RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 TMEM61Q8N0U2 210 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 VKORC1L1Q8N0U8 176 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 TTC9CQ8N5M4 171 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 NECAP1Q8NC96 275 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 BPIFB6Q8NFQ5 453 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 OR6M1Q8NGM8 313 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 OR10J5Q8NHC4 309 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 MAFIPQ8WZ33 124 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 TMEM203Q969S6 136 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 C2orf48Q96LS8 159 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 DCUN1D5Q9BTE7 237 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 GGTLC1Q9BX51 225 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 FNDC4Q9H6D8 234 aaPredicted RBP3.8□□□□□ -1.8
PTCD3-219ENST00000494323 ZNF430Q9H8G1 570 aaPredicted RBP3.8□□□□□ -1.8
PTCD3-219ENST00000494323 TECRQ9NZ01 308 aaKnown RBP3.8□□□□□ -1.8
PTCD3-219ENST00000494323 MLXQ9UH92 298 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 MGAT4AQ9UM21 535 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 AK6Q9Y3D8 172 aaKnown RBP3.8□□□□□ -1.8
PTCD3-219ENST00000494323 ETV7Q9Y603 341 aa3.8□□□□□ -1.8
PTCD3-219ENST00000494323 PLECQ15149 4684 aaKnown RBP3.79□□□□□ -1.8
PTCD3-219ENST00000494323 MUC4Q99102 2169 aa3.79□□□□□ -1.8
PTCD3-219ENST00000494323 KMT2AQ03164 3969 aa3.79□□□□□ -1.8
PTCD3-219ENST00000494323 A0A075B6Q4 140 aa3.79□□□□□ -1.8
PTCD3-219ENST00000494323 A0A087WYN8 130 aa3.79□□□□□ -1.8
PTCD3-219ENST00000494323 IGHV3-35A0A0C4DH35 117 aa3.79□□□□□ -1.8
PTCD3-219ENST00000494323 NUPR2A6NF83 97 aa3.79□□□□□ -1.8
PTCD3-219ENST00000494323 FAM223BA6NKX1 122 aa3.79□□□□□ -1.8
PTCD3-219ENST00000494323 FOXI3A8MTJ6 420 aaPredicted RBP3.79□□□□□ -1.8
PTCD3-219ENST00000494323 LGALS9O00182 355 aa3.79□□□□□ -1.8
PTCD3-219ENST00000494323 MYL12BO14950 172 aa3.79□□□□□ -1.8
PTCD3-219ENST00000494323 FABP7O15540 132 aa3.79□□□□□ -1.8
PTCD3-219ENST00000494323 AMBPP02760 352 aa3.79□□□□□ -1.8
PTCD3-219ENST00000494323 GNAO1P09471 354 aa3.79□□□□□ -1.8
PTCD3-219ENST00000494323 CD37P11049 281 aa3.79□□□□□ -1.8
PTCD3-219ENST00000494323 RPL35AP18077 110 aaKnown RBP3.79□□□□□ -1.8
PTCD3-219ENST00000494323 UBE2KP61086 200 aa3.79□□□□□ -1.8
PTCD3-219ENST00000494323 TNFRSF9Q07011 255 aa3.79□□□□□ -1.8
PTCD3-219ENST00000494323 DEFB135Q30KP9 77 aa3.79□□□□□ -1.8
PTCD3-219ENST00000494323 FAM106AQ4KMX7 169 aa3.79□□□□□ -1.8
PTCD3-219ENST00000494323 HSD17B12Q53GQ0 312 aa3.79□□□□□ -1.8
PTCD3-219ENST00000494323 TTC23Q5W5X9 447 aa3.79□□□□□ -1.8
PTCD3-219ENST00000494323 GPHB5Q86YW7 130 aa3.79□□□□□ -1.8
PTCD3-219ENST00000494323 FAM223AQ8IWN6 122 aa3.79□□□□□ -1.8
PTCD3-219ENST00000494323 MS4A15Q8N5U1 240 aa3.79□□□□□ -1.8
PTCD3-219ENST00000494323 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.79□□□□□ -1.8
PTCD3-219ENST00000494323 OR4A4PQ8NGN8 299 aa3.79□□□□□ -1.8
PTCD3-219ENST00000494323 TMEM190Q8WZ59 177 aa3.79□□□□□ -1.8
PTCD3-219ENST00000494323 PHYHIPQ92561 330 aa3.79□□□□□ -1.8
PTCD3-219ENST00000494323 PLGRKTQ9HBL7 147 aa3.79□□□□□ -1.8
PTCD3-219ENST00000494323 C12orf4Q9NQ89 552 aa3.79□□□□□ -1.8
PTCD3-219ENST00000494323 ALMS1Q8TCU4 4167 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 IGHV4-4A0A075B6R2 117 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 IGKV1D-8A0A087WSZ0 117 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 TRBV6-7A0A0A0MS04 114 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 A0A1B0GW64 132 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 TMEM213A2RRL7 107 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 SLC17A2O00624 439 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 DENRO43583 198 aaKnown RBP3.78□□□□□ -1.8
PTCD3-219ENST00000494323 REG1AP05451 166 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 UCHL1P09936 223 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 SAA1P0DJI8 122 aaPredicted RBP3.78□□□□□ -1.8
PTCD3-219ENST00000494323 RRASP10301 218 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 RPA2P15927 270 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 GNB3P16520 340 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 MT3P25713 68 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 CALRP27797 417 aaKnown RBP3.78□□□□□ -1.8
PTCD3-219ENST00000494323 BMI1P35226 326 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 SERPINB10P48595 397 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 MRPS15P82914 257 aaKnown RBP3.78□□□□□ -1.8
PTCD3-219ENST00000494323 TPBGQ13641 420 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 SPHARQ15513 63 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 RAB11BQ15907 218 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 ANKRD55Q3KP44 614 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 LRRC37A5PQ49AS3 106 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 OR2B11Q5JQS5 317 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 LIPKQ5VXJ0 399 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 UNQ9165/PRO28630Q6UXU0 137 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 TMEM91Q6ZNR0 172 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 DHRSXQ8N5I4 330 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 OR10G8Q8NGN5 311 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 FAM3DQ96BQ1 224 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 SPIN2AQ99865 258 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 SPIN2BQ9BPZ2 258 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 GINS4Q9BRT9 223 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 OR51E2Q9H255 320 aa3.78□□□□□ -1.8
PTCD3-219ENST00000494323 KLK5Q9Y337 293 aaPredicted RBP3.78□□□□□ -1.8
PTCD3-219ENST00000494323 IGHV3OR16-8A0A075B7F1 116 aa3.77□□□□□ -1.81
PTCD3-219ENST00000494323 MFSD2BA6NFX1 497 aa3.77□□□□□ -1.81
PTCD3-219ENST00000494323 FCGR3AP08637 254 aa3.77□□□□□ -1.81
PTCD3-219ENST00000494323 HSMCR30P0CW71 290 aa3.77□□□□□ -1.81
PTCD3-219ENST00000494323 DEFA4P12838 97 aa3.77□□□□□ -1.81
PTCD3-219ENST00000494323 NFYAP23511 347 aaPredicted RBP3.77□□□□□ -1.81
PTCD3-219ENST00000494323 CRHBPP24387 322 aa3.77□□□□□ -1.81
PTCD3-219ENST00000494323 RPL30P62888 115 aaKnown RBP3.77□□□□□ -1.81
PTCD3-219ENST00000494323 MEF2DQ14814 521 aa3.77□□□□□ -1.81
PTCD3-219ENST00000494323 CDK10Q15131 360 aa3.77□□□□□ -1.81
PTCD3-219ENST00000494323 HES5Q5TA89 166 aa3.77□□□□□ -1.81
PTCD3-219ENST00000494323 LGALS9CQ6DKI2 356 aa3.77□□□□□ -1.81
PTCD3-219ENST00000494323 SSX9Q7RTT3 188 aa3.77□□□□□ -1.81
PTCD3-219ENST00000494323 SLC25A42Q86VD7 318 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms