RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, human

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-222	ENST00000492423	OR10P1	Q8NGE3	313 aa		11.71	□□□□□ -0.53
COPS7B-222	ENST00000492423	STOML3	Q8TAV4	291 aa		11.71	□□□□□ -0.53
COPS7B-222	ENST00000492423	DUX5	Q96PT3	197 aa		11.71	□□□□□ -0.53
COPS7B-222	ENST00000492423	ESM1	Q9NQ30	184 aa		11.71	□□□□□ -0.53
COPS7B-222	ENST00000492423	TLN2	Q9Y4G6	2542 aa		11.7	□□□□□ -0.54
COPS7B-222	ENST00000492423	INAFM1	C9JVW0	142 aa		11.7	□□□□□ -0.54
COPS7B-222	ENST00000492423	CFD	P00746	253 aa	Predicted RBP	11.7	□□□□□ -0.54
COPS7B-222	ENST00000492423	IFNA4	P05014	189 aa		11.7	□□□□□ -0.54
COPS7B-222	ENST00000492423	SUB1	P53999	127 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
COPS7B-222	ENST00000492423	UBA52	P62987	128 aa	Known RBP	11.7	□□□□□ -0.54
COPS7B-222	ENST00000492423	SCGB2A2	Q13296	93 aa		11.7	□□□□□ -0.54
COPS7B-222	ENST00000492423	ATP6V1F	Q16864	119 aa		11.7	□□□□□ -0.54
COPS7B-222	ENST00000492423	ECSCR	Q19T08	205 aa		11.7	□□□□□ -0.54
COPS7B-222	ENST00000492423	UNQ5815/PRO19632	Q6UWF5	114 aa		11.7	□□□□□ -0.54
COPS7B-222	ENST00000492423	SLC35E3	Q7Z769	313 aa		11.7	□□□□□ -0.54
COPS7B-222	ENST00000492423	LILRB2	Q8N423	598 aa		11.7	□□□□□ -0.54
COPS7B-222	ENST00000492423	OR1P1	Q8NH06	330 aa		11.7	□□□□□ -0.54
COPS7B-222	ENST00000492423	FAM110D	Q8TAY7	271 aa	Predicted RBP	11.7	□□□□□ -0.54
COPS7B-222	ENST00000492423	ST8SIA2	Q92186	375 aa		11.7	□□□□□ -0.54
COPS7B-222	ENST00000492423	PINX1	Q96BK5	328 aa	Known RBP	11.7	□□□□□ -0.54
COPS7B-222	ENST00000492423	TMEM147	Q9BVK8	224 aa		11.7	□□□□□ -0.54
COPS7B-222	ENST00000492423	GON7	Q9BXV9	100 aa		11.7	□□□□□ -0.54
COPS7B-222	ENST00000492423	WNT10A	Q9GZT5	417 aa		11.7	□□□□□ -0.54
COPS7B-222	ENST00000492423	ARV1	Q9H2C2	271 aa		11.7	□□□□□ -0.54
COPS7B-222	ENST00000492423	SON	P18583	2426 aa	Known RBP	11.69	□□□□□ -0.54
COPS7B-222	ENST00000492423		G3V318	75 aa		11.69	□□□□□ -0.54
COPS7B-222	ENST00000492423	DFFB	O76075	338 aa		11.69	□□□□□ -0.54
COPS7B-222	ENST00000492423	CD69	Q07108	199 aa		11.69	□□□□□ -0.54
COPS7B-222	ENST00000492423	ARSJ	Q5FYB0	599 aa	Predicted RBP	11.69	□□□□□ -0.54
COPS7B-222	ENST00000492423	RBMS3	Q6XE24	437 aa	Known RBP	11.69	□□□□□ -0.54
COPS7B-222	ENST00000492423	UBAC2	Q8NBM4	344 aa		11.69	□□□□□ -0.54
COPS7B-222	ENST00000492423	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.69	□□□□□ -0.54
COPS7B-222	ENST00000492423	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.69	□□□□□ -0.54
COPS7B-222	ENST00000492423	ZNF702P	Q9H963	129 aa		11.69	□□□□□ -0.54
COPS7B-222	ENST00000492423	ANK3	Q12955	4377 aa	Known RBP	11.68	□□□□□ -0.54
COPS7B-222	ENST00000492423	UBE2L5P	A0A1B0GUS4	154 aa		11.68	□□□□□ -0.54
COPS7B-222	ENST00000492423	IGF1	P05019	195 aa		11.68	□□□□□ -0.54
COPS7B-222	ENST00000492423	MDK	P21741	143 aa	Predicted RBP	11.68	□□□□□ -0.54
COPS7B-222	ENST00000492423	ZNF266	Q14584	549 aa		11.68	□□□□□ -0.54
COPS7B-222	ENST00000492423	KLK9	Q2XQG4	91 aa		11.68	□□□□□ -0.54
COPS7B-222	ENST00000492423	TMEM95	Q3KNT9	176 aa		11.68	□□□□□ -0.54
COPS7B-222	ENST00000492423	AKIRIN2	Q53H80	203 aa		11.68	□□□□□ -0.54
COPS7B-222	ENST00000492423	SLC16A13	Q7RTY0	426 aa		11.68	□□□□□ -0.54
COPS7B-222	ENST00000492423	TMEM68	Q96MH6	324 aa		11.68	□□□□□ -0.54
COPS7B-222	ENST00000492423	FANCD2OS	Q96PS1	177 aa		11.68	□□□□□ -0.54
COPS7B-222	ENST00000492423	GGACT	Q9BVM4	153 aa		11.68	□□□□□ -0.54
COPS7B-222	ENST00000492423	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.68	□□□□□ -0.54
COPS7B-222	ENST00000492423	SLA2	Q9H6Q3	261 aa		11.68	□□□□□ -0.54
COPS7B-222	ENST00000492423	UQCC1	Q9NVA1	299 aa		11.68	□□□□□ -0.54
COPS7B-222	ENST00000492423	LINC00527	Q9UJ94	153 aa		11.68	□□□□□ -0.54
COPS7B-222	ENST00000492423	ZNF580	Q9UK33	172 aa		11.68	□□□□□ -0.54
COPS7B-222	ENST00000492423	KLK9	Q9UKQ9	250 aa		11.68	□□□□□ -0.54
COPS7B-222	ENST00000492423	IGLV11-55	A0A075B6I3	123 aa		11.67	□□□□□ -0.54
COPS7B-222	ENST00000492423	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.67	□□□□□ -0.54
COPS7B-222	ENST00000492423	TRAV41	A0A0B4J266	112 aa		11.67	□□□□□ -0.54
COPS7B-222	ENST00000492423	FNDC10	F2Z333	226 aa		11.67	□□□□□ -0.54
COPS7B-222	ENST00000492423	CLDN34	H7C241	214 aa		11.67	□□□□□ -0.54
COPS7B-222	ENST00000492423	SOX15	O60248	233 aa		11.67	□□□□□ -0.54
COPS7B-222	ENST00000492423	JTB	O76095	146 aa		11.67	□□□□□ -0.54
COPS7B-222	ENST00000492423	PRH1	P02810	166 aa		11.67	□□□□□ -0.54
COPS7B-222	ENST00000492423	TPT1	P13693	172 aa	Known RBP	11.67	□□□□□ -0.54
COPS7B-222	ENST00000492423	MLANA	Q16655	118 aa		11.67	□□□□□ -0.54
COPS7B-222	ENST00000492423	SLC25A24	Q6NUK1	477 aa		11.67	□□□□□ -0.54
COPS7B-222	ENST00000492423	OR5T1	Q8NG75	326 aa		11.67	□□□□□ -0.54
COPS7B-222	ENST00000492423	MISP3	Q96FF7	219 aa		11.67	□□□□□ -0.54
COPS7B-222	ENST00000492423	GINS3	Q9BRX5	216 aa		11.67	□□□□□ -0.54
COPS7B-222	ENST00000492423	NPFFR1	Q9GZQ6	430 aa		11.67	□□□□□ -0.54
COPS7B-222	ENST00000492423		I3L2K1	104 aa		11.66	□□□□□ -0.54
COPS7B-222	ENST00000492423	AP4M1	O00189	453 aa		11.66	□□□□□ -0.54
COPS7B-222	ENST00000492423	CORT	O00230	105 aa		11.66	□□□□□ -0.54
COPS7B-222	ENST00000492423	LOR	P23490	312 aa	Predicted RBP	11.66	□□□□□ -0.54
COPS7B-222	ENST00000492423	GPX4	P36969	197 aa	Predicted RBP	11.66	□□□□□ -0.54
COPS7B-222	ENST00000492423	HILS1	P60008	231 aa		11.66	□□□□□ -0.54
COPS7B-222	ENST00000492423	RUNX1	Q01196	453 aa		11.66	□□□□□ -0.54
COPS7B-222	ENST00000492423	CFHR3	Q02985	330 aa		11.66	□□□□□ -0.54
COPS7B-222	ENST00000492423	BAP18	Q8IXM2	172 aa		11.66	□□□□□ -0.54
COPS7B-222	ENST00000492423		Q8N2B8	174 aa		11.66	□□□□□ -0.54
COPS7B-222	ENST00000492423	HSD17B11	Q8NBQ5	300 aa		11.66	□□□□□ -0.54
COPS7B-222	ENST00000492423	OR1L6	Q8NGR2	347 aa		11.66	□□□□□ -0.54
COPS7B-222	ENST00000492423	ZNF418	Q8TF45	676 aa	Predicted RBP	11.66	□□□□□ -0.54
COPS7B-222	ENST00000492423	NOL4L	Q96MY1	436 aa	Predicted RBP	11.66	□□□□□ -0.54
COPS7B-222	ENST00000492423	PRSS22	Q9GZN4	317 aa		11.66	□□□□□ -0.54
COPS7B-222	ENST00000492423	WDR61	Q9GZS3	305 aa	Known RBP	11.66	□□□□□ -0.54
COPS7B-222	ENST00000492423	MRPL36	Q9P0J6	103 aa	Known RBP	11.66	□□□□□ -0.54
COPS7B-222	ENST00000492423	WDR83OS	Q9Y284	106 aa		11.66	□□□□□ -0.54
COPS7B-222	ENST00000492423	MAP1A	P78559	2803 aa	Predicted RBP	11.66	□□□□□ -0.54
COPS7B-222	ENST00000492423	TRIM77	I1YAP6	450 aa		11.65	□□□□□ -0.54
COPS7B-222	ENST00000492423		K7EIM0	57 aa		11.65	□□□□□ -0.54
COPS7B-222	ENST00000492423	IFNA5	P01569	189 aa		11.65	□□□□□ -0.54
COPS7B-222	ENST00000492423	DEFA4	P12838	97 aa		11.65	□□□□□ -0.54
COPS7B-222	ENST00000492423	ATP6V0C	P27449	155 aa		11.65	□□□□□ -0.54
COPS7B-222	ENST00000492423	PPIF	P30405	207 aa	Known RBP	11.65	□□□□□ -0.54
COPS7B-222	ENST00000492423	OPRK1	P41145	380 aa		11.65	□□□□□ -0.54
COPS7B-222	ENST00000492423	EIF5A	P63241	154 aa	Known RBP	11.65	□□□□□ -0.54
COPS7B-222	ENST00000492423	EXOSC2	Q13868	293 aa	Known RBP	11.65	□□□□□ -0.54
COPS7B-222	ENST00000492423	TEX261	Q6UWH6	196 aa		11.65	□□□□□ -0.54
COPS7B-222	ENST00000492423	CACNG8	Q8WXS5	425 aa		11.65	□□□□□ -0.54
COPS7B-222	ENST00000492423	RFNG	Q9Y644	331 aa		11.65	□□□□□ -0.54
COPS7B-222	ENST00000492423	HIVEP2	P31629	2446 aa		11.64	□□□□□ -0.55
COPS7B-222	ENST00000492423	TRBV9	A0A0B4J1U6	114 aa		11.64	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms