000497580 POM121L2Q96KW2 1035 aa10.76□□□□□ -0.69
GAPVD1-220ENST00000497580 PGLYRP4Q96LB8 373 aa10.76□□□□□ -0.69
GAPVD1-220ENST00000497580 A0A1W2PQM1 296 aa10.75□□□□□ -0.69
GAPVD1-220ENST00000497580 MT-CO3P00414 261 aa10.75□□□□□ -0.69
GAPVD1-220ENST00000497580 RBPJQ06330 500 aa10.75□□□□□ -0.69
GAPVD1-220ENST00000497580 RPL39P5Q59GN2 51 aa10.75□□□□□ -0.69
GAPVD1-220ENST00000497580 COLCA1Q6ZS62 124 aa10.75□□□□□ -0.69
GAPVD1-220ENST00000497580 CDX2Q99626 313 aaPredicted RBP10.75□□□□□ -0.69
GAPVD1-220ENST00000497580 PROK2Q9HC23 129 aa10.75□□□□□ -0.69
GAPVD1-220ENST00000497580 HCFC1P51610 2035 aa10.75□□□□□ -0.69
GAPVD1-220ENST00000497580 ARFGEF3Q5TH69 2177 aa10.75□□□□□ -0.69
GAPVD1-220ENST00000497580 M0R296 226 aa10.75□□□□□ -0.69
GAPVD1-220ENST00000497580 IGLV2-8P01709 118 aa10.75□□□□□ -0.69
GAPVD1-220ENST00000497580 BMI1P35226 326 aa10.75□□□□□ -0.69
GAPVD1-220ENST00000497580 FAM214BQ7L5A3 538 aa10.75□□□□□ -0.69
GAPVD1-220ENST00000497580 TUSC5Q8IXB3 177 aa10.75□□□□□ -0.69
GAPVD1-220ENST00000497580 WFDC12Q8WWY7 111 aa10.75□□□□□ -0.69
GAPVD1-220ENST00000497580 C12orf49Q9H741 205 aa10.75□□□□□ -0.69
GAPVD1-220ENST00000497580 SCRT2Q9NQ03 307 aa10.75□□□□□ -0.69
GAPVD1-220ENST00000497580 SPCS1Q9Y6A9 102 aa10.75□□□□□ -0.69
GAPVD1-220ENST00000497580 GNG5P63218 68 aa10.75□□□□□ -0.69
GAPVD1-220ENST00000497580 FOXF2Q12947 444 aa10.75□□□□□ -0.69
GAPVD1-220ENST00000497580 MLANAQ16655 118 aa10.75□□□□□ -0.69
GAPVD1-220ENST00000497580 Q6ZR03 302 aa10.75□□□□□ -0.69
GAPVD1-220ENST00000497580 SPEM1Q8N4L4 309 aa10.75□□□□□ -0.69
GAPVD1-220ENST00000497580 ZBTB34Q8NCN2 500 aa10.75□□□□□ -0.69
GAPVD1-220ENST00000497580 URB1-AS1Q96HZ7 61 aa10.75□□□□□ -0.69
GAPVD1-220ENST00000497580 RTL8AQ9BWD3 113 aa10.75□□□□□ -0.69
GAPVD1-220ENST00000497580 PILRBQ9UKJ0 227 aa10.75□□□□□ -0.69
GAPVD1-220ENST00000497580 HLA-DRB1P01911 266 aa10.74□□□□□ -0.69
GAPVD1-220ENST00000497580 AZU1P20160 251 aa10.74□□□□□ -0.69
GAPVD1-220ENST00000497580 LGALS7P47929 136 aa10.74□□□□□ -0.69
GAPVD1-220ENST00000497580 ALKBH6Q3KRA9 238 aa10.74□□□□□ -0.69
GAPVD1-220ENST00000497580 F11RQ9Y624 299 aaKnown RBP10.74□□□□□ -0.69
GAPVD1-220ENST00000497580 IGHV3-48P01763 117 aa10.74□□□□□ -0.69
GAPVD1-220ENST00000497580 PYYP10082 97 aa10.74□□□□□ -0.69
GAPVD1-220ENST00000497580 WDR86Q86TI4 376 aa10.74□□□□□ -0.69
GAPVD1-220ENST00000497580 TMEM140Q9NV12 185 aa10.74□□□□□ -0.69
GAPVD1-220ENST00000497580 SH3BGRL2Q9UJC5 107 aa10.74□□□□□ -0.69
GAPVD1-220ENST00000497580 MPC1Q9Y5U8 109 aa10.74□□□□□ -0.69
GAPVD1-220ENST00000497580 PKDREJQ9NTG1 2253 aa10.74□□□□□ -0.69
GAPVD1-220ENST00000497580 PCNX1Q96RV3 2341 aa10.74□□□□□ -0.69
GAPVD1-220ENST00000497580 A0A0G2JLM5 398 aa10.74□□□□□ -0.69
GAPVD1-220ENST00000497580 GGNQ86UU5 652 aa10.74□□□□□ -0.69
GAPVD1-220ENST00000497580 SMRP1Q8NCR6 262 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms