RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-223	ENST00000491295	RND3	P61587	244 aa		13.22	□□□□□ -0.29
GGA1-223	ENST00000491295	EWSR1	Q01844	656 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
GGA1-223	ENST00000491295	DUSP18	Q8NEJ0	188 aa		13.22	□□□□□ -0.29
GGA1-223	ENST00000491295	MRGPRF	Q96AM1	343 aa		13.22	□□□□□ -0.29
GGA1-223	ENST00000491295	ZNF414	Q96IQ9	312 aa		13.22	□□□□□ -0.29
GGA1-223	ENST00000491295	SNCA	P37840	140 aa		13.21	□□□□□ -0.29
GGA1-223	ENST00000491295	SNX29P2	Q8IUI4	249 aa		13.21	□□□□□ -0.29
GGA1-223	ENST00000491295	APRG1	Q8IVJ8	170 aa		13.21	□□□□□ -0.29
GGA1-223	ENST00000491295	HYDIN	Q4G0P3	5121 aa		13.21	□□□□□ -0.3
GGA1-223	ENST00000491295	TRAV2	A0A0B4J234	112 aa		13.2	□□□□□ -0.3
GGA1-223	ENST00000491295	CORT	O00230	105 aa		13.2	□□□□□ -0.3
GGA1-223	ENST00000491295	DFFB	O76075	338 aa		13.2	□□□□□ -0.3
GGA1-223	ENST00000491295	SUB1	P53999	127 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
GGA1-223	ENST00000491295	PINX1	Q96BK5	328 aa	Known RBP	13.2	□□□□□ -0.3
GGA1-223	ENST00000491295	TMEM231	Q9H6L2	316 aa		13.2	□□□□□ -0.3
GGA1-223	ENST00000491295	VSIR	Q9H7M9	311 aa		13.2	□□□□□ -0.3
GGA1-223	ENST00000491295	BIRC6	Q9NR09	4857 aa		13.2	□□□□□ -0.3
GGA1-223	ENST00000491295	ELK1	P19419	428 aa		13.19	□□□□□ -0.3
GGA1-223	ENST00000491295	TBP	P20226	339 aa		13.19	□□□□□ -0.3
GGA1-223	ENST00000491295	RORC	P51449	518 aa		13.19	□□□□□ -0.3
GGA1-223	ENST00000491295	PVRIG	Q6DKI7	326 aa		13.19	□□□□□ -0.3
GGA1-223	ENST00000491295	MZT2A	Q6P582	158 aa		13.19	□□□□□ -0.3
GGA1-223	ENST00000491295	TOMM20L	Q6UXN7	152 aa		13.19	□□□□□ -0.3
GGA1-223	ENST00000491295	ZNF600	Q6ZNG1	722 aa		13.19	□□□□□ -0.3
GGA1-223	ENST00000491295	TCF24	Q7RTU0	167 aa		13.19	□□□□□ -0.3
GGA1-223	ENST00000491295	ARRDC1	Q8N5I2	433 aa		13.19	□□□□□ -0.3
GGA1-223	ENST00000491295	PHLDA1	Q8WV24	401 aa	Predicted RBP	13.19	□□□□□ -0.3
GGA1-223	ENST00000491295	RARRES2	Q99969	163 aa		13.19	□□□□□ -0.3
GGA1-223	ENST00000491295	FUNDC2	Q9BWH2	189 aa		13.19	□□□□□ -0.3
GGA1-223	ENST00000491295	MFF	Q9GZY8	342 aa		13.19	□□□□□ -0.3
GGA1-223	ENST00000491295	ALMS1	Q8TCU4	4167 aa		13.18	□□□□□ -0.3
GGA1-223	ENST00000491295	TFPI2	P48307	235 aa		13.18	□□□□□ -0.3
GGA1-223	ENST00000491295	NCS1	P62166	190 aa		13.18	□□□□□ -0.3
GGA1-223	ENST00000491295	RNASE10	Q5GAN6	216 aa	Known RBP	13.18	□□□□□ -0.3
GGA1-223	ENST00000491295	LHFPL1	Q86WI0	220 aa		13.18	□□□□□ -0.3
GGA1-223	ENST00000491295	C15orf40	Q8WUR7	153 aa		13.18	□□□□□ -0.3
GGA1-223	ENST00000491295	AP3S1	Q92572	193 aa		13.18	□□□□□ -0.3
GGA1-223	ENST00000491295	PDCD10	Q9BUL8	212 aa		13.18	□□□□□ -0.3
GGA1-223	ENST00000491295	IGHV3-49	A0A0A0MS15	119 aa		13.17	□□□□□ -0.3
GGA1-223	ENST00000491295		A0A1W2PS18	150 aa		13.17	□□□□□ -0.3
GGA1-223	ENST00000491295	DNASE2	O00115	360 aa	Predicted RBP	13.17	□□□□□ -0.3
GGA1-223	ENST00000491295	ST8SIA3	O43173	380 aa		13.17	□□□□□ -0.3
GGA1-223	ENST00000491295	HPGDS	O60760	199 aa		13.17	□□□□□ -0.3
GGA1-223	ENST00000491295	SCGB2A1	O75556	95 aa		13.17	□□□□□ -0.3
GGA1-223	ENST00000491295	B3GALNT1	O75752	331 aa		13.17	□□□□□ -0.3
GGA1-223	ENST00000491295	TMEM50A	O95807	157 aa		13.17	□□□□□ -0.3
GGA1-223	ENST00000491295	IFNA17	P01571	189 aa		13.17	□□□□□ -0.3
GGA1-223	ENST00000491295	IGHV3-48	P01763	117 aa		13.17	□□□□□ -0.3
GGA1-223	ENST00000491295	PGAM2	P15259	253 aa		13.17	□□□□□ -0.3
GGA1-223	ENST00000491295	PIGP	P57054	158 aa		13.17	□□□□□ -0.3
GGA1-223	ENST00000491295	PLEC	Q15149	4684 aa	Known RBP	13.17	□□□□□ -0.3
GGA1-223	ENST00000491295	GBGT1	Q8N5D6	347 aa		13.17	□□□□□ -0.3
GGA1-223	ENST00000491295	SLC35G3	Q8N808	338 aa		13.17	□□□□□ -0.3
GGA1-223	ENST00000491295	ZFAND1	Q8TCF1	268 aa		13.17	□□□□□ -0.3
GGA1-223	ENST00000491295	C11orf68	Q9H3H3	251 aa	Known RBP	13.17	□□□□□ -0.3
GGA1-223	ENST00000491295	IGKV3-7	A0A075B6H7	116 aa		13.16	□□□□□ -0.3
GGA1-223	ENST00000491295		A0A0B4J293	547 aa		13.16	□□□□□ -0.3
GGA1-223	ENST00000491295	C3orf85	A0A1B0GTC6	90 aa		13.16	□□□□□ -0.3
GGA1-223	ENST00000491295		M0QYG6	137 aa		13.16	□□□□□ -0.3
GGA1-223	ENST00000491295	IGKV1-5	P01602	117 aa		13.16	□□□□□ -0.3
GGA1-223	ENST00000491295		P0C879	139 aa		13.16	□□□□□ -0.3
GGA1-223	ENST00000491295	RPL5	P46777	297 aa	Known RBP	13.16	□□□□□ -0.3
GGA1-223	ENST00000491295	AKR1C2	P52895	323 aa		13.16	□□□□□ -0.3
GGA1-223	ENST00000491295	VBP1	P61758	197 aa		13.16	□□□□□ -0.3
GGA1-223	ENST00000491295	LGALS9C	Q6DKI2	356 aa		13.16	□□□□□ -0.3
GGA1-223	ENST00000491295	OR11H2	Q8NH07	326 aa		13.16	□□□□□ -0.3
GGA1-223	ENST00000491295	MS4A6A	Q9H2W1	248 aa		13.16	□□□□□ -0.3
GGA1-223	ENST00000491295	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.16	□□□□□ -0.3
GGA1-223	ENST00000491295	IGHV3OR16-13	A0A075B7E8	117 aa		13.15	□□□□□ -0.3
GGA1-223	ENST00000491295	IGHV3-74	A0A0B4J1X5	117 aa		13.15	□□□□□ -0.3
GGA1-223	ENST00000491295	FAM25A	B3EWG3	89 aa		13.15	□□□□□ -0.3
GGA1-223	ENST00000491295	FAM25C	B3EWG5	89 aa		13.15	□□□□□ -0.3
GGA1-223	ENST00000491295	FAM25G	B3EWG6	89 aa		13.15	□□□□□ -0.3
GGA1-223	ENST00000491295	IFNA4	P05014	189 aa		13.15	□□□□□ -0.3
GGA1-223	ENST00000491295	NPPC	P23582	126 aa		13.15	□□□□□ -0.3
GGA1-223	ENST00000491295	TCTA	P57738	103 aa		13.15	□□□□□ -0.3
GGA1-223	ENST00000491295	ZNF124	Q15973	351 aa		13.15	□□□□□ -0.3
GGA1-223	ENST00000491295	CCDC71L	Q8N9Z2	235 aa		13.15	□□□□□ -0.3
GGA1-223	ENST00000491295	C11orf45	Q8TAV5	145 aa		13.15	□□□□□ -0.3
GGA1-223	ENST00000491295	ST8SIA2	Q92186	375 aa		13.15	□□□□□ -0.3
GGA1-223	ENST00000491295	RRNAD1	Q96FB5	475 aa	Known RBP	13.15	□□□□□ -0.3
GGA1-223	ENST00000491295	TP53RK	Q96S44	253 aa		13.15	□□□□□ -0.3
GGA1-223	ENST00000491295	ZFAND3	Q9H8U3	227 aa		13.15	□□□□□ -0.3
GGA1-223	ENST00000491295	ENY2	Q9NPA8	101 aa		13.15	□□□□□ -0.3
GGA1-223	ENST00000491295	KLK11	Q9UBX7	282 aa		13.15	□□□□□ -0.3
GGA1-223	ENST00000491295	MTFP1	Q9UDX5	166 aa		13.15	□□□□□ -0.3
GGA1-223	ENST00000491295	RPL11	P62913	178 aa	Known RBP	13.14	□□□□□ -0.31
GGA1-223	ENST00000491295	TMEM187	Q14656	261 aa		13.14	□□□□□ -0.31
GGA1-223	ENST00000491295	IZUMO4	Q1ZYL8	232 aa		13.14	□□□□□ -0.31
GGA1-223	ENST00000491295	TMEM41B	Q5BJD5	291 aa		13.14	□□□□□ -0.31
GGA1-223	ENST00000491295	TERB2	Q8NHR7	220 aa		13.14	□□□□□ -0.31
GGA1-223	ENST00000491295	COPZ2	Q9P299	210 aa		13.14	□□□□□ -0.31
GGA1-223	ENST00000491295	TRAV30	A0A087WSZ9	112 aa		13.13	□□□□□ -0.31
GGA1-223	ENST00000491295	CLN5	O75503	358 aa		13.13	□□□□□ -0.31
GGA1-223	ENST00000491295	CA1	P00915	261 aa	Predicted RBP	13.13	□□□□□ -0.31
GGA1-223	ENST00000491295	APOH	P02749	345 aa	Predicted RBP	13.13	□□□□□ -0.31
GGA1-223	ENST00000491295	CD3D	P04234	171 aa		13.13	□□□□□ -0.31
GGA1-223	ENST00000491295	RNASE2	P10153	161 aa	Known RBP	13.13	□□□□□ -0.31
GGA1-223	ENST00000491295	ZNF182	P17025	639 aa	Predicted RBP	13.13	□□□□□ -0.31
GGA1-223	ENST00000491295	PI3	P19957	117 aa		13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms