RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 LYSMD2Q8IV50 215 aa12.71□□□□□ -0.37
COL9A1-210ENST00000493682 ZNF114Q8NC26 417 aa12.71□□□□□ -0.37
COL9A1-210ENST00000493682 Q9H521 79 aa12.71□□□□□ -0.37
COL9A1-210ENST00000493682 HERC2O95714 4834 aa12.7□□□□□ -0.38
COL9A1-210ENST00000493682 GNG7O60262 68 aa12.7□□□□□ -0.38
COL9A1-210ENST00000493682 CA1P00915 261 aaPredicted RBP12.7□□□□□ -0.38
COL9A1-210ENST00000493682 HRH1P35367 487 aa12.7□□□□□ -0.38
COL9A1-210ENST00000493682 TGFBR1P36897 503 aa12.7□□□□□ -0.38
COL9A1-210ENST00000493682 PRCDQ00LT1 54 aa12.7□□□□□ -0.38
COL9A1-210ENST00000493682 TOMM20LQ6UXN7 152 aa12.7□□□□□ -0.38
COL9A1-210ENST00000493682 OR4A16Q8NH70 328 aa12.7□□□□□ -0.38
COL9A1-210ENST00000493682 PINX1Q96BK5 328 aaKnown RBP12.7□□□□□ -0.38
COL9A1-210ENST00000493682 SEC22AQ96IW7 307 aa12.7□□□□□ -0.38
COL9A1-210ENST00000493682 FAM212BQ9NTI7 297 aaPredicted RBP12.7□□□□□ -0.38
COL9A1-210ENST00000493682 DNAH10Q8IVF4 4471 aa12.69□□□□□ -0.38
COL9A1-210ENST00000493682 IGKV1-39P01597 117 aa12.69□□□□□ -0.38
COL9A1-210ENST00000493682 APOHP02749 345 aaPredicted RBP12.69□□□□□ -0.38
COL9A1-210ENST00000493682 IGKV1D-39P04432 117 aa12.69□□□□□ -0.38
COL9A1-210ENST00000493682 CD5P06127 495 aa12.69□□□□□ -0.38
COL9A1-210ENST00000493682 HLA-DMAP28067 261 aa12.69□□□□□ -0.38
COL9A1-210ENST00000493682 PRSS3P35030 304 aa12.69□□□□□ -0.38
COL9A1-210ENST00000493682 TMEM187Q14656 261 aa12.69□□□□□ -0.38
COL9A1-210ENST00000493682 H2BFWTQ7Z2G1 175 aa12.69□□□□□ -0.38
COL9A1-210ENST00000493682 TBC1D26Q86UD7 250 aa12.69□□□□□ -0.38
COL9A1-210ENST00000493682 CROCCP3Q8IVE0 287 aa12.69□□□□□ -0.38
COL9A1-210ENST00000493682 LILRB2Q8N423 598 aa12.69□□□□□ -0.38
COL9A1-210ENST00000493682 SAMD12Q8N8I0 201 aa12.69□□□□□ -0.38
COL9A1-210ENST00000493682 C2CD4CQ8TF44 421 aa12.69□□□□□ -0.38
COL9A1-210ENST00000493682 ST8SIA2Q92186 375 aa12.69□□□□□ -0.38
COL9A1-210ENST00000493682 GINS3Q9BRX5 216 aa12.69□□□□□ -0.38
COL9A1-210ENST00000493682 MS4A6AQ9H2W1 248 aa12.69□□□□□ -0.38
COL9A1-210ENST00000493682 VSIRQ9H7M9 311 aa12.69□□□□□ -0.38
COL9A1-210ENST00000493682 EIF4EP06730 217 aaKnown RBP12.68□□□□□ -0.38
COL9A1-210ENST00000493682 S100GP29377 79 aa12.68□□□□□ -0.38
COL9A1-210ENST00000493682 DEFB131AP59861 70 aa12.68□□□□□ -0.38
COL9A1-210ENST00000493682 LEMD1Q68G75 181 aa12.68□□□□□ -0.38
COL9A1-210ENST00000493682 LPCAT3Q6P1A2 487 aa12.68□□□□□ -0.38
COL9A1-210ENST00000493682 IGHV3-66A0A0C4DH42 116 aa12.67□□□□□ -0.38
COL9A1-210ENST00000493682 DNASE2O00115 360 aaPredicted RBP12.67□□□□□ -0.38
COL9A1-210ENST00000493682 ST8SIA3O43173 380 aa12.67□□□□□ -0.38
COL9A1-210ENST00000493682 DFFBO76075 338 aa12.67□□□□□ -0.38
COL9A1-210ENST00000493682 RPS19P39019 145 aaKnown RBP12.67□□□□□ -0.38
COL9A1-210ENST00000493682 TCTAP57738 103 aa12.67□□□□□ -0.38
COL9A1-210ENST00000493682 HSPE1P61604 102 aaKnown RBP12.67□□□□□ -0.38
COL9A1-210ENST00000493682 TSPAN5P62079 268 aa12.67□□□□□ -0.38
COL9A1-210ENST00000493682 ERHP84090 104 aaKnown RBP12.67□□□□□ -0.38
COL9A1-210ENST00000493682 FAM24BQ8N5W8 94 aa12.67□□□□□ -0.38
COL9A1-210ENST00000493682 MRGPRFQ96AM1 343 aa12.67□□□□□ -0.38
COL9A1-210ENST00000493682 ATP6V1G2O95670 118 aa12.66□□□□□ -0.38
COL9A1-210ENST00000493682 NPBWR1P48145 328 aa12.66□□□□□ -0.38
COL9A1-210ENST00000493682 RPL11P62913 178 aaKnown RBP12.66□□□□□ -0.38
COL9A1-210ENST00000493682 SPINK9Q5DT21 86 aa12.66□□□□□ -0.38
COL9A1-210ENST00000493682 DUSP18Q8NEJ0 188 aa12.66□□□□□ -0.38
COL9A1-210ENST00000493682 GPX8Q8TED1 209 aa12.66□□□□□ -0.38
COL9A1-210ENST00000493682 ZFAND3Q9H8U3 227 aa12.66□□□□□ -0.38
COL9A1-210ENST00000493682 PUS1Q9Y606 427 aaKnown RBP eCLIP12.66□□□□□ -0.38
COL9A1-210ENST00000493682 HECTD4Q9Y4D8 3996 aa12.65□□□□□ -0.38
COL9A1-210ENST00000493682 TRAV2A0A0B4J234 112 aa12.65□□□□□ -0.38
COL9A1-210ENST00000493682 IGLL5B9A064 214 aa12.65□□□□□ -0.38
COL9A1-210ENST00000493682 IZUMO4Q1ZYL8 232 aa12.65□□□□□ -0.38
COL9A1-210ENST00000493682 ZNF600Q6ZNG1 722 aa12.65□□□□□ -0.38
COL9A1-210ENST00000493682 Q8NAQ8 132 aa12.65□□□□□ -0.38
COL9A1-210ENST00000493682 APLNQ9ULZ1 77 aa12.65□□□□□ -0.38
COL9A1-210ENST00000493682 A0A1B0GU03 582 aa12.64□□□□□ -0.39
COL9A1-210ENST00000493682 TMEM50AO95807 157 aa12.64□□□□□ -0.39
COL9A1-210ENST00000493682 GIG44P09565 113 aaPredicted RBP12.64□□□□□ -0.39
COL9A1-210ENST00000493682 UCP3P55916 312 aa12.64□□□□□ -0.39
COL9A1-210ENST00000493682 STHQ8IWL8 128 aa12.64□□□□□ -0.39
COL9A1-210ENST00000493682 HRH4Q9H3N8 390 aa12.64□□□□□ -0.39
COL9A1-210ENST00000493682 C11orf94C9JXX5 98 aa12.63□□□□□ -0.39
COL9A1-210ENST00000493682 RBMY1A1P0DJD3 496 aaKnown RBP12.63□□□□□ -0.39
COL9A1-210ENST00000493682 RBMY1CP0DJD4 496 aa12.63□□□□□ -0.39
COL9A1-210ENST00000493682 SNCAP37840 140 aa12.63□□□□□ -0.39
COL9A1-210ENST00000493682 LSM3P62310 102 aaKnown RBP12.63□□□□□ -0.39
COL9A1-210ENST00000493682 RBMY1FQ15415 496 aaKnown RBP12.63□□□□□ -0.39
COL9A1-210ENST00000493682 KCTD21Q4G0X4 260 aa12.63□□□□□ -0.39
COL9A1-210ENST00000493682 TMEM231Q9H6L2 316 aa12.63□□□□□ -0.39
COL9A1-210ENST00000493682 RABAC1Q9UI14 185 aa12.63□□□□□ -0.39
COL9A1-210ENST00000493682 VPS13DQ5THJ4 4388 aa12.63□□□□□ -0.39
COL9A1-210ENST00000493682 IGHV4-28A0A0C4DH34 117 aa12.62□□□□□ -0.39
COL9A1-210ENST00000493682 IGKV1-5P01602 117 aa12.62□□□□□ -0.39
COL9A1-210ENST00000493682 NPPCP23582 126 aa12.62□□□□□ -0.39
COL9A1-210ENST00000493682 PVRIGQ6DKI7 326 aa12.62□□□□□ -0.39
COL9A1-210ENST00000493682 TRPT1Q86TN4 253 aaKnown RBP12.62□□□□□ -0.39
COL9A1-210ENST00000493682 YIPF6Q96EC8 236 aa12.62□□□□□ -0.39
COL9A1-210ENST00000493682 SCPEP1Q9HB40 452 aa12.62□□□□□ -0.39
COL9A1-210ENST00000493682 PCLOQ9Y6V0 5065 aa12.61□□□□□ -0.39
COL9A1-210ENST00000493682 A0A0B4J293 547 aa12.61□□□□□ -0.39
COL9A1-210ENST00000493682 INS-IGF2F8WCM5 200 aa12.61□□□□□ -0.39
COL9A1-210ENST00000493682 K7EQG2 157 aa12.61□□□□□ -0.39
COL9A1-210ENST00000493682 RCVRNP35243 200 aa12.61□□□□□ -0.39
COL9A1-210ENST00000493682 SNX29P2Q8IUI4 249 aa12.61□□□□□ -0.39
COL9A1-210ENST00000493682 SLC35G3Q8N808 338 aa12.61□□□□□ -0.39
COL9A1-210ENST00000493682 MRPL36Q9P0J6 103 aaKnown RBP12.61□□□□□ -0.39
COL9A1-210ENST00000493682 SMIM31A0A1B0GVY4 71 aa12.6□□□□□ -0.39
COL9A1-210ENST00000493682 M0QYG6 137 aa12.6□□□□□ -0.39
COL9A1-210ENST00000493682 CORTO00230 105 aa12.6□□□□□ -0.39
COL9A1-210ENST00000493682 P0C879 139 aa12.6□□□□□ -0.39
COL9A1-210ENST00000493682 RNASE2P10153 161 aaKnown RBP12.6□□□□□ -0.39
COL9A1-210ENST00000493682 SPP1P10451 314 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms