RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 OR8S1Q8NH09 359 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 OR1L1Q8NH94 360 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 FAM57AQ8TBR7 257 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 ITLN2Q8WWU7 325 aaPredicted RBP2.55□□□□□ -2
EXOSC3-208ENST00000496910 ELSPBP1Q96BH3 223 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 C12orf43Q96C57 262 aaKnown RBP2.55□□□□□ -2
EXOSC3-208ENST00000496910 TMEM101Q96IK0 257 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 DNAJC30Q96LL9 226 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 YPEL4Q96NS1 127 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 VGLL1Q99990 258 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 C1orf50Q9BV19 199 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 MAP1LC3BQ9GZQ8 125 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 FGF23Q9GZV9 251 aaPredicted RBP2.55□□□□□ -2
EXOSC3-208ENST00000496910 TMEM222Q9H0R3 208 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 PRSS21Q9Y6M0 314 aa2.55□□□□□ -2
EXOSC3-208ENST00000496910 DOCK10Q96BY6 2186 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 NUMA1Q14980 2115 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 TDRD6O60522 2096 aaKnown RBP2.54□□□□□ -2
EXOSC3-208ENST00000496910 MDC1Q14676 2089 aaKnown RBP2.54□□□□□ -2
EXOSC3-208ENST00000496910 DOCK5Q9H7D0 1870 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 FOCADQ5VW36 1801 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 A0A0J9YWU9 116 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 F5H5P2 479 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 HMGB3O15347 200 aaKnown RBP2.54□□□□□ -2
EXOSC3-208ENST00000496910 TRAF3IP2O43734 574 aaPredicted RBP2.54□□□□□ -2
EXOSC3-208ENST00000496910 SLC37A4O43826 429 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 IGKV1-39P01597 117 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 IGKV1D-39P04432 117 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 SERPINE1P05121 402 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 OR56A5P0C7T3 313 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 ORM2P19652 201 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 CXCL5P42830 114 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 SRP9P49458 86 aaKnown RBP2.54□□□□□ -2
EXOSC3-208ENST00000496910 MEOX2P50222 304 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 ZNF136P52737 540 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 LINC00313P59037 77 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 ESRRGP62508 458 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 RAP1AP62834 184 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 ELOCQ15369 112 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 MPV17L2Q567V2 206 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 MRPL2Q5T653 305 aaKnown RBP2.54□□□□□ -2
EXOSC3-208ENST00000496910 C9orf64Q5T6V5 341 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 LCE1EQ5T753 118 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 TCF23Q7RTU1 214 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 UMODL1-AS1Q8N2C9 162 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 DCAF4L2Q8NA75 395 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 TSTD1Q8NFU3 115 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 OR8J3Q8NGG0 315 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 OR2T27Q8NH04 317 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 OR5J2Q8NH18 312 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 OR51H1Q8NH63 302 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 CD200R1Q8TD46 325 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 PYURFQ96I23 114 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 OR2M2Q96R28 347 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 TSC22D3Q99576 134 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 SEC22CQ9BRL7 303 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 RSPO3Q9BXY4 272 aaPredicted RBP2.54□□□□□ -2
EXOSC3-208ENST00000496910 DEFB126Q9BYW3 111 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 GTSF1LQ9H1H1 148 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 CDC42EP4Q9H3Q1 356 aaKnown RBP2.54□□□□□ -2
EXOSC3-208ENST00000496910 PARVBQ9HBI1 364 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 PLSCR3Q9NRY6 295 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 JPT1Q9UK76 154 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 PAIP2BQ9ULR5 123 aaKnown RBP2.54□□□□□ -2
EXOSC3-208ENST00000496910 ANAPC10Q9UM13 185 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 NEU3Q9UQ49 428 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 COQ4Q9Y3A0 265 aa2.54□□□□□ -2
EXOSC3-208ENST00000496910 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 ARID1AO14497 2285 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 TRAV8-1A0A0A6YYK1 113 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 IGHV3-72A0A0B4J1Y9 119 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 IGKV1-6A0A0C4DH72 117 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 A0A1B0GV50 99 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 C5orf63A6NC05 138 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 KNCNA6PVL3 124 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 LINC00587B1AMM8 73 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 INS-IGF2F8WCM5 200 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 TMX2-CTNND1H3BSU7 103 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 M0R381 172 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 FSTL3O95633 263 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 CCNE2O96020 404 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 SEC11BP0C7V7 166 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 P0C879 139 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 SCGB1C2P0DMR2 95 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 PSG2P11465 335 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 CPMP14384 443 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 ERP29P30040 261 aaKnown RBP2.53□□□□□ -2
EXOSC3-208ENST00000496910 PHBP35232 272 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 NMUP48645 174 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 INPP1P49441 399 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 CCR6P51684 374 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 DEFA3P59666 94 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 CDC42P60953 191 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 Q1RN00 199 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 AKR1C8PQ5T2L2 129 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 ATAD3CQ5T2N8 411 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 SAMD13Q5VXD3 122 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 KRTAP5-11Q6L8G4 156 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 EBLN2Q6P2I7 272 aa2.53□□□□□ -2
EXOSC3-208ENST00000496910 FA2HQ7L5A8 372 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms