RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 CHRDL1Q9BU40 450 aa10.88□□□□□ -0.67
SCAP-213ENST00000494938 CACNG5Q9UF02 275 aa10.88□□□□□ -0.67
SCAP-213ENST00000494938 ZNF320A2RRD8 509 aa10.87□□□□□ -0.67
SCAP-213ENST00000494938 TMEM213A2RRL7 107 aa10.87□□□□□ -0.67
SCAP-213ENST00000494938 MT-CO2P00403 227 aa10.87□□□□□ -0.67
SCAP-213ENST00000494938 IGHV3-48P01763 117 aa10.87□□□□□ -0.67
SCAP-213ENST00000494938 CTSGP08311 255 aa10.87□□□□□ -0.67
SCAP-213ENST00000494938 RNASE2P10153 161 aaKnown RBP10.87□□□□□ -0.67
SCAP-213ENST00000494938 CBLN1P23435 193 aa10.87□□□□□ -0.67
SCAP-213ENST00000494938 ADMP35318 185 aa10.87□□□□□ -0.67
SCAP-213ENST00000494938 DCTN2Q13561 401 aaKnown RBP10.87□□□□□ -0.67
SCAP-213ENST00000494938 BSXQ3C1V8 233 aa10.87□□□□□ -0.67
SCAP-213ENST00000494938 TM4SF20Q53R12 229 aa10.87□□□□□ -0.67
SCAP-213ENST00000494938 TMEM128Q5BJH2 165 aa10.87□□□□□ -0.67
SCAP-213ENST00000494938 NMSQ5H8A3 153 aa10.87□□□□□ -0.67
SCAP-213ENST00000494938 BSCL2Q96G97 398 aaPredicted RBP10.87□□□□□ -0.67
SCAP-213ENST00000494938 A0A0B4J2A0 478 aa10.86□□□□□ -0.67
SCAP-213ENST00000494938 LINC00854A0A1B0GVQ3 168 aa10.86□□□□□ -0.67
SCAP-213ENST00000494938 ZNF785A8K8V0 405 aa10.86□□□□□ -0.67
SCAP-213ENST00000494938 C8orf88P0DMB2 117 aa10.86□□□□□ -0.67
SCAP-213ENST00000494938 FCGR2BP31994 310 aaPredicted RBP10.86□□□□□ -0.67
SCAP-213ENST00000494938 SNCAP37840 140 aa10.86□□□□□ -0.67
SCAP-213ENST00000494938 MFAP4P55083 255 aa10.86□□□□□ -0.67
SCAP-213ENST00000494938 ANKRD55Q3KP44 614 aa10.86□□□□□ -0.67
SCAP-213ENST00000494938 CD300EQ496F6 205 aaPredicted RBP10.86□□□□□ -0.67
SCAP-213ENST00000494938 TRIQKQ629K1 86 aa10.86□□□□□ -0.67
SCAP-213ENST00000494938 SPSB3Q6PJ21 355 aa10.86□□□□□ -0.67
SCAP-213ENST00000494938 LGI3Q8N145 548 aa10.86□□□□□ -0.67
SCAP-213ENST00000494938 OR2K2Q8NGT1 345 aa10.86□□□□□ -0.67
SCAP-213ENST00000494938 CACNG8Q8WXS5 425 aa10.86□□□□□ -0.67
SCAP-213ENST00000494938 PDCD10Q9BUL8 212 aa10.86□□□□□ -0.67
SCAP-213ENST00000494938 SHPKQ9UHJ6 478 aa10.86□□□□□ -0.67
SCAP-213ENST00000494938 SMAD5-AS1Q9Y6J3 95 aa10.86□□□□□ -0.67
SCAP-213ENST00000494938 NAP1L6A6NFF2 107 aa10.85□□□□□ -0.67
SCAP-213ENST00000494938 A8MWP6 167 aa10.85□□□□□ -0.67
SCAP-213ENST00000494938 SULT1A3P0DMM9 295 aa10.85□□□□□ -0.67
SCAP-213ENST00000494938 SULT1A4P0DMN0 295 aa10.85□□□□□ -0.67
SCAP-213ENST00000494938 ANXA3P12429 323 aa10.85□□□□□ -0.67
SCAP-213ENST00000494938 IL7P13232 177 aa10.85□□□□□ -0.67
SCAP-213ENST00000494938 BTCP35070 178 aa10.85□□□□□ -0.67
SCAP-213ENST00000494938 HOXA1P49639 335 aaPredicted RBP10.85□□□□□ -0.67
SCAP-213ENST00000494938 CD69Q07108 199 aa10.85□□□□□ -0.67
SCAP-213ENST00000494938 MLANAQ16655 118 aa10.85□□□□□ -0.67
SCAP-213ENST00000494938 Q56UQ5 140 aa10.85□□□□□ -0.67
SCAP-213ENST00000494938 C11orf87Q6NUJ2 197 aa10.85□□□□□ -0.67
SCAP-213ENST00000494938 UXS1Q8NBZ7 420 aa10.85□□□□□ -0.67
SCAP-213ENST00000494938 TXN2Q99757 166 aa10.85□□□□□ -0.67
SCAP-213ENST00000494938 TECRQ9NZ01 308 aaKnown RBP10.85□□□□□ -0.67
SCAP-213ENST00000494938 PLA2G10O15496 165 aa10.84□□□□□ -0.67
SCAP-213ENST00000494938 NDUFB6O95139 128 aa10.84□□□□□ -0.67
SCAP-213ENST00000494938 SFT2D2O95562 160 aa10.84□□□□□ -0.67
SCAP-213ENST00000494938 INPP1P49441 399 aa10.84□□□□□ -0.67
SCAP-213ENST00000494938 SUB1P53999 127 aaKnown RBP eCLIP10.84□□□□□ -0.67
SCAP-213ENST00000494938 ELLP55199 621 aaPredicted RBP10.84□□□□□ -0.67
SCAP-213ENST00000494938 SRPXP78539 464 aa10.84□□□□□ -0.67
SCAP-213ENST00000494938 PPP1R1AQ13522 171 aa10.84□□□□□ -0.67
SCAP-213ENST00000494938 RBMS2Q15434 407 aaKnown RBP10.84□□□□□ -0.67
SCAP-213ENST00000494938 CNPY1Q3B7I2 92 aa10.84□□□□□ -0.67
SCAP-213ENST00000494938 LCN12Q6JVE5 192 aa10.84□□□□□ -0.67
SCAP-213ENST00000494938 LRTM2Q8N967 370 aa10.84□□□□□ -0.67
SCAP-213ENST00000494938 UBAC2Q8NBM4 344 aa10.84□□□□□ -0.67
SCAP-213ENST00000494938 PINX1Q96BK5 328 aaKnown RBP10.84□□□□□ -0.67
SCAP-213ENST00000494938 FNDC4Q9H6D8 234 aaPredicted RBP10.84□□□□□ -0.67
SCAP-213ENST00000494938 ENY2Q9NPA8 101 aa10.84□□□□□ -0.67
SCAP-213ENST00000494938 MLXQ9UH92 298 aa10.84□□□□□ -0.67
SCAP-213ENST00000494938 FLVCR2Q9UPI3 526 aa10.84□□□□□ -0.67
SCAP-213ENST00000494938 SELENOKQ9Y6D0 94 aa10.84□□□□□ -0.67
SCAP-213ENST00000494938 SORL1Q92673 2214 aa10.83□□□□□ -0.68
SCAP-213ENST00000494938 A0A1B0GU03 582 aa10.83□□□□□ -0.68
SCAP-213ENST00000494938 NDUFA4O00483 81 aa10.83□□□□□ -0.68
SCAP-213ENST00000494938 PITX3O75364 302 aa10.83□□□□□ -0.68
SCAP-213ENST00000494938 SMCO1Q147U7 214 aa10.83□□□□□ -0.68
SCAP-213ENST00000494938 LINC00299Q6ZSB3 139 aa10.83□□□□□ -0.68
SCAP-213ENST00000494938 CENPSQ8N2Z9 138 aa10.83□□□□□ -0.68
SCAP-213ENST00000494938 TMEM170AQ8WVE7 144 aa10.83□□□□□ -0.68
SCAP-213ENST00000494938 TMEM190Q8WZ59 177 aa10.83□□□□□ -0.68
SCAP-213ENST00000494938 ASCL2Q99929 193 aa10.83□□□□□ -0.68
SCAP-213ENST00000494938 PALMDQ9NP74 551 aa10.83□□□□□ -0.68
SCAP-213ENST00000494938 HEYLQ9NQ87 328 aaPredicted RBP10.83□□□□□ -0.68
SCAP-213ENST00000494938 GAR1Q9NY12 217 aaKnown RBP10.83□□□□□ -0.68
SCAP-213ENST00000494938 MRPL36Q9P0J6 103 aaKnown RBP10.83□□□□□ -0.68
SCAP-213ENST00000494938 MRPL27Q9P0M9 148 aaKnown RBP10.83□□□□□ -0.68
SCAP-213ENST00000494938 UFC1Q9Y3C8 167 aa10.83□□□□□ -0.68
SCAP-213ENST00000494938 CEBPZOSA8MTT3 80 aa10.82□□□□□ -0.68
SCAP-213ENST00000494938 K7EMT4 169 aa10.82□□□□□ -0.68
SCAP-213ENST00000494938 NXPH3O95157 252 aa10.82□□□□□ -0.68
SCAP-213ENST00000494938 TMEM50AO95807 157 aa10.82□□□□□ -0.68
SCAP-213ENST00000494938 VAMP1P23763 118 aa10.82□□□□□ -0.68
SCAP-213ENST00000494938 HTR2BP41595 481 aa10.82□□□□□ -0.68
SCAP-213ENST00000494938 TNFRSF9Q07011 255 aa10.82□□□□□ -0.68
SCAP-213ENST00000494938 DUSP18Q8NEJ0 188 aa10.82□□□□□ -0.68
SCAP-213ENST00000494938 DYNLRB2Q8TF09 96 aa10.82□□□□□ -0.68
SCAP-213ENST00000494938 MARC2Q969Z3 335 aa10.82□□□□□ -0.68
SCAP-213ENST00000494938 C7orf50Q9BRJ6 194 aaKnown RBP10.82□□□□□ -0.68
SCAP-213ENST00000494938 C19orf73Q9NVV2 129 aa10.82□□□□□ -0.68
SCAP-213ENST00000494938 HSPB7Q9UBY9 170 aa10.82□□□□□ -0.68
SCAP-213ENST00000494938 CACFD1Q9UGQ2 172 aa10.82□□□□□ -0.68
SCAP-213ENST00000494938 IGHV3OR16-8A0A075B7F1 116 aa10.81□□□□□ -0.68
SCAP-213ENST00000494938 DUXBA0A1W2PPF3 345 aa10.81□□□□□ -0.68
SCAP-213ENST00000494938 C9orf170A2RU37 121 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms