RNA–Protein interactions for RNA: ENST00000495350.5

CBX1-205, Transcript of chromobox 1, humanhuman

TSL 2 BASIC

Gene CBX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-205ENST00000495350 CTXN2P0C2S0 81 aa4.4□□□□□ -1.71
CBX1-205ENST00000495350 TRAPPC2P0DI81 140 aa4.4□□□□□ -1.71
CBX1-205ENST00000495350 TRAPPC2BP0DI82 140 aa4.4□□□□□ -1.71
CBX1-205ENST00000495350 RAB6AP20340 208 aa4.4□□□□□ -1.71
CBX1-205ENST00000495350 NFYAP23511 347 aaPredicted RBP4.4□□□□□ -1.71
CBX1-205ENST00000495350 SCAND1P57086 179 aa4.4□□□□□ -1.71
CBX1-205ENST00000495350 ERVK-16P61578 105 aa4.4□□□□□ -1.71
CBX1-205ENST00000495350 RPL30P62888 115 aaKnown RBP4.4□□□□□ -1.71
CBX1-205ENST00000495350 PLAC9Q5JTB6 97 aa4.4□□□□□ -1.71
CBX1-205ENST00000495350 ACTL10Q5JWF8 245 aa4.4□□□□□ -1.71
CBX1-205ENST00000495350 FAM90A2PQ658T7 463 aa4.4□□□□□ -1.71
CBX1-205ENST00000495350 MFSD4AQ8N468 514 aa4.4□□□□□ -1.71
CBX1-205ENST00000495350 C15orf53Q8NAA6 179 aa4.4□□□□□ -1.71
CBX1-205ENST00000495350 DMBX1Q8NFW5 382 aa4.4□□□□□ -1.71
CBX1-205ENST00000495350 STXBP6Q8NFX7 210 aa4.4□□□□□ -1.71
CBX1-205ENST00000495350 SCARB1Q8WTV0 552 aa4.4□□□□□ -1.71
CBX1-205ENST00000495350 RAB2BQ8WUD1 216 aa4.4□□□□□ -1.71
CBX1-205ENST00000495350 ST8SIA2Q92186 375 aa4.4□□□□□ -1.71
CBX1-205ENST00000495350 FRZBQ92765 325 aa4.4□□□□□ -1.71
CBX1-205ENST00000495350 SLC25A46Q96AG3 418 aa4.4□□□□□ -1.71
CBX1-205ENST00000495350 NARS2Q96I59 477 aaKnown RBP4.4□□□□□ -1.71
CBX1-205ENST00000495350 ZNF414Q96IQ9 312 aa4.4□□□□□ -1.71
CBX1-205ENST00000495350 OR10C1Q96KK4 312 aa4.4□□□□□ -1.71
CBX1-205ENST00000495350 C18orf15Q96N68 181 aa4.4□□□□□ -1.71
CBX1-205ENST00000495350 BCL7BQ9BQE9 202 aa4.4□□□□□ -1.71
CBX1-205ENST00000495350 HINT2Q9BX68 163 aa4.4□□□□□ -1.71
CBX1-205ENST00000495350 DCSTAMPQ9H295 470 aa4.4□□□□□ -1.71
CBX1-205ENST00000495350 RAB22AQ9UL26 194 aa4.4□□□□□ -1.71
CBX1-205ENST00000495350 OR2W1Q9Y3N9 320 aa4.4□□□□□ -1.71
CBX1-205ENST00000495350 F11RQ9Y624 299 aaKnown RBP4.4□□□□□ -1.71
CBX1-205ENST00000495350 AGRNO00468 2067 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 FLG2Q5D862 2391 aaPredicted RBP4.39□□□□□ -1.71
CBX1-205ENST00000495350 IGHV3-66A0A0C4DH42 116 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 A0A1W2PS18 150 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 METTL21EPA6NDL7 271 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 CCDC160A6NGH7 325 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 CGB1A6NKQ9 187 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 H3BMQ9 156 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 J3QL48 77 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 GNG7O60262 68 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 HLA-DQB1P01920 261 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 CTSGP08311 255 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 GIG44P09565 113 aaPredicted RBP4.39□□□□□ -1.71
CBX1-205ENST00000495350 ZNF688P0C7X2 276 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 NQO2P16083 231 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 EIF2B2P49770 351 aaKnown RBP4.39□□□□□ -1.71
CBX1-205ENST00000495350 RORCP51449 518 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 MFAP4P55083 255 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 TAS2R31P59538 309 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 CATR1Q13166 79 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 SPCS2Q15005 226 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 SPAG16Q8N0X2 631 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 FAM24BQ8N5W8 94 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 OR10W1Q8NGF6 305 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 OR1L8Q8NGR8 309 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 OR5H6Q8NGV6 325 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 OR10R2Q8NGX6 335 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 LGALS14Q8TCE9 139 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 LSM10Q969L4 123 aaKnown RBP4.39□□□□□ -1.71
CBX1-205ENST00000495350 GRAMD2BQ96HH9 432 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 NIPSNAP3BQ9BS92 247 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 ATG5Q9H1Y0 275 aa4.39□□□□□ -1.71
CBX1-205ENST00000495350 NACAE9PAV3 2078 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 IGHV3OR16-12A0A075B7B8 117 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 K7EIM0 57 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 UPK2O00526 184 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 RBFOX2O43251 390 aaKnown RBP eCLIP4.38□□□□□ -1.71
CBX1-205ENST00000495350 TNFSF12O43508 249 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 SCGNO76038 276 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 HPRT1P00492 218 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 FGF2P09038 288 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 HIST1H1DP16402 221 aaKnown RBP4.38□□□□□ -1.71
CBX1-205ENST00000495350 ZNF182P17025 639 aaPredicted RBP4.38□□□□□ -1.71
CBX1-205ENST00000495350 DTYMKP23919 212 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 ARPC4P59998 168 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 WT1-ASQ06250 92 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 ARL6IP1Q15041 203 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 Q5VSD8 79 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 TMEM88Q6PEY1 159 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 GSG1LQ6UXU4 331 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 Q6ZS49 121 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 DYNC2LI1Q8TCX1 351 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 AP3S1Q92572 193 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 MOB3AQ96BX8 217 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 SLC25A38Q96DW6 304 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 MISP3Q96FF7 219 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 TMEM56Q96MV1 263 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 TXN2Q99757 166 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 NXF2Q9GZY0 626 aaKnown RBP4.38□□□□□ -1.71
CBX1-205ENST00000495350 VSIRQ9H7M9 311 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 TMEM140Q9NV12 185 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 RHBDL2Q9NX52 303 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 XCL2Q9UBD3 114 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 COMMD3Q9UBI1 195 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 RSL24D1Q9UHA3 163 aaKnown RBP4.38□□□□□ -1.71
CBX1-205ENST00000495350 KCNK7Q9Y2U2 307 aa4.38□□□□□ -1.71
CBX1-205ENST00000495350 A0A0A6YYH2 397 aa4.37□□□□□ -1.71
CBX1-205ENST00000495350 TRAV3A0A0B4J244 114 aa4.37□□□□□ -1.71
CBX1-205ENST00000495350 IGKV1D-13A0A0B4J2D9 117 aa4.37□□□□□ -1.71
CBX1-205ENST00000495350 HELTA6NFD8 242 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms