RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, human

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-208	ENST00000495327	ZNF57	Q68EA5	555 aa	Predicted RBP	10.04	□□□□□ -0.8
RBM28-208	ENST00000495327	TMEM61	Q8N0U2	210 aa		10.04	□□□□□ -0.8
RBM28-208	ENST00000495327	UXS1	Q8NBZ7	420 aa		10.04	□□□□□ -0.8
RBM28-208	ENST00000495327	RNASE11	Q8TAA1	199 aa	Known RBP	10.04	□□□□□ -0.8
RBM28-208	ENST00000495327	LHFPL5	Q8TAF8	219 aa		10.04	□□□□□ -0.8
RBM28-208	ENST00000495327	RBPMS	Q93062	196 aa	Known RBP	10.04	□□□□□ -0.8
RBM28-208	ENST00000495327	TRIM63	Q969Q1	353 aa		10.04	□□□□□ -0.8
RBM28-208	ENST00000495327	TXN2	Q99757	166 aa		10.04	□□□□□ -0.8
RBM28-208	ENST00000495327	NEURL2	Q9BR09	285 aa		10.04	□□□□□ -0.8
RBM28-208	ENST00000495327	CHRDL1	Q9BU40	450 aa		10.04	□□□□□ -0.8
RBM28-208	ENST00000495327	PDCD10	Q9BUL8	212 aa		10.04	□□□□□ -0.8
RBM28-208	ENST00000495327	DAZ1	Q9NQZ3	744 aa	Known RBP	10.04	□□□□□ -0.8
RBM28-208	ENST00000495327	TRAV25	A0A0B4J276	109 aa		10.03	□□□□□ -0.8
RBM28-208	ENST00000495327	IGHV3-35	A0A0C4DH35	117 aa		10.03	□□□□□ -0.8
RBM28-208	ENST00000495327	MT-CO2	P00403	227 aa		10.03	□□□□□ -0.8
RBM28-208	ENST00000495327	IFNA17	P01571	189 aa		10.03	□□□□□ -0.8
RBM28-208	ENST00000495327		Q56UQ5	140 aa		10.03	□□□□□ -0.8
RBM28-208	ENST00000495327	PVRIG	Q6DKI7	326 aa		10.03	□□□□□ -0.8
RBM28-208	ENST00000495327	BTNL8	Q6UX41	500 aa		10.03	□□□□□ -0.8
RBM28-208	ENST00000495327	UBAC2	Q8NBM4	344 aa		10.03	□□□□□ -0.8
RBM28-208	ENST00000495327	DEDD2	Q8WXF8	326 aa		10.03	□□□□□ -0.8
RBM28-208	ENST00000495327	MISP3	Q96FF7	219 aa		10.03	□□□□□ -0.8
RBM28-208	ENST00000495327	WDR89	Q96FK6	387 aa	Predicted RBP	10.03	□□□□□ -0.8
RBM28-208	ENST00000495327	GALNT14	Q96FL9	552 aa		10.03	□□□□□ -0.8
RBM28-208	ENST00000495327	SCGB3A2	Q96PL1	93 aa		10.03	□□□□□ -0.8
RBM28-208	ENST00000495327	TMEM56-RWDD3	S4R434	201 aa		10.03	□□□□□ -0.8
RBM28-208	ENST00000495327	CSMD3	Q7Z407	3707 aa		10.02	□□□□□ -0.81
RBM28-208	ENST00000495327	CORT	O00230	105 aa		10.02	□□□□□ -0.81
RBM28-208	ENST00000495327	CTSG	P08311	255 aa		10.02	□□□□□ -0.81
RBM28-208	ENST00000495327	CD7	P09564	240 aa		10.02	□□□□□ -0.81
RBM28-208	ENST00000495327	S100A5	P33763	92 aa		10.02	□□□□□ -0.81
RBM28-208	ENST00000495327	FAU	P35544	74 aa	Known RBP	10.02	□□□□□ -0.81
RBM28-208	ENST00000495327	SNCA	P37840	140 aa		10.02	□□□□□ -0.81
RBM28-208	ENST00000495327	HOXA1	P49639	335 aa	Predicted RBP	10.02	□□□□□ -0.81
RBM28-208	ENST00000495327	MFAP4	P55083	255 aa		10.02	□□□□□ -0.81
RBM28-208	ENST00000495327	AP3S2	P59780	193 aa		10.02	□□□□□ -0.81
RBM28-208	ENST00000495327	REL	Q04864	619 aa	Predicted RBP	10.02	□□□□□ -0.81
RBM28-208	ENST00000495327	KLF9	Q13886	244 aa	Predicted RBP	10.02	□□□□□ -0.81
RBM28-208	ENST00000495327	ZNF79	Q15937	498 aa		10.02	□□□□□ -0.81
RBM28-208	ENST00000495327	GUCA2B	Q16661	112 aa		10.02	□□□□□ -0.81
RBM28-208	ENST00000495327	SPINK9	Q5DT21	86 aa		10.02	□□□□□ -0.81
RBM28-208	ENST00000495327	CCDC190	Q86UF4	302 aa		10.02	□□□□□ -0.81
RBM28-208	ENST00000495327	SELENOH	Q8IZQ5	122 aa	Known RBP	10.02	□□□□□ -0.81
RBM28-208	ENST00000495327	OR52E5	Q8NH55	327 aa		10.02	□□□□□ -0.81
RBM28-208	ENST00000495327	IL22RA2	Q969J5	263 aa		10.02	□□□□□ -0.81
RBM28-208	ENST00000495327	TMEM230	Q96A57	120 aa		10.02	□□□□□ -0.81
RBM28-208	ENST00000495327	ZNF414	Q96IQ9	312 aa		10.02	□□□□□ -0.81
RBM28-208	ENST00000495327	TUBA4B	Q9H853	241 aa		10.02	□□□□□ -0.81
RBM28-208	ENST00000495327	MCUB	Q9NWR8	336 aa		10.02	□□□□□ -0.81
RBM28-208	ENST00000495327	NBEAL2	Q6ZNJ1	2754 aa		10.02	□□□□□ -0.81
RBM28-208	ENST00000495327	C15orf62	A8K5M9	175 aa		10.01	□□□□□ -0.81
RBM28-208	ENST00000495327		K7EMT4	169 aa		10.01	□□□□□ -0.81
RBM28-208	ENST00000495327	NUPL2	O15504	423 aa	Known RBP	10.01	□□□□□ -0.81
RBM28-208	ENST00000495327	RNASE2	P10153	161 aa	Known RBP	10.01	□□□□□ -0.81
RBM28-208	ENST00000495327	SPCS3	P61009	180 aa		10.01	□□□□□ -0.81
RBM28-208	ENST00000495327	BSX	Q3C1V8	233 aa		10.01	□□□□□ -0.81
RBM28-208	ENST00000495327	TMEM268	Q5VZI3	342 aa		10.01	□□□□□ -0.81
RBM28-208	ENST00000495327	LINC00322	Q6ZN03	302 aa	Predicted RBP	10.01	□□□□□ -0.81
RBM28-208	ENST00000495327		Q6ZRM9	215 aa		10.01	□□□□□ -0.81
RBM28-208	ENST00000495327	SLC16A13	Q7RTY0	426 aa		10.01	□□□□□ -0.81
RBM28-208	ENST00000495327	ETV6	P41212	452 aa		10	□□□□□ -0.81
RBM28-208	ENST00000495327	SUB1	P53999	127 aa	Known RBP eCLIP	10	□□□□□ -0.81
RBM28-208	ENST00000495327	TMEM187	Q14656	261 aa		10	□□□□□ -0.81
RBM28-208	ENST00000495327	HAGH	Q16775	308 aa		10	□□□□□ -0.81
RBM28-208	ENST00000495327	ANKRD55	Q3KP44	614 aa		10	□□□□□ -0.81
RBM28-208	ENST00000495327	PYDC2	Q56P42	97 aa		10	□□□□□ -0.81
RBM28-208	ENST00000495327	TOMM5	Q8N4H5	51 aa		10	□□□□□ -0.81
RBM28-208	ENST00000495327	PINX1	Q96BK5	328 aa	Known RBP	10	□□□□□ -0.81
RBM28-208	ENST00000495327	OR10C1	Q96KK4	312 aa		10	□□□□□ -0.81
RBM28-208	ENST00000495327	SPATA25	Q9BR10	227 aa		10	□□□□□ -0.81
RBM28-208	ENST00000495327	WFDC10A	Q9H1F0	79 aa		10	□□□□□ -0.81
RBM28-208	ENST00000495327	ENY2	Q9NPA8	101 aa		10	□□□□□ -0.81
RBM28-208	ENST00000495327	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	10	□□□□□ -0.81
RBM28-208	ENST00000495327	CACNG5	Q9UF02	275 aa		10	□□□□□ -0.81
RBM28-208	ENST00000495327	CACFD1	Q9UGQ2	172 aa		10	□□□□□ -0.81
RBM28-208	ENST00000495327	KCNIP3	Q9Y2W7	256 aa		10	□□□□□ -0.81
RBM28-208	ENST00000495327	STARD9	Q9P2P6	4700 aa		9.99	□□□□□ -0.81
RBM28-208	ENST00000495327	LYST	Q99698	3801 aa		9.99	□□□□□ -0.81
RBM28-208	ENST00000495327	OR11H12	B2RN74	326 aa		9.99	□□□□□ -0.81
RBM28-208	ENST00000495327	TSPAN4	O14817	238 aa		9.99	□□□□□ -0.81
RBM28-208	ENST00000495327	GNG7	O60262	68 aa		9.99	□□□□□ -0.81
RBM28-208	ENST00000495327	SCAF4	O95104	1147 aa	Known RBP	9.99	□□□□□ -0.81
RBM28-208	ENST00000495327	NPBWR1	P48145	328 aa		9.99	□□□□□ -0.81
RBM28-208	ENST00000495327	SUPT4H1	P63272	117 aa	Known RBP	9.99	□□□□□ -0.81
RBM28-208	ENST00000495327	RBPMS2	Q6ZRY4	209 aa	Known RBP	9.99	□□□□□ -0.81
RBM28-208	ENST00000495327	DEFB125	Q8N687	156 aa		9.99	□□□□□ -0.81
RBM28-208	ENST00000495327	DUSP18	Q8NEJ0	188 aa		9.99	□□□□□ -0.81
RBM28-208	ENST00000495327	OR52B4	Q8NGK2	314 aa		9.99	□□□□□ -0.81
RBM28-208	ENST00000495327	GPR146	Q96CH1	333 aa		9.99	□□□□□ -0.81
RBM28-208	ENST00000495327	SPAG8	Q99932	426 aa	Predicted RBP	9.99	□□□□□ -0.81
RBM28-208	ENST00000495327	C20orf24	Q9BUV8	137 aa		9.99	□□□□□ -0.81
RBM28-208	ENST00000495327	SRD5A3	Q9H8P0	318 aa		9.99	□□□□□ -0.81
RBM28-208	ENST00000495327	SELENOK	Q9Y6D0	94 aa		9.99	□□□□□ -0.81
RBM28-208	ENST00000495327	DYNC2H1	Q8NCM8	4307 aa	Known RBP	9.98	□□□□□ -0.81
RBM28-208	ENST00000495327		A0A0B4J2A0	478 aa		9.98	□□□□□ -0.81
RBM28-208	ENST00000495327	PIGBOS1	A0A0B4J2F0	54 aa		9.98	□□□□□ -0.81
RBM28-208	ENST00000495327	IGHV3-48	P01763	117 aa		9.98	□□□□□ -0.81
RBM28-208	ENST00000495327	ANXA3	P12429	323 aa		9.98	□□□□□ -0.81
RBM28-208	ENST00000495327	HTR2B	P41595	481 aa		9.98	□□□□□ -0.81
RBM28-208	ENST00000495327	SRPX	P78539	464 aa		9.98	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms