RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 KIR2DL5BA0A0G2JPC4 375 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 SMIM9A6NGZ8 99 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 IFITM10A6NMD0 228 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 APOA2P02652 100 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 PPIAL4GP0DN37 164 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 IGHV1-8P0DP01 117 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 HOXA5P20719 270 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 NPBWR1P48145 328 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 REG1BP48304 166 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 BAXQ07812 192 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 POU2AF1Q16633 256 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 HAGHQ16775 308 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 PRR31Q5SQ13 230 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 ZNF833PQ6ZTB9 187 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 H2BFWTQ7Z2G1 175 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 KIR2DL5AQ8N109 375 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 KIR2DL5BQ8NHK3 375 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 GPR146Q96CH1 333 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 NOL4LQ96MY1 436 aaPredicted RBP5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 CIB3Q96Q77 187 aaPredicted RBP5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 CCL19Q99731 98 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 PRR13Q9NZ81 148 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 LSM5Q9Y4Y9 91 aaKnown RBP5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 PKD1L2Q7Z442 2459 aa5.45□□□□□ -1.54
FNDC3B-212ENST00000494000 LOC105371242A0A075B767 164 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 RNF222A6NCQ9 220 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 J3QR06 171 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 ADCYAP1P18509 176 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 RPL12P30050 165 aaKnown RBP5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 CKS1BP61024 79 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 EWSR1Q01844 656 aaKnown RBP eCLIP5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 C10orf91Q5T1B1 145 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 SAMD13Q5VXD3 122 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 C12orf54Q6X4T0 127 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 C15orf54Q8N8G6 183 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 DDB2Q92466 427 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 CLEC7AQ9BXN2 247 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 ZFAND3Q9H8U3 227 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 PSG8Q9UQ74 426 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 WSB1Q9Y6I7 421 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 CACNA1DQ01668 2161 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 SAA2-SAA4A0A096LPE2 208 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 BORCS7-ASMTA0A0B4J1R7 106 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 A0A1W2PPR1 153 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 H0YIZ8 118 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 FGF16O43320 207 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 FOXH1O75593 365 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 JTBO76095 146 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 PRB1P04280 392 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 P0C879 139 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 SAA2P0DJI9 122 aaPredicted RBP5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 TPT1P13693 172 aaKnown RBP5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 CDX1P47902 265 aaPredicted RBP5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 OR2B8PP59922 312 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 ATP6V1FQ16864 119 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 MIDNQ504T8 468 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 PDPNQ86YL7 162 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 OSR1Q8TAX0 266 aaPredicted RBP5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 HIST1H2BAQ96A08 127 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 CLCC1Q96S66 551 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 FKBP11Q9NYL4 201 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 RCL1Q9Y2P8 373 aaKnown RBP5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 CARHSP1Q9Y2V2 147 aaKnown RBP5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 KIAA2026Q5HYC2 2103 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 LYNX1G3V0Z9 82 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 M0R143 59 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 YIF1AO95070 293 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 IGKV1-39P01597 117 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 IGKV1-5P01602 117 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 IGKV1D-39P04432 117 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 LYNX1P0DP58 116 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 CCL3L1P16619 93 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 RPL30P62888 115 aaKnown RBP5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 RPEL1Q2QD12 228 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 ODF3L1Q8IXM7 274 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 ABHD12Q8N2K0 398 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 OR4A5Q8NH83 315 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 VSTM2AQ8TAG5 236 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 PINX1Q96BK5 328 aaKnown RBP5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 SMIM8Q96KF7 97 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 LYRM2Q9NU23 88 aaPredicted RBP5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 OR5AC2Q9NZP5 309 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 CACNG5Q9UF02 275 aa5.44□□□□□ -1.54
FNDC3B-212ENST00000494000 DIDO1Q9BTC0 2240 aaKnown RBP5.43□□□□□ -1.54
FNDC3B-212ENST00000494000 CHD8Q9HCK8 2581 aa5.43□□□□□ -1.54
FNDC3B-212ENST00000494000 ANKHD1Q8IWZ3 2542 aaKnown RBP5.43□□□□□ -1.54
FNDC3B-212ENST00000494000 LINC00473A8K010 186 aa5.43□□□□□ -1.54
FNDC3B-212ENST00000494000 OOSP1A8MZH6 123 aa5.43□□□□□ -1.54
FNDC3B-212ENST00000494000 SYNGR2O43760 224 aa5.43□□□□□ -1.54
FNDC3B-212ENST00000494000 IFNA17P01571 189 aa5.43□□□□□ -1.54
FNDC3B-212ENST00000494000 HKR1P10072 659 aa5.43□□□□□ -1.54
FNDC3B-212ENST00000494000 SERTAD4-AS1Q5TG53 156 aa5.43□□□□□ -1.54
FNDC3B-212ENST00000494000 SP5Q6BEB4 398 aaPredicted RBP5.43□□□□□ -1.54
FNDC3B-212ENST00000494000 OR10D4PQ8NGN7 298 aa5.43□□□□□ -1.54
FNDC3B-212ENST00000494000 OR1P1Q8NH06 330 aa5.43□□□□□ -1.54
FNDC3B-212ENST00000494000 RPEQ96AT9 228 aa5.43□□□□□ -1.54
FNDC3B-212ENST00000494000 RNF5Q99942 180 aa5.43□□□□□ -1.54
FNDC3B-212ENST00000494000 C11orf1Q9H5F2 150 aa5.43□□□□□ -1.54
FNDC3B-212ENST00000494000 SPENQ96T58 3664 aaKnown RBP5.43□□□□□ -1.54
FNDC3B-212ENST00000494000 S1PR2O95136 353 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms