RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	FCGR2B	P31994	310 aa	Predicted RBP	4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	G6PC	P35575	357 aa		4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	RFX2	P48378	723 aa		4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	ARPC4	P59998	168 aa		4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	LSM3	P62310	102 aa	Known RBP	4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	GUCA2B	Q16661	112 aa		4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	UBE2NL	Q5JXB2	153 aa		4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	FAM90A2P	Q658T7	463 aa		4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	ZNF57	Q68EA5	555 aa	Predicted RBP	4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	PVRIG	Q6DKI7	326 aa		4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	SUMO4	Q6EEV6	95 aa		4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	DHRS11	Q6UWP2	260 aa		4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	SLC25A42	Q86VD7	318 aa		4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	LHFPL1	Q86WI0	220 aa		4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	VSTM2A	Q8TAG5	236 aa		4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	DYNLRB2	Q8TF09	96 aa		4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	SCARB1	Q8WTV0	552 aa		4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	EEF1AKMT3	Q96AZ1	226 aa		4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	SEC22A	Q96IW7	307 aa		4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	ZNF2	Q9BSG1	426 aa	Predicted RBP	4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	DCUN1D5	Q9BTE7	237 aa		4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	GGTLC1	Q9BX51	225 aa		4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	QTRT1	Q9BXR0	403 aa	Known RBP	4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	YTHDF1	Q9BYJ9	559 aa	Known RBP	4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	VCX3B	Q9H321	246 aa		4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	PLEKHA2	Q9HB19	425 aa		4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	TMEM14B	Q9NUH8	114 aa		4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	TECR	Q9NZ01	308 aa	Known RBP	4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	EHF	Q9NZC4	300 aa		4.04	□□□□□ -1.76
UBE3C-208	ENST00000497368	TRBV7-1	A0A0A6YYK4	115 aa		4.03	□□□□□ -1.76
UBE3C-208	ENST00000497368		A0A0J9YWU9	116 aa		4.03	□□□□□ -1.76
UBE3C-208	ENST00000497368	OR2T8	A6NH00	312 aa		4.03	□□□□□ -1.76
UBE3C-208	ENST00000497368	TSPAN4	O14817	238 aa		4.03	□□□□□ -1.76
UBE3C-208	ENST00000497368	HRAS	P01112	189 aa		4.03	□□□□□ -1.76
UBE3C-208	ENST00000497368	IGHV3-48	P01763	117 aa		4.03	□□□□□ -1.76
UBE3C-208	ENST00000497368	APOH	P02749	345 aa	Predicted RBP	4.03	□□□□□ -1.76
UBE3C-208	ENST00000497368	CTSG	P08311	255 aa		4.03	□□□□□ -1.76
UBE3C-208	ENST00000497368	GIG44	P09565	113 aa	Predicted RBP	4.03	□□□□□ -1.76
UBE3C-208	ENST00000497368	OR13C7	P0DN81	318 aa		4.03	□□□□□ -1.76
UBE3C-208	ENST00000497368	HIST1H1B	P16401	226 aa	Known RBP	4.03	□□□□□ -1.76
UBE3C-208	ENST00000497368	F2R	P25116	425 aa		4.03	□□□□□ -1.76
UBE3C-208	ENST00000497368	HRH1	P35367	487 aa		4.03	□□□□□ -1.76
UBE3C-208	ENST00000497368	TNFRSF9	Q07011	255 aa		4.03	□□□□□ -1.76
UBE3C-208	ENST00000497368	DEFB135	Q30KP9	77 aa		4.03	□□□□□ -1.76
UBE3C-208	ENST00000497368	CADM3	Q8N126	398 aa		4.03	□□□□□ -1.76
UBE3C-208	ENST00000497368	SAMD12	Q8N8I0	201 aa		4.03	□□□□□ -1.76
UBE3C-208	ENST00000497368	ZNF114	Q8NC26	417 aa		4.03	□□□□□ -1.76
UBE3C-208	ENST00000497368	VN1R17P	Q8TDU5	208 aa		4.03	□□□□□ -1.76
UBE3C-208	ENST00000497368	TMEM170A	Q8WVE7	144 aa		4.03	□□□□□ -1.76
UBE3C-208	ENST00000497368	RNF2	Q99496	336 aa		4.03	□□□□□ -1.76
UBE3C-208	ENST00000497368	SRSF8	Q9BRL6	282 aa	Known RBP	4.03	□□□□□ -1.76
UBE3C-208	ENST00000497368	MIXL1	Q9H2W2	232 aa		4.03	□□□□□ -1.76
UBE3C-208	ENST00000497368	TUBA4B	Q9H853	241 aa		4.03	□□□□□ -1.76
UBE3C-208	ENST00000497368	HRASLS	Q9HDD0	168 aa		4.03	□□□□□ -1.76
UBE3C-208	ENST00000497368	PALMD	Q9NP74	551 aa		4.03	□□□□□ -1.76
UBE3C-208	ENST00000497368	SLC2A8	Q9NY64	477 aa		4.03	□□□□□ -1.76
UBE3C-208	ENST00000497368		A0A087WWL8	130 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	IGHV3-49	A0A0A0MS15	119 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	TRAV25	A0A0B4J276	109 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	CHEK1	O14757	476 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	JTB	O76095	146 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	ACTL6B	O94805	426 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	SCGB1D2	O95969	90 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	CTSD	P07339	412 aa	Predicted RBP	4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	TRAPPC2	P0DI81	140 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	TRAPPC2B	P0DI82	140 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	ELK1	P19419	428 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	HLA-DMA	P28067	261 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	LPAR6	P43657	344 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	CATR1	Q13166	79 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	CTF1	Q16619	201 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	PHLDA2	Q53GA4	152 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	SPINK9	Q5DT21	86 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	LYG2	Q86SG7	212 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	TBC1D26	Q86UD7	250 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	APRG1	Q8IVJ8	170 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	RPP25L	Q8N5L8	163 aa	Known RBP	4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	OR2C3	Q8N628	320 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	OR4D10	Q8NGI6	311 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	OR52B4	Q8NGK2	314 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	LHFPL5	Q8TAF8	219 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	LSM10	Q969L4	123 aa	Known RBP	4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	SLC25A46	Q96AG3	418 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	DGCR14	Q96DF8	476 aa	Known RBP	4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	OR10C1	Q96KK4	312 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	CXorf58	Q96LI9	332 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	TP53RK	Q96S44	253 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	SPAG8	Q99932	426 aa	Predicted RBP	4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	C5orf66	Q9H5L9	145 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	FNDC4	Q9H6D8	234 aa	Predicted RBP	4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	MAP6D1	Q9H9H5	199 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	MRPL27	Q9P0M9	148 aa	Known RBP	4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	OR51B2	Q9Y5P1	312 aa		4.02	□□□□□ -1.77
UBE3C-208	ENST00000497368	IGHV3OR16-13	A0A075B7E8	117 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	IGHV3-74	A0A0B4J1X5	117 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368		A0A0B4J293	547 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	IGHV7-4-1	A0A0J9YVY3	117 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368		A0A1B0GU03	582 aa		4.01	□□□□□ -1.77
UBE3C-208	ENST00000497368	ZNF320	A2RRD8	509 aa		4.01	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms