RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 OR2B8PP59922 312 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 RAP1AP62834 184 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 C1orf146Q5VVC0 180 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 UBE2UQ5VVX9 321 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 TTC33Q6PID6 262 aaPredicted RBP2.22□□□□□ -2.05
UBR4-215ENST00000492606 C19orf35Q6ZS72 473 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 MS4A15Q8N5U1 240 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 ZNF555Q8NEP9 628 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 OR5A2Q8NGI9 324 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 PFN4Q8NHR9 129 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 PLPPR1Q8TBJ4 325 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 GHSRQ92847 366 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 C16orf74Q96GX8 76 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 Q96M85 177 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 PANX1Q96RD7 426 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 ZNF426Q9BUY5 554 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 SYT4Q9H2B2 425 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 ARMC7Q9H6L4 198 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 RPRD1BQ9NQG5 326 aaKnown RBP2.22□□□□□ -2.05
UBR4-215ENST00000492606 METTL1Q9UBP6 276 aaKnown RBP2.22□□□□□ -2.05
UBR4-215ENST00000492606 CYB5R1Q9UHQ9 305 aa2.22□□□□□ -2.05
UBR4-215ENST00000492606 IGHV3-49A0A0A0MS15 119 aa2.21□□□□□ -2.06
UBR4-215ENST00000492606 PLAC8L1A1L4L8 177 aa2.21□□□□□ -2.06
UBR4-215ENST00000492606 OR2T8A6NH00 312 aa2.21□□□□□ -2.06
UBR4-215ENST00000492606 H3BNG1 76 aa2.21□□□□□ -2.06
UBR4-215ENST00000492606 K7EP13 123 aa2.21□□□□□ -2.06
UBR4-215ENST00000492606 CHP2O43745 196 aa2.21□□□□□ -2.06
UBR4-215ENST00000492606 SNAPINO95295 136 aa2.21□□□□□ -2.06
UBR4-215ENST00000492606 CRABP2P29373 138 aa2.21□□□□□ -2.06
UBR4-215ENST00000492606 IL12AP29459 219 aa2.21□□□□□ -2.06
UBR4-215ENST00000492606 YAP1P46937 504 aaKnown RBP2.21□□□□□ -2.06
UBR4-215ENST00000492606 UBE2KP61086 200 aa2.21□□□□□ -2.06
UBR4-215ENST00000492606 GNMTQ14749 295 aa2.21□□□□□ -2.06
UBR4-215ENST00000492606 PSG5Q15238 335 aa2.21□□□□□ -2.06
UBR4-215ENST00000492606 MRPL23Q16540 153 aaKnown RBP2.21□□□□□ -2.06
UBR4-215ENST00000492606 LY6G6FQ5SQ64 297 aa2.21□□□□□ -2.06
UBR4-215ENST00000492606 LYPD5Q6UWN5 251 aa2.21□□□□□ -2.06
UBR4-215ENST00000492606 OR51S1Q8NGJ8 323 aa2.21□□□□□ -2.06
UBR4-215ENST00000492606 ACMSDQ8TDX5 336 aa2.21□□□□□ -2.06
UBR4-215ENST00000492606 MS4A6AQ9H2W1 248 aa2.21□□□□□ -2.06
UBR4-215ENST00000492606 RRAGDQ9NQL2 400 aaPredicted RBP2.21□□□□□ -2.06
UBR4-215ENST00000492606 SMPXQ9UHP9 88 aa2.21□□□□□ -2.06
UBR4-215ENST00000492606 IGHV3-74A0A0B4J1X5 117 aa2.2□□□□□ -2.06
UBR4-215ENST00000492606 IGKV1D-13A0A0B4J2D9 117 aa2.2□□□□□ -2.06
UBR4-215ENST00000492606 FUOMA2VDF0 154 aa2.2□□□□□ -2.06
UBR4-215ENST00000492606 IBA57-AS1B1ANH7 110 aa2.2□□□□□ -2.06
UBR4-215ENST00000492606 SMIM24O75264 130 aa2.2□□□□□ -2.06
UBR4-215ENST00000492606 CIB2O75838 187 aa2.2□□□□□ -2.06
UBR4-215ENST00000492606 HBE1P02100 147 aa2.2□□□□□ -2.06
UBR4-215ENST00000492606 GYPCP04921 128 aa2.2□□□□□ -2.06
UBR4-215ENST00000492606 IGKV1-13P0DP09 117 aa2.2□□□□□ -2.06
UBR4-215ENST00000492606 ZNF19P17023 458 aa2.2□□□□□ -2.06
UBR4-215ENST00000492606 LGALS3P17931 250 aaKnown RBP2.2□□□□□ -2.06
UBR4-215ENST00000492606 TBPP20226 339 aa2.2□□□□□ -2.06
UBR4-215ENST00000492606 CTRLP40313 264 aa2.2□□□□□ -2.06
UBR4-215ENST00000492606 MRPL28Q13084 256 aaKnown RBP2.2□□□□□ -2.06
UBR4-215ENST00000492606 RRN3P1Q2M238 152 aa2.2□□□□□ -2.06
UBR4-215ENST00000492606 CT45A1Q5HYN5 189 aa2.2□□□□□ -2.06
UBR4-215ENST00000492606 NATD1Q8N6N6 113 aa2.2□□□□□ -2.06
UBR4-215ENST00000492606 C14orf178Q8N769 122 aaPredicted RBP2.2□□□□□ -2.06
UBR4-215ENST00000492606 C8orf31Q8N9H6 132 aa2.2□□□□□ -2.06
UBR4-215ENST00000492606 FBXO36Q8NEA4 188 aa2.2□□□□□ -2.06
UBR4-215ENST00000492606 SPATA4Q8NEY3 305 aa2.2□□□□□ -2.06
UBR4-215ENST00000492606 CT45A3Q8NHU0 189 aa2.2□□□□□ -2.06
UBR4-215ENST00000492606 ZNF414Q96IQ9 312 aa2.2□□□□□ -2.06
UBR4-215ENST00000492606 OR2A7Q96R45 310 aa2.2□□□□□ -2.06
UBR4-215ENST00000492606 HIST1H4GQ99525 98 aa2.2□□□□□ -2.06
UBR4-215ENST00000492606 OR51M1Q9H341 326 aa2.2□□□□□ -2.06
UBR4-215ENST00000492606 ISG20L2Q9H9L3 353 aaKnown RBP2.2□□□□□ -2.06
UBR4-215ENST00000492606 BCL2L10Q9HD36 194 aa2.2□□□□□ -2.06
UBR4-215ENST00000492606 DAZ1Q9NQZ3 744 aaKnown RBP2.2□□□□□ -2.06
UBR4-215ENST00000492606 RABL2AQ9UBK7 228 aaPredicted RBP2.2□□□□□ -2.06
UBR4-215ENST00000492606 TMCO1Q9UM00 188 aa2.2□□□□□ -2.06
UBR4-215ENST00000492606 TMED5Q9Y3A6 229 aa2.2□□□□□ -2.06
UBR4-215ENST00000492606 MUC5ACP98088 5654 aa2.2□□□□□ -2.06
UBR4-215ENST00000492606 A0A087WUU8 490 aa2.19□□□□□ -2.06
UBR4-215ENST00000492606 SERTM2A0A1B0GWG4 89 aa2.19□□□□□ -2.06
UBR4-215ENST00000492606 PQLC2LA1A4F0 135 aa2.19□□□□□ -2.06
UBR4-215ENST00000492606 SMIM23A6NLE4 172 aa2.19□□□□□ -2.06
UBR4-215ENST00000492606 CPSF4LA6NMK7 179 aaKnown RBP2.19□□□□□ -2.06
UBR4-215ENST00000492606 SLC22A1O15245 554 aa2.19□□□□□ -2.06
UBR4-215ENST00000492606 PITX3O75364 302 aa2.19□□□□□ -2.06
UBR4-215ENST00000492606 OR2H2O95918 312 aa2.19□□□□□ -2.06
UBR4-215ENST00000492606 IL6P05231 212 aa2.19□□□□□ -2.06
UBR4-215ENST00000492606 PSMB6P28072 239 aa2.19□□□□□ -2.06
UBR4-215ENST00000492606 CX3CR1P49238 355 aa2.19□□□□□ -2.06
UBR4-215ENST00000492606 SERPINB9P50453 376 aa2.19□□□□□ -2.06
UBR4-215ENST00000492606 RGS8P57771 180 aaPredicted RBP2.19□□□□□ -2.06
UBR4-215ENST00000492606 NCALDP61601 193 aa2.19□□□□□ -2.06
UBR4-215ENST00000492606 DAZ2Q13117 558 aaKnown RBP2.19□□□□□ -2.06
UBR4-215ENST00000492606 SNCBQ16143 134 aa2.19□□□□□ -2.06
UBR4-215ENST00000492606 TEX30Q5JUR7 227 aa2.19□□□□□ -2.06
UBR4-215ENST00000492606 SAMD4BQ5PRF9 694 aaKnown RBP2.19□□□□□ -2.06
UBR4-215ENST00000492606 PLCXD3Q63HM9 321 aa2.19□□□□□ -2.06
UBR4-215ENST00000492606 ZNF546Q86UE3 836 aa2.19□□□□□ -2.06
UBR4-215ENST00000492606 LHFPL3Q86UP9 236 aa2.19□□□□□ -2.06
UBR4-215ENST00000492606 C10orf126Q8N4M7 172 aa2.19□□□□□ -2.06
UBR4-215ENST00000492606 C20orf203Q8NBC4 194 aa2.19□□□□□ -2.06
UBR4-215ENST00000492606 INO80EQ8NBZ0 244 aaPredicted RBP2.19□□□□□ -2.06
UBR4-215ENST00000492606 OR4C16Q8NGL9 310 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms