RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 OR5G3P0C626 314 aa10.52□□□□□ -0.73
GARNL3-220ENST00000496711 CD99P14209 185 aa10.52□□□□□ -0.73
GARNL3-220ENST00000496711 MLANAQ16655 118 aa10.52□□□□□ -0.73
GARNL3-220ENST00000496711 ACY3Q96HD9 319 aa10.52□□□□□ -0.73
GARNL3-220ENST00000496711 TMEM167BQ9NRX6 74 aa10.52□□□□□ -0.73
GARNL3-220ENST00000496711 TECRQ9NZ01 308 aaKnown RBP10.52□□□□□ -0.73
GARNL3-220ENST00000496711 MIOXQ9UGB7 285 aa10.52□□□□□ -0.73
GARNL3-220ENST00000496711 AMMECR1Q9Y4X0 333 aaPredicted RBP10.52□□□□□ -0.73
GARNL3-220ENST00000496711 SMG1Q96Q15 3661 aaKnown RBP10.52□□□□□ -0.73
GARNL3-220ENST00000496711 KALRNO60229 2985 aa10.51□□□□□ -0.73
GARNL3-220ENST00000496711 A0A1W2PPI3 338 aa10.51□□□□□ -0.73
GARNL3-220ENST00000496711 BUB1B-PAK6H3BSN5 160 aa10.51□□□□□ -0.73
GARNL3-220ENST00000496711 S100A9P06702 114 aaKnown RBP10.51□□□□□ -0.73
GARNL3-220ENST00000496711 GATA2P23769 480 aaPredicted RBP10.51□□□□□ -0.73
GARNL3-220ENST00000496711 DLX1P56177 255 aa10.51□□□□□ -0.73
GARNL3-220ENST00000496711 NDUFA6P56556 154 aa10.51□□□□□ -0.73
GARNL3-220ENST00000496711 MRGPRG-AS1Q2M3A8 158 aa10.51□□□□□ -0.73
GARNL3-220ENST00000496711 MRPL41Q8IXM3 137 aaKnown RBP10.51□□□□□ -0.73
GARNL3-220ENST00000496711 MMD2Q8IY49 270 aa10.51□□□□□ -0.73
GARNL3-220ENST00000496711 TEX45Q8NA69 505 aa10.51□□□□□ -0.73
GARNL3-220ENST00000496711 OR5T1Q8NG75 326 aa10.51□□□□□ -0.73
GARNL3-220ENST00000496711 C11orf52Q96A22 123 aa10.51□□□□□ -0.73
GARNL3-220ENST00000496711 RITA1Q96K30 269 aa10.51□□□□□ -0.73
GARNL3-220ENST00000496711 UHRF2Q96PU4 802 aa10.51□□□□□ -0.73
GARNL3-220ENST00000496711 ELOVL1Q9BW60 279 aa10.51□□□□□ -0.73
GARNL3-220ENST00000496711 SRD5A3Q9H8P0 318 aa10.51□□□□□ -0.73
GARNL3-220ENST00000496711 CBLN4Q9NTU7 201 aa10.51□□□□□ -0.73
GARNL3-220ENST00000496711 IGHV1-3A0A0C4DH29 117 aa10.51□□□□□ -0.73
GARNL3-220ENST00000496711 HOXA5P20719 270 aa10.51□□□□□ -0.73
GARNL3-220ENST00000496711 COX7A1P24310 79 aa10.51□□□□□ -0.73
GARNL3-220ENST00000496711 SRP14P37108 136 aaKnown RBP10.51□□□□□ -0.73
GARNL3-220ENST00000496711 TAS2R45P59539 299 aa10.51□□□□□ -0.73
GARNL3-220ENST00000496711 PSG5Q15238 335 aa10.51□□□□□ -0.73
GARNL3-220ENST00000496711 PQLC2Q6ZP29 291 aa10.51□□□□□ -0.73
GARNL3-220ENST00000496711 OR2T6Q8NHC8 308 aa10.51□□□□□ -0.73
GARNL3-220ENST00000496711 MRPL32Q9BYC8 188 aaKnown RBP10.51□□□□□ -0.73
GARNL3-220ENST00000496711 TRBV20OR9-2A0A075B6H5 130 aa10.5□□□□□ -0.73
GARNL3-220ENST00000496711 PCP4L1A6NKN8 68 aa10.5□□□□□ -0.73
GARNL3-220ENST00000496711 PPP1R2P9O14990 202 aa10.5□□□□□ -0.73
GARNL3-220ENST00000496711 TRGC1P0CF51 173 aa10.5□□□□□ -0.73
GARNL3-220ENST00000496711 AREGP15514 252 aa10.5□□□□□ -0.73
GARNL3-220ENST00000496711 C11orf71Q6IPW1 123 aa10.5□□□□□ -0.73
GARNL3-220ENST00000496711 KCNIP4Q6PIL6 250 aa10.5□□□□□ -0.73
GARNL3-220ENST00000496711 FRZBQ92765 325 aa10.5□□□□□ -0.73
GARNL3-220ENST00000496711 TIMD4Q96H15 378 aa10.5□□□□□ -0.73
GARNL3-220ENST00000496711 RNF2Q99496 336 aa10.5□□□□□ -0.73
GARNL3-220ENST00000496711 FNDC4Q9H6D8 234 aaPredicted RBP10.5□□□□□ -0.73
GARNL3-220ENST00000496711 INSIG2Q9Y5U4 225 aa10.5□□□□□ -0.73
GARNL3-220ENST00000496711 MDFIC2A0A1B0GVS7 189 aa10.49□□□□□ -0.73
GARNL3-220ENST00000496711 A0A1W2PPQ1 181 aa10.49□□□□□ -0.73
GARNL3-220ENST00000496711 IGLC7A0M8Q6 106 aa10.49□□□□□ -0.73
GARNL3-220ENST00000496711 PGPEP1LA6NFU8 196 aa10.49□□□□□ -0.73
GARNL3-220ENST00000496711 PPP5D1E7EU14 171 aa10.49□□□□□ -0.73
GARNL3-220ENST00000496711 PHOX2AO14813 284 aa10.49□□□□□ -0.73
GARNL3-220ENST00000496711 OR7C2O60412 319 aa10.49□□□□□ -0.73
GARNL3-220ENST00000496711 LIPFP07098 398 aa10.49□□□□□ -0.73
GARNL3-220ENST00000496711 CRYGBP07316 175 aa10.49□□□□□ -0.73
GARNL3-220ENST00000496711 RPL27AP46776 148 aaKnown RBP10.49□□□□□ -0.73
GARNL3-220ENST00000496711 CDX1P47902 265 aaPredicted RBP10.49□□□□□ -0.73
GARNL3-220ENST00000496711 PRB3Q04118 309 aaPredicted RBP10.49□□□□□ -0.73
GARNL3-220ENST00000496711 PRSS8Q16651 343 aa10.49□□□□□ -0.73
GARNL3-220ENST00000496711 ZNF114Q8NC26 417 aa10.49□□□□□ -0.73
GARNL3-220ENST00000496711 RPEQ96AT9 228 aa10.49□□□□□ -0.73
GARNL3-220ENST00000496711 CHODLQ9H9P2 273 aa10.49□□□□□ -0.73
GARNL3-220ENST00000496711 ONECUT1Q9UBC0 465 aa10.49□□□□□ -0.73
GARNL3-220ENST00000496711 PSMB11A5LHX3 300 aa10.49□□□□□ -0.73
GARNL3-220ENST00000496711 PLXNB1O43157 2135 aa10.49□□□□□ -0.73
GARNL3-220ENST00000496711 GGCTO75223 188 aaKnown RBP10.49□□□□□ -0.73
GARNL3-220ENST00000496711 LY6HO94772 140 aa10.49□□□□□ -0.73
GARNL3-220ENST00000496711 C1QTNF9P0C862 333 aa10.49□□□□□ -0.73
GARNL3-220ENST00000496711 CNTFRP26992 372 aa10.49□□□□□ -0.73
GARNL3-220ENST00000496711 TNXAQ16473 311 aa10.49□□□□□ -0.73
GARNL3-220ENST00000496711 THAP8Q8NA92 274 aa10.49□□□□□ -0.73
GARNL3-220ENST00000496711 LY6G5BQ8NDX9 201 aa10.49□□□□□ -0.73
GARNL3-220ENST00000496711 NEU4Q8WWR8 484 aaPredicted RBP10.49□□□□□ -0.73
GARNL3-220ENST00000496711 ZNF503Q96F45 646 aa10.49□□□□□ -0.73
GARNL3-220ENST00000496711 AURKAIP1Q9NWT8 199 aaPredicted RBP10.49□□□□□ -0.73
GARNL3-220ENST00000496711 ATRXP46100 2492 aa10.48□□□□□ -0.73
GARNL3-220ENST00000496711 SPTBN4Q9H254 2564 aa10.48□□□□□ -0.73
GARNL3-220ENST00000496711 TPRP12270 2363 aaKnown RBP10.48□□□□□ -0.73
GARNL3-220ENST00000496711 ABCA4P78363 2273 aa10.48□□□□□ -0.73
GARNL3-220ENST00000496711 ELOA3CA0A087WX78 387 aaPredicted RBP10.48□□□□□ -0.73
GARNL3-220ENST00000496711 TCRBV4S1A1TA0A5B7 111 aa10.48□□□□□ -0.73
GARNL3-220ENST00000496711 C22orf46C9J442 243 aa10.48□□□□□ -0.73
GARNL3-220ENST00000496711 C9JCJ5 164 aa10.48□□□□□ -0.73
GARNL3-220ENST00000496711 REG1AP05451 166 aa10.48□□□□□ -0.73
GARNL3-220ENST00000496711 C8orf88P0DMB2 117 aa10.48□□□□□ -0.73
GARNL3-220ENST00000496711 FAM3BP58499 235 aaPredicted RBP10.48□□□□□ -0.73
GARNL3-220ENST00000496711 SSBP2P81877 361 aaPredicted RBP10.48□□□□□ -0.73
GARNL3-220ENST00000496711 ETFRF1Q6IPR1 90 aa10.48□□□□□ -0.73
GARNL3-220ENST00000496711 OR2T10Q8NGZ9 312 aa10.48□□□□□ -0.73
GARNL3-220ENST00000496711 TMEM37Q8WXS4 190 aa10.48□□□□□ -0.73
GARNL3-220ENST00000496711 SFRP2Q96HF1 295 aa10.48□□□□□ -0.73
GARNL3-220ENST00000496711 PFDN5Q99471 154 aa10.48□□□□□ -0.73
GARNL3-220ENST00000496711 SIGLEC9Q9Y336 463 aa10.48□□□□□ -0.73
GARNL3-220ENST00000496711 TYMSP04818 313 aa10.47□□□□□ -0.73
GARNL3-220ENST00000496711 SOD3P08294 240 aa10.47□□□□□ -0.73
GARNL3-220ENST00000496711 COMPP49747 757 aaPredicted RBP10.47□□□□□ -0.73
GARNL3-220ENST00000496711 BPIFB3P59826 476 aa10.47□□□□□ -0.73
GARNL3-220ENST00000496711 PVRIGQ6DKI7 326 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms