RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 RAB31Q13636 194 aa7.62□□□□□ -1.19
USP54-214ENST00000492357 C10orf55Q5SWW7 151 aa7.62□□□□□ -1.19
USP54-214ENST00000492357 CENPVQ7Z7K6 275 aaPredicted RBP7.62□□□□□ -1.19
USP54-214ENST00000492357 COMMD1Q8N668 190 aa7.62□□□□□ -1.19
USP54-214ENST00000492357 SIGLECL1Q8N7X8 197 aa7.62□□□□□ -1.19
USP54-214ENST00000492357 OR10W1Q8NGF6 305 aa7.62□□□□□ -1.19
USP54-214ENST00000492357 TMEM170AQ8WVE7 144 aa7.62□□□□□ -1.19
USP54-214ENST00000492357 TXN2Q99757 166 aa7.62□□□□□ -1.19
USP54-214ENST00000492357 ZNF471Q9BX82 626 aaPredicted RBP7.62□□□□□ -1.19
USP54-214ENST00000492357 CYTL1Q9NRR1 136 aa7.62□□□□□ -1.19
USP54-214ENST00000492357 HIVEP2P31629 2446 aa7.62□□□□□ -1.19
USP54-214ENST00000492357 IGLV11-55A0A075B6I3 123 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 TRAV41A0A0B4J266 112 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 UMAD1C9J7I0 102 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 C17orf112F2Z3M2 114 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 ATP6V0E1O15342 81 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 EGR2P11161 476 aaPredicted RBP7.61□□□□□ -1.19
USP54-214ENST00000492357 DEFA4P12838 97 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 MDKP21741 143 aaPredicted RBP7.61□□□□□ -1.19
USP54-214ENST00000492357 RAB5CP51148 216 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 SELENOTP62341 195 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 NDPQ00604 133 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 LY6EQ16553 131 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 FBLN7Q53RD9 439 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 OR8G2PQ6IF36 304 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 TEX261Q6UWH6 196 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 TMEM144Q7Z5S9 345 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 HAPLN4Q86UW8 402 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 TMEM219Q86XT9 240 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 NECAP1Q8NC96 275 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 TMEM116Q8NCL8 245 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 LFNGQ8NES3 379 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 SCGB1C1Q8TD33 95 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 VN1R17PQ8TDU5 208 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 ST8SIA2Q92186 375 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 SLC35E1Q96K37 410 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 HSPB9Q9BQS6 159 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 GINS3Q9BRX5 216 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 WNT10AQ9GZT5 417 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 PARP11Q9NR21 331 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 WDR83OSQ9Y284 106 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 FBXO7Q9Y3I1 522 aa7.61□□□□□ -1.19
USP54-214ENST00000492357 TRAV30A0A087WSZ9 112 aa7.6□□□□□ -1.19
USP54-214ENST00000492357 TRBV9A0A0B4J1U6 114 aa7.6□□□□□ -1.19
USP54-214ENST00000492357 MDFIC2A0A1B0GVS7 189 aa7.6□□□□□ -1.19
USP54-214ENST00000492357 FAM223BA6NKX1 122 aa7.6□□□□□ -1.19
USP54-214ENST00000492357 CRLF1O75462 422 aa7.6□□□□□ -1.19
USP54-214ENST00000492357 CFDP00746 253 aaPredicted RBP7.6□□□□□ -1.19
USP54-214ENST00000492357 OPN1MWP04001 364 aa7.6□□□□□ -1.19
USP54-214ENST00000492357 FABP1P07148 127 aa7.6□□□□□ -1.19
USP54-214ENST00000492357 OPN1MW2P0DN77 364 aa7.6□□□□□ -1.19
USP54-214ENST00000492357 OPN1MW3P0DN78 364 aa7.6□□□□□ -1.19
USP54-214ENST00000492357 MYOD1P15172 320 aa7.6□□□□□ -1.19
USP54-214ENST00000492357 AREGP15514 252 aa7.6□□□□□ -1.19
USP54-214ENST00000492357 SLC35B1P78383 322 aa7.6□□□□□ -1.19
USP54-214ENST00000492357 SPINK9Q5DT21 86 aa7.6□□□□□ -1.19
USP54-214ENST00000492357 ASPHD1Q5U4P2 390 aa7.6□□□□□ -1.19
USP54-214ENST00000492357 TEPPQ6URK8 271 aa7.6□□□□□ -1.19
USP54-214ENST00000492357 UNQ5815/PRO19632Q6UWF5 114 aa7.6□□□□□ -1.19
USP54-214ENST00000492357 DPPA3Q6W0C5 159 aa7.6□□□□□ -1.19
USP54-214ENST00000492357 FAM223AQ8IWN6 122 aa7.6□□□□□ -1.19
USP54-214ENST00000492357 TMEM217Q8N7C4 229 aa7.6□□□□□ -1.19
USP54-214ENST00000492357 OR2G3Q8NGZ4 309 aa7.6□□□□□ -1.19
USP54-214ENST00000492357 SCARB1Q8WTV0 552 aa7.6□□□□□ -1.19
USP54-214ENST00000492357 WFDC12Q8WWY7 111 aa7.6□□□□□ -1.19
USP54-214ENST00000492357 USMG5Q96IX5 58 aa7.6□□□□□ -1.19
USP54-214ENST00000492357 CXorf58Q96LI9 332 aa7.6□□□□□ -1.19
USP54-214ENST00000492357 WDR61Q9GZS3 305 aaKnown RBP7.6□□□□□ -1.19
USP54-214ENST00000492357 LSM4Q9Y4Z0 139 aaKnown RBP7.6□□□□□ -1.19
USP54-214ENST00000492357 A0A0G2JLM5 398 aa7.59□□□□□ -1.19
USP54-214ENST00000492357 DNAJC9-AS1A6NH13 148 aa7.59□□□□□ -1.19
USP54-214ENST00000492357 MBP02144 154 aa7.59□□□□□ -1.19
USP54-214ENST00000492357 SPP1P10451 314 aa7.59□□□□□ -1.19
USP54-214ENST00000492357 PPIFP30405 207 aaKnown RBP7.59□□□□□ -1.19
USP54-214ENST00000492357 OPRK1P41145 380 aa7.59□□□□□ -1.19
USP54-214ENST00000492357 NPBWR1P48145 328 aa7.59□□□□□ -1.19
USP54-214ENST00000492357 PRR20EP86478 221 aa7.59□□□□□ -1.19
USP54-214ENST00000492357 PRR20CP86479 221 aa7.59□□□□□ -1.19
USP54-214ENST00000492357 PRR20DP86480 221 aa7.59□□□□□ -1.19
USP54-214ENST00000492357 PRR20BP86481 221 aa7.59□□□□□ -1.19
USP54-214ENST00000492357 PRR20AP86496 221 aa7.59□□□□□ -1.19
USP54-214ENST00000492357 IFITM2Q01629 132 aa7.59□□□□□ -1.19
USP54-214ENST00000492357 ARL16Q0P5N6 197 aa7.59□□□□□ -1.19
USP54-214ENST00000492357 PXDC1Q5TGL8 231 aa7.59□□□□□ -1.19
USP54-214ENST00000492357 RPL7L1Q6DKI1 246 aaKnown RBP7.59□□□□□ -1.19
USP54-214ENST00000492357 SLC25A24Q6NUK1 477 aa7.59□□□□□ -1.19
USP54-214ENST00000492357 TREML4Q6UXN2 200 aa7.59□□□□□ -1.19
USP54-214ENST00000492357 SLC16A13Q7RTY0 426 aa7.59□□□□□ -1.19
USP54-214ENST00000492357 ZNF709Q8N972 641 aa7.59□□□□□ -1.19
USP54-214ENST00000492357 THAP8Q8NA92 274 aa7.59□□□□□ -1.19
USP54-214ENST00000492357 OR4X1Q8NH49 305 aa7.59□□□□□ -1.19
USP54-214ENST00000492357 TAF15Q92804 592 aaKnown RBP eCLIP7.59□□□□□ -1.19
USP54-214ENST00000492357 C19orf24Q9BVV8 132 aa7.59□□□□□ -1.19
USP54-214ENST00000492357 C16orf95Q9H693 158 aa7.59□□□□□ -1.19
USP54-214ENST00000492357 PAIP2BQ9ULR5 123 aaKnown RBP7.59□□□□□ -1.19
USP54-214ENST00000492357 SOX21Q9Y651 276 aaPredicted RBP7.59□□□□□ -1.19
USP54-214ENST00000492357 TLN2Q9Y4G6 2542 aa7.59□□□□□ -1.19
USP54-214ENST00000492357 ACANP16112 2415 aa7.58□□□□□ -1.2
USP54-214ENST00000492357 I3L2K1 104 aa7.58□□□□□ -1.2
USP54-214ENST00000492357 NDUFA7O95182 113 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms