RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 CD40P25942 277 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 PSG7Q13046 419 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 IL13RA2Q14627 380 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 LRRC37A5PQ49AS3 106 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 TEX29Q8N6K0 151 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 VSTM2AQ8TAG5 236 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 OR2D2Q9H210 308 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 POLDIP2Q9Y2S7 368 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 WASHC3Q9Y3C0 194 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 TEX15Q9BXT5 2789 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 ROS1P08922 2347 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 TRAV1-2A0A0B4J238 106 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 IGHV1-18A0A0C4DH31 117 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 FAM231BA6NCW3 169 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 C17orf112F2Z3M2 114 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 H0YL77 283 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 RER1O15258 196 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 ZNF253O75346 499 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 OR7C1O76099 320 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-222ENST00000493919 TTRP02766 147 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 TACSTD2P09758 323 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 NHLRC4P0CG21 123 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-222ENST00000493919 NTF3P20783 257 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 LOXP28300 417 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-222ENST00000493919 MSMO1Q15800 293 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 LCN15Q6UWW0 184 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 PRSS45Q7RTY3 260 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 C16orf82Q7Z2V1 217 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 FAM19A5Q7Z5A7 132 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-222ENST00000493919 FAM219AQ8IW50 185 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 FGFBP3Q8TAT2 258 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 NABP1Q96AH0 204 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 KCNS2Q9ULS6 477 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 POLR1DQ9Y2S0 133 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 SOX21Q9Y651 276 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-222ENST00000493919 CADP27708 2225 aa9.58□□□□□ -0.88
BRCA1-222ENST00000493919 SPG11Q96JI7 2443 aa9.57□□□□□ -0.88
BRCA1-222ENST00000493919 TINCRA0A1B0GVN0 87 aa9.57□□□□□ -0.88
BRCA1-222ENST00000493919 CYSRT1A8MQ03 144 aa9.57□□□□□ -0.88
BRCA1-222ENST00000493919 IGKV3-15P01624 115 aa9.57□□□□□ -0.88
BRCA1-222ENST00000493919 HLA-DQA2P01906 255 aa9.57□□□□□ -0.88
BRCA1-222ENST00000493919 GYPBP06028 91 aa9.57□□□□□ -0.88
BRCA1-222ENST00000493919 CECR9P0C854 216 aa9.57□□□□□ -0.88
BRCA1-222ENST00000493919 CATR1Q13166 79 aa9.57□□□□□ -0.88
BRCA1-222ENST00000493919 MPV17L2Q567V2 206 aa9.57□□□□□ -0.88
BRCA1-222ENST00000493919 ZNF506Q5JVG8 444 aa9.57□□□□□ -0.88
BRCA1-222ENST00000493919 ZNF880Q6PDB4 577 aa9.57□□□□□ -0.88
BRCA1-222ENST00000493919 OR51A4Q8NGJ6 313 aa9.57□□□□□ -0.88
BRCA1-222ENST00000493919 NEUROG1Q92886 237 aa9.57□□□□□ -0.88
BRCA1-222ENST00000493919 KCNK15Q9H427 330 aa9.57□□□□□ -0.88
BRCA1-222ENST00000493919 MAP1LC3AQ9H492 121 aa9.57□□□□□ -0.88
BRCA1-222ENST00000493919 ISG20L2Q9H9L3 353 aaKnown RBP9.57□□□□□ -0.88
BRCA1-222ENST00000493919 PRO0628Q9UI54 55 aa9.57□□□□□ -0.88
BRCA1-222ENST00000493919 DUSP13Q9UII6 198 aa9.57□□□□□ -0.88
BRCA1-222ENST00000493919 NOP16Q9Y3C1 178 aaKnown RBP9.57□□□□□ -0.88
BRCA1-222ENST00000493919 TRAV9-2A0A087WT02 112 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 F8W1H4 67 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 CRYAAP02489 173 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 FAM106CPP0CH98 169 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 TAS2R46P59540 309 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 PDCD1Q15116 288 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 FAM106AQ4KMX7 169 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 OR13A1Q8NGR1 328 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 SYNPRQ8TBG9 265 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 TM2D2Q9BX73 214 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 IFI27L2Q9H2X8 130 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 LIME1Q9H400 295 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 CMC2Q9NRP2 79 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 SPANXB1Q9NS25 103 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-222ENST00000493919 SIGLEC8Q9NYZ4 499 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 IGLV1-36A0A0B4J1U3 117 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 VWC2LB2RUY7 222 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 TMEM250H0YL14 139 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 M0R129 80 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 SLC25A6P12236 298 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 ZNF32P17041 273 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 RPL7P18124 248 aaKnown RBP9.56□□□□□ -0.88
BRCA1-222ENST00000493919 ORM2P19652 201 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 ZNF93P35789 620 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-222ENST00000493919 SRSF2Q01130 221 aaKnown RBP9.56□□□□□ -0.88
BRCA1-222ENST00000493919 ZNF415Q09FC8 603 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 GLYATL3Q5SZD4 288 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 FOXL2NBQ6ZUU3 175 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 OR6K6Q8NGW6 343 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 TMEM204Q9BSN7 226 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 RNF126Q9BV68 326 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 B9D1Q9UPM9 204 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 LSM5Q9Y4Y9 91 aaKnown RBP9.56□□□□□ -0.88
BRCA1-222ENST00000493919 LINC00312Q9Y6C7 94 aa9.56□□□□□ -0.88
BRCA1-222ENST00000493919 NAV2Q8IVL1 2488 aa9.55□□□□□ -0.88
BRCA1-222ENST00000493919 MAST4O15021 2626 aa9.55□□□□□ -0.88
BRCA1-222ENST00000493919 H0YJW9 148 aa9.55□□□□□ -0.88
BRCA1-222ENST00000493919 IGLV1-44P01699 117 aa9.55□□□□□ -0.88
BRCA1-222ENST00000493919 FUT6P51993 359 aa9.55□□□□□ -0.88
BRCA1-222ENST00000493919 TBC1D28Q2M2D7 210 aa9.55□□□□□ -0.88
BRCA1-222ENST00000493919 FAM27BQ5VT28 67 aa9.55□□□□□ -0.88
BRCA1-222ENST00000493919 ADAMTSL5Q6ZMM2 481 aa9.55□□□□□ -0.88
BRCA1-222ENST00000493919 SIGLECL1Q8N7X8 197 aa9.55□□□□□ -0.88
BRCA1-222ENST00000493919 PLEKHF2Q9H8W4 249 aa9.55□□□□□ -0.88
BRCA1-222ENST00000493919 TVP23BQ9NYZ1 205 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 1098.3 ms