RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 FAM3BP58499 235 aaPredicted RBP11.25□□□□□ -0.61
VCP-207ENST00000493886 PDLIM3Q53GG5 364 aaPredicted RBP11.25□□□□□ -0.61
VCP-207ENST00000493886 ACTR3CQ9C0K3 210 aaPredicted RBP11.25□□□□□ -0.61
VCP-207ENST00000493886 ZNRD1Q9P1U0 126 aa11.25□□□□□ -0.61
VCP-207ENST00000493886 FUT9Q9Y231 359 aa11.25□□□□□ -0.61
VCP-207ENST00000493886 C11orf94C9JXX5 98 aa11.25□□□□□ -0.61
VCP-207ENST00000493886 CCL21O00585 134 aa11.25□□□□□ -0.61
VCP-207ENST00000493886 TNFRSF13BO14836 293 aaPredicted RBP11.25□□□□□ -0.61
VCP-207ENST00000493886 CCL3L1P16619 93 aa11.25□□□□□ -0.61
VCP-207ENST00000493886 VDAC2P45880 294 aaPredicted RBP11.25□□□□□ -0.61
VCP-207ENST00000493886 ATP5G3P48201 142 aa11.25□□□□□ -0.61
VCP-207ENST00000493886 LYPD2Q6UXB3 125 aa11.25□□□□□ -0.61
VCP-207ENST00000493886 ZNF714Q96N38 554 aa11.25□□□□□ -0.61
VCP-207ENST00000493886 HEYLQ9NQ87 328 aaPredicted RBP11.25□□□□□ -0.61
VCP-207ENST00000493886 ADGRG4Q8IZF6 3080 aa11.25□□□□□ -0.61
VCP-207ENST00000493886 A0A0U1RQK1 487 aa11.25□□□□□ -0.61
VCP-207ENST00000493886 PLAUP00749 431 aa11.25□□□□□ -0.61
VCP-207ENST00000493886 NPPCP23582 126 aa11.25□□□□□ -0.61
VCP-207ENST00000493886 EFNB3Q15768 340 aa11.25□□□□□ -0.61
VCP-207ENST00000493886 TMEM200BQ69YZ2 307 aa11.25□□□□□ -0.61
VCP-207ENST00000493886 OR4A47Q6IF82 309 aa11.25□□□□□ -0.61
VCP-207ENST00000493886 CTDSP1Q9GZU7 261 aa11.25□□□□□ -0.61
VCP-207ENST00000493886 TCF19Q9Y242 345 aa11.25□□□□□ -0.61
VCP-207ENST00000493886 C15orf61A6NNL5 157 aa11.24□□□□□ -0.61
VCP-207ENST00000493886 NDUFB3O43676 98 aa11.24□□□□□ -0.61
VCP-207ENST00000493886 CT45A6P0DMU7 189 aa11.24□□□□□ -0.61
VCP-207ENST00000493886 CT45A5P0DMU8 189 aa11.24□□□□□ -0.61
VCP-207ENST00000493886 CT45A7P0DMV0 189 aa11.24□□□□□ -0.61
VCP-207ENST00000493886 FBXL19-AS1Q494R0 122 aa11.24□□□□□ -0.61
VCP-207ENST00000493886 LRRC10Q5BKY1 277 aa11.24□□□□□ -0.61
VCP-207ENST00000493886 H1FXQ92522 213 aaKnown RBP11.24□□□□□ -0.61
VCP-207ENST00000493886 F6UZH7 168 aa11.24□□□□□ -0.61
VCP-207ENST00000493886 AMBPP02760 352 aa11.24□□□□□ -0.61
VCP-207ENST00000493886 GRNP28799 593 aaKnown RBP11.24□□□□□ -0.61
VCP-207ENST00000493886 Q6ZVH6 145 aa11.24□□□□□ -0.61
VCP-207ENST00000493886 SRD5A3Q9H8P0 318 aa11.24□□□□□ -0.61
VCP-207ENST00000493886 PITPNC1Q9UKF7 332 aa11.24□□□□□ -0.61
VCP-207ENST00000493886 TPRP12270 2363 aaKnown RBP11.23□□□□□ -0.61
VCP-207ENST00000493886 OR4C5Q8NGB2 326 aa11.23□□□□□ -0.61
VCP-207ENST00000493886 NEIL1Q96FI4 390 aaPredicted RBP11.23□□□□□ -0.61
VCP-207ENST00000493886 SLC35D1Q9NTN3 355 aa11.23□□□□□ -0.61
VCP-207ENST00000493886 CTSZQ9UBR2 303 aa11.23□□□□□ -0.61
VCP-207ENST00000493886 A0A1B0GUS0 222 aa11.23□□□□□ -0.61
VCP-207ENST00000493886 RRHO14718 337 aa11.23□□□□□ -0.61
VCP-207ENST00000493886 HRASP01112 189 aa11.23□□□□□ -0.61
VCP-207ENST00000493886 POU2AF1Q16633 256 aa11.23□□□□□ -0.61
VCP-207ENST00000493886 FAM78BQ5VT40 261 aa11.23□□□□□ -0.61
VCP-207ENST00000493886 OR1P1Q8NH06 330 aa11.23□□□□□ -0.61
VCP-207ENST00000493886 FOXA2Q9Y261 457 aaPredicted RBP11.23□□□□□ -0.61
VCP-207ENST00000493886 IGHV1-69-2A0A0G2JMI3 117 aa11.22□□□□□ -0.61
VCP-207ENST00000493886 TMEM250H0YL14 139 aa11.22□□□□□ -0.61
VCP-207ENST00000493886 DVL1O14640 695 aa11.22□□□□□ -0.61
VCP-207ENST00000493886 CD1BP29016 333 aa11.22□□□□□ -0.61
VCP-207ENST00000493886 TMEM183AQ8IXX5 376 aa11.22□□□□□ -0.61
VCP-207ENST00000493886 CACNG8Q8WXS5 425 aa11.22□□□□□ -0.61
VCP-207ENST00000493886 TMEM14BQ9NUH8 114 aa11.22□□□□□ -0.61
VCP-207ENST00000493886 NDUFB4O95168 129 aa11.22□□□□□ -0.61
VCP-207ENST00000493886 LIPFP07098 398 aa11.22□□□□□ -0.61
VCP-207ENST00000493886 C1QTNF9P0C862 333 aa11.22□□□□□ -0.61
VCP-207ENST00000493886 RTL8BQ17RB0 113 aa11.22□□□□□ -0.61
VCP-207ENST00000493886 ZNF833PQ6ZTB9 187 aa11.22□□□□□ -0.61
VCP-207ENST00000493886 ABHD12Q8N2K0 398 aa11.22□□□□□ -0.61
VCP-207ENST00000493886 ZNF114Q8NC26 417 aa11.22□□□□□ -0.61
VCP-207ENST00000493886 SSMEM1Q8WWF3 244 aa11.22□□□□□ -0.61
VCP-207ENST00000493886 HINT2Q9BX68 163 aa11.22□□□□□ -0.61
VCP-207ENST00000493886 KAAG1Q9UBP8 84 aa11.22□□□□□ -0.61
VCP-207ENST00000493886 HSPE1P61604 102 aaKnown RBP11.22□□□□□ -0.61
VCP-207ENST00000493886 OCIAD2Q56VL3 154 aa11.22□□□□□ -0.61
VCP-207ENST00000493886 MANBALQ9NQG1 85 aa11.22□□□□□ -0.61
VCP-207ENST00000493886 WDR83OSQ9Y284 106 aa11.22□□□□□ -0.61
VCP-207ENST00000493886 C17orf112F2Z3M2 114 aa11.21□□□□□ -0.61
VCP-207ENST00000493886 IGKV1-16P04430 117 aa11.21□□□□□ -0.61
VCP-207ENST00000493886 LOXP28300 417 aaPredicted RBP11.21□□□□□ -0.61
VCP-207ENST00000493886 CRYBA4P53673 196 aa11.21□□□□□ -0.61
VCP-207ENST00000493886 GNB1P62873 340 aa11.21□□□□□ -0.61
VCP-207ENST00000493886 COL5A1-AS1Q5SY13 56 aa11.21□□□□□ -0.61
VCP-207ENST00000493886 KALRNO60229 2985 aa11.21□□□□□ -0.61
VCP-207ENST00000493886 A0A1W2PPV4 95 aa11.21□□□□□ -0.62
VCP-207ENST00000493886 ADORA2A-AS1P86434 159 aa11.21□□□□□ -0.62
VCP-207ENST00000493886 MIC13Q5XKP0 118 aa11.21□□□□□ -0.62
VCP-207ENST00000493886 OR2T10Q8NGZ9 312 aa11.21□□□□□ -0.62
VCP-207ENST00000493886 TMEM170AQ8WVE7 144 aa11.21□□□□□ -0.62
VCP-207ENST00000493886 SPTBN4Q9H254 2564 aa11.21□□□□□ -0.62
VCP-207ENST00000493886 PRSS46E5RG02 174 aa11.2□□□□□ -0.62
VCP-207ENST00000493886 CLEC3BP05452 202 aa11.2□□□□□ -0.62
VCP-207ENST00000493886 PMS2P11Q13670 270 aa11.2□□□□□ -0.62
VCP-207ENST00000493886 ACOT6Q3I5F7 207 aaPredicted RBP11.2□□□□□ -0.62
VCP-207ENST00000493886 Q8N7P7 452 aa11.2□□□□□ -0.62
VCP-207ENST00000493886 CITED1Q99966 193 aa11.2□□□□□ -0.62
VCP-207ENST00000493886 MRPL20Q9BYC9 149 aaKnown RBP11.2□□□□□ -0.62
VCP-207ENST00000493886 TRAV26-1A0A087WT03 109 aa11.2□□□□□ -0.62
VCP-207ENST00000493886 SRRM4A7MD48 611 aaKnown RBP11.2□□□□□ -0.62
VCP-207ENST00000493886 ARL14EPLP0DKL9 152 aa11.2□□□□□ -0.62
VCP-207ENST00000493886 UBE2V1Q13404 147 aa11.2□□□□□ -0.62
VCP-207ENST00000493886 CDSNQ15517 529 aa11.2□□□□□ -0.62
VCP-207ENST00000493886 MUC15Q8N387 334 aa11.2□□□□□ -0.62
VCP-207ENST00000493886 SMIM12Q96EX1 92 aa11.2□□□□□ -0.62
VCP-207ENST00000493886 ENY2Q9NPA8 101 aa11.2□□□□□ -0.62
VCP-207ENST00000493886 PRNDQ9UKY0 176 aa11.2□□□□□ -0.62
VCP-207ENST00000493886 OR51B2Q9Y5P1 312 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms