RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 SPCS1Q9Y6A9 102 aa10.66□□□□□ -0.7
VEGFA-215ENST00000497139 CEP192Q8TEP8 1941 aa10.66□□□□□ -0.7
VEGFA-215ENST00000497139 ZNF407Q9C0G0 2248 aa10.66□□□□□ -0.7
VEGFA-215ENST00000497139 J3QR89 54 aa10.65□□□□□ -0.7
VEGFA-215ENST00000497139 KIR2DS2P43631 304 aa10.65□□□□□ -0.7
VEGFA-215ENST00000497139 TCTEX1D4Q5JR98 221 aa10.65□□□□□ -0.7
VEGFA-215ENST00000497139 ABHD12Q8N2K0 398 aa10.65□□□□□ -0.7
VEGFA-215ENST00000497139 TNRC18O15417 2968 aaPredicted RBP10.65□□□□□ -0.7
VEGFA-215ENST00000497139 A0A1W2PR77 199 aa10.65□□□□□ -0.7
VEGFA-215ENST00000497139 SH2D7A6NKC9 451 aaPredicted RBP10.65□□□□□ -0.7
VEGFA-215ENST00000497139 C8orf88P0DMB2 117 aa10.65□□□□□ -0.7
VEGFA-215ENST00000497139 FGF6P10767 208 aa10.65□□□□□ -0.7
VEGFA-215ENST00000497139 IGFBP2P18065 325 aa10.65□□□□□ -0.7
VEGFA-215ENST00000497139 CAMPP49913 170 aa10.65□□□□□ -0.7
VEGFA-215ENST00000497139 KIR3DS1Q14943 382 aa10.65□□□□□ -0.7
VEGFA-215ENST00000497139 CD300EQ496F6 205 aaPredicted RBP10.65□□□□□ -0.7
VEGFA-215ENST00000497139 TPRX1Q8N7U7 411 aa10.65□□□□□ -0.7
VEGFA-215ENST00000497139 ZNF257Q9Y2Q1 563 aa10.65□□□□□ -0.7
VEGFA-215ENST00000497139 PRUNE2Q8WUY3 3088 aa10.65□□□□□ -0.71
VEGFA-215ENST00000497139 MED12Q93074 2177 aa10.64□□□□□ -0.71
VEGFA-215ENST00000497139 CXCL13O43927 109 aa10.64□□□□□ -0.71
VEGFA-215ENST00000497139 ACTL6BO94805 426 aa10.64□□□□□ -0.71
VEGFA-215ENST00000497139 FAM87AP0C7U9 286 aa10.64□□□□□ -0.71
VEGFA-215ENST00000497139 FABP2P12104 132 aa10.64□□□□□ -0.71
VEGFA-215ENST00000497139 ATP5IP56385 69 aaPredicted RBP10.64□□□□□ -0.71
VEGFA-215ENST00000497139 ZXDAP98168 799 aa10.64□□□□□ -0.71
VEGFA-215ENST00000497139 TRAT1Q6PIZ9 186 aa10.64□□□□□ -0.71
VEGFA-215ENST00000497139 COL25A1Q9BXS0 654 aaPredicted RBP10.64□□□□□ -0.71
VEGFA-215ENST00000497139 EML6Q6ZMW3 1958 aa10.64□□□□□ -0.71
VEGFA-215ENST00000497139 C2CD4DB7Z1M9 353 aa10.64□□□□□ -0.71
VEGFA-215ENST00000497139 ADH4P08319 380 aa10.64□□□□□ -0.71
VEGFA-215ENST00000497139 GPR12P47775 334 aa10.64□□□□□ -0.71
VEGFA-215ENST00000497139 SSR4P51571 173 aa10.64□□□□□ -0.71
VEGFA-215ENST00000497139 MTURNQ8N3F0 131 aa10.64□□□□□ -0.71
VEGFA-215ENST00000497139 TEX45Q8NA69 505 aa10.64□□□□□ -0.71
VEGFA-215ENST00000497139 OR10W1Q8NGF6 305 aa10.64□□□□□ -0.71
VEGFA-215ENST00000497139 GFRA4Q9GZZ7 299 aa10.64□□□□□ -0.71
VEGFA-215ENST00000497139 PLP2Q04941 152 aa10.64□□□□□ -0.71
VEGFA-215ENST00000497139 OR10D3Q8NH80 312 aa10.64□□□□□ -0.71
VEGFA-215ENST00000497139 ADTRPQ96IZ2 230 aa10.64□□□□□ -0.71
VEGFA-215ENST00000497139 C7orf69Q9H7B7 122 aa10.64□□□□□ -0.71
VEGFA-215ENST00000497139 AMMECR1Q9Y4X0 333 aaPredicted RBP10.64□□□□□ -0.71
VEGFA-215ENST00000497139 IGKV3D-15A0A087WSY6 115 aa10.63□□□□□ -0.71
VEGFA-215ENST00000497139 LOC102723996A0A087X1L8 192 aa10.63□□□□□ -0.71
VEGFA-215ENST00000497139 LTBRP36941 435 aa10.63□□□□□ -0.71
VEGFA-215ENST00000497139 FOXF2Q12947 444 aa10.63□□□□□ -0.71
VEGFA-215ENST00000497139 FOXI2Q6ZQN5 318 aa10.63□□□□□ -0.71
VEGFA-215ENST00000497139 BOD1L2Q8IYS8 172 aa10.63□□□□□ -0.71
VEGFA-215ENST00000497139 OR4A5Q8NH83 315 aa10.63□□□□□ -0.71
VEGFA-215ENST00000497139 SLC25A33Q9BSK2 321 aa10.63□□□□□ -0.71
VEGFA-215ENST00000497139 PRRG4Q9BZD6 226 aa10.63□□□□□ -0.71
VEGFA-215ENST00000497139 ENY2Q9NPA8 101 aa10.63□□□□□ -0.71
VEGFA-215ENST00000497139 PILRBQ9UKJ0 227 aa10.63□□□□□ -0.71
VEGFA-215ENST00000497139 NCKAP5O14513 1909 aa10.63□□□□□ -0.71
VEGFA-215ENST00000497139 C15orf61A6NNL5 157 aa10.63□□□□□ -0.71
VEGFA-215ENST00000497139 A8MWL6 223 aa10.63□□□□□ -0.71
VEGFA-215ENST00000497139 M0R296 226 aa10.63□□□□□ -0.71
VEGFA-215ENST00000497139 FCGR3BO75015 233 aa10.63□□□□□ -0.71
VEGFA-215ENST00000497139 CD27P26842 260 aa10.63□□□□□ -0.71
VEGFA-215ENST00000497139 PCOLCEQ15113 449 aa10.63□□□□□ -0.71
VEGFA-215ENST00000497139 SPATA25Q9BR10 227 aa10.63□□□□□ -0.71
VEGFA-215ENST00000497139 RABAC1Q9UI14 185 aa10.63□□□□□ -0.71
VEGFA-215ENST00000497139 FOXA2Q9Y261 457 aaPredicted RBP10.63□□□□□ -0.71
VEGFA-215ENST00000497139 J3QW42 95 aa10.62□□□□□ -0.71
VEGFA-215ENST00000497139 PEX7O00628 323 aa10.62□□□□□ -0.71
VEGFA-215ENST00000497139 MRPL33O75394 65 aaKnown RBP10.62□□□□□ -0.71
VEGFA-215ENST00000497139 SCRG1O75711 98 aa10.62□□□□□ -0.71
VEGFA-215ENST00000497139 CCL2P13500 99 aa10.62□□□□□ -0.71
VEGFA-215ENST00000497139 SMRP1Q8NCR6 262 aa10.62□□□□□ -0.71
VEGFA-215ENST00000497139 ABCA7Q8IZY2 2146 aa10.62□□□□□ -0.71
VEGFA-215ENST00000497139 SPTBN5Q9NRC6 3674 aaKnown RBP10.62□□□□□ -0.71
VEGFA-215ENST00000497139 UQCRFS1P47985 274 aa10.62□□□□□ -0.71
VEGFA-215ENST00000497139 TIMM23BQ5SRD1 257 aa10.62□□□□□ -0.71
VEGFA-215ENST00000497139 SPEM1Q8N4L4 309 aa10.62□□□□□ -0.71
VEGFA-215ENST00000497139 ZNF48Q96MX3 618 aaPredicted RBP10.62□□□□□ -0.71
VEGFA-215ENST00000497139 RPP21Q9H633 154 aaKnown RBP10.62□□□□□ -0.71
VEGFA-215ENST00000497139 USF3Q68DE3 2245 aa10.61□□□□□ -0.71
VEGFA-215ENST00000497139 A1L4Q6 167 aa10.61□□□□□ -0.71
VEGFA-215ENST00000497139 GAGE12HA6NDE8 117 aa10.61□□□□□ -0.71
VEGFA-215ENST00000497139 HSPE1P61604 102 aaKnown RBP10.61□□□□□ -0.71
VEGFA-215ENST00000497139 OR2Z1Q8NG97 314 aa10.61□□□□□ -0.71
VEGFA-215ENST00000497139 PRR7Q8TB68 274 aa10.61□□□□□ -0.71
VEGFA-215ENST00000497139 GTSF1LQ9H1H1 148 aa10.61□□□□□ -0.71
VEGFA-215ENST00000497139 TMEM140Q9NV12 185 aa10.61□□□□□ -0.71
VEGFA-215ENST00000497139 ZNF492Q9P255 531 aa10.61□□□□□ -0.71
VEGFA-215ENST00000497139 PTPRBP23467 1997 aa10.61□□□□□ -0.71
VEGFA-215ENST00000497139 VWC2LB2RUY7 222 aa10.61□□□□□ -0.71
VEGFA-215ENST00000497139 SMAD7O15105 426 aaKnown RBP10.61□□□□□ -0.71
VEGFA-215ENST00000497139 CSN1S1P47710 185 aa10.61□□□□□ -0.71
VEGFA-215ENST00000497139 UBE2L3P68036 154 aaKnown RBP10.61□□□□□ -0.71
VEGFA-215ENST00000497139 SMAGPQ0VAQ4 97 aa10.61□□□□□ -0.71
VEGFA-215ENST00000497139 PSMG4Q5JS54 123 aa10.61□□□□□ -0.71
VEGFA-215ENST00000497139 ZC2HC1AQ96GY0 325 aa10.61□□□□□ -0.71
VEGFA-215ENST00000497139 SIGLEC8Q9NYZ4 499 aa10.61□□□□□ -0.71
VEGFA-215ENST00000497139 TEX48A0A1B0GUV7 120 aa10.6□□□□□ -0.71
VEGFA-215ENST00000497139 PSPNO60542 156 aa10.6□□□□□ -0.71
VEGFA-215ENST00000497139 FOXA3P55318 350 aaPredicted RBP10.6□□□□□ -0.71
VEGFA-215ENST00000497139 WDR86Q86TI4 376 aa10.6□□□□□ -0.71
VEGFA-215ENST00000497139 Q8TCH9 128 aa10.6□□□□□ -0.71
VEGFA-215ENST00000497139 ZNF747Q9BV97 191 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms