RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 ATP5G2Q06055 141 aa8.34□□□□□ -1.07
CACNA1C-227ENST00000491104 EXOSC2Q13868 293 aaKnown RBP8.34□□□□□ -1.07
CACNA1C-227ENST00000491104 MLANAQ16655 118 aa8.34□□□□□ -1.07
CACNA1C-227ENST00000491104 KLK9Q2XQG4 91 aa8.34□□□□□ -1.07
CACNA1C-227ENST00000491104 C15orf32Q32M92 178 aa8.34□□□□□ -1.07
CACNA1C-227ENST00000491104 C2orf83Q53S99 150 aa8.34□□□□□ -1.07
CACNA1C-227ENST00000491104 SPANXN5Q5MJ07 72 aa8.34□□□□□ -1.07
CACNA1C-227ENST00000491104 SHISA2Q6UWI4 295 aa8.34□□□□□ -1.07
CACNA1C-227ENST00000491104 PSENENQ9NZ42 101 aa8.34□□□□□ -1.07
CACNA1C-227ENST00000491104 CACFD1Q9UGQ2 172 aa8.34□□□□□ -1.07
CACNA1C-227ENST00000491104 KLK9Q9UKQ9 250 aa8.34□□□□□ -1.07
CACNA1C-227ENST00000491104 ATRQ13535 2644 aa8.33□□□□□ -1.08
CACNA1C-227ENST00000491104 ANKRD34BA5PLL1 514 aa8.33□□□□□ -1.08
CACNA1C-227ENST00000491104 FAM223BA6NKX1 122 aa8.33□□□□□ -1.08
CACNA1C-227ENST00000491104 H0YIZ8 118 aa8.33□□□□□ -1.08
CACNA1C-227ENST00000491104 K7EIM0 57 aa8.33□□□□□ -1.08
CACNA1C-227ENST00000491104 L7N2F9 121 aa8.33□□□□□ -1.08
CACNA1C-227ENST00000491104 BRI3O95415 125 aa8.33□□□□□ -1.08
CACNA1C-227ENST00000491104 MT-CO2P00403 227 aa8.33□□□□□ -1.08
CACNA1C-227ENST00000491104 TRBV12-3P01733 135 aa8.33□□□□□ -1.08
CACNA1C-227ENST00000491104 CDX1P47902 265 aaPredicted RBP8.33□□□□□ -1.08
CACNA1C-227ENST00000491104 SUB1P53999 127 aaKnown RBP eCLIP8.33□□□□□ -1.08
CACNA1C-227ENST00000491104 VAMP2P63027 116 aa8.33□□□□□ -1.08
CACNA1C-227ENST00000491104 NDUFA11Q86Y39 141 aa8.33□□□□□ -1.08
CACNA1C-227ENST00000491104 FAM223AQ8IWN6 122 aa8.33□□□□□ -1.08
CACNA1C-227ENST00000491104 NECAP1Q8NC96 275 aa8.33□□□□□ -1.08
CACNA1C-227ENST00000491104 CHAC2Q8WUX2 184 aa8.33□□□□□ -1.08
CACNA1C-227ENST00000491104 PPP1R1CQ8WVI7 109 aa8.33□□□□□ -1.08
CACNA1C-227ENST00000491104 UBE2E2Q96LR5 201 aa8.33□□□□□ -1.08
CACNA1C-227ENST00000491104 CCDC140Q96MF4 163 aa8.33□□□□□ -1.08
CACNA1C-227ENST00000491104 CIB3Q96Q77 187 aaPredicted RBP8.33□□□□□ -1.08
CACNA1C-227ENST00000491104 ZNF436Q9C0F3 470 aaPredicted RBP8.33□□□□□ -1.08
CACNA1C-227ENST00000491104 C11orf1Q9H5F2 150 aa8.33□□□□□ -1.08
CACNA1C-227ENST00000491104 FNDC4Q9H6D8 234 aaPredicted RBP8.33□□□□□ -1.08
CACNA1C-227ENST00000491104 ZFP57Q9NU63 452 aa8.33□□□□□ -1.08
CACNA1C-227ENST00000491104 OR5AC2Q9NZP5 309 aa8.33□□□□□ -1.08
CACNA1C-227ENST00000491104 MRPL36Q9P0J6 103 aaKnown RBP8.33□□□□□ -1.08
CACNA1C-227ENST00000491104 U3KQ87 197 aa8.33□□□□□ -1.08
CACNA1C-227ENST00000491104 IGHV4OR15-8A0A075B7B6 117 aa8.32□□□□□ -1.08
CACNA1C-227ENST00000491104 A0A087WW49 117 aa8.32□□□□□ -1.08
CACNA1C-227ENST00000491104 FAM24AA6NFZ4 105 aa8.32□□□□□ -1.08
CACNA1C-227ENST00000491104 I3L2K1 104 aa8.32□□□□□ -1.08
CACNA1C-227ENST00000491104 I3L521 148 aa8.32□□□□□ -1.08
CACNA1C-227ENST00000491104 TSPAN15O95858 294 aa8.32□□□□□ -1.08
CACNA1C-227ENST00000491104 LGALS1P09382 135 aaKnown RBP8.32□□□□□ -1.08
CACNA1C-227ENST00000491104 OR8U8P0C7N1 319 aa8.32□□□□□ -1.08
CACNA1C-227ENST00000491104 BCAP31P51572 246 aa8.32□□□□□ -1.08
CACNA1C-227ENST00000491104 PVRIGQ6DKI7 326 aa8.32□□□□□ -1.08
CACNA1C-227ENST00000491104 CLEC19AQ6UXS0 136 aa8.32□□□□□ -1.08
CACNA1C-227ENST00000491104 OR1L6Q8NGR2 347 aa8.32□□□□□ -1.08
CACNA1C-227ENST00000491104 SCARB1Q8WTV0 552 aa8.32□□□□□ -1.08
CACNA1C-227ENST00000491104 C4orf3Q8WVX3 66 aa8.32□□□□□ -1.08
CACNA1C-227ENST00000491104 USMG5Q96IX5 58 aa8.32□□□□□ -1.08
CACNA1C-227ENST00000491104 SMIM8Q96KF7 97 aa8.32□□□□□ -1.08
CACNA1C-227ENST00000491104 RAB40CQ96S21 281 aa8.32□□□□□ -1.08
CACNA1C-227ENST00000491104 ZC4H2Q9NQZ6 224 aa8.32□□□□□ -1.08
CACNA1C-227ENST00000491104 THYN1Q9P016 225 aa8.32□□□□□ -1.08
CACNA1C-227ENST00000491104 TRAV14DV4A0A0A6YYC5 116 aa8.31□□□□□ -1.08
CACNA1C-227ENST00000491104 A0A0G2JLM5 398 aa8.31□□□□□ -1.08
CACNA1C-227ENST00000491104 PPP5D1E7EU14 171 aa8.31□□□□□ -1.08
CACNA1C-227ENST00000491104 F8W735 103 aaPredicted RBP8.31□□□□□ -1.08
CACNA1C-227ENST00000491104 CYB5BO43169 146 aa8.31□□□□□ -1.08
CACNA1C-227ENST00000491104 DEDDO75618 318 aa8.31□□□□□ -1.08
CACNA1C-227ENST00000491104 MPC2O95563 127 aa8.31□□□□□ -1.08
CACNA1C-227ENST00000491104 IFNA4P05014 189 aa8.31□□□□□ -1.08
CACNA1C-227ENST00000491104 METTL15P1P0C7V9 234 aa8.31□□□□□ -1.08
CACNA1C-227ENST00000491104 OPRK1P41145 380 aa8.31□□□□□ -1.08
CACNA1C-227ENST00000491104 CYCSP99999 105 aaKnown RBP8.31□□□□□ -1.08
CACNA1C-227ENST00000491104 Q5BKY6 102 aa8.31□□□□□ -1.08
CACNA1C-227ENST00000491104 ZNF343Q6P1L6 599 aa8.31□□□□□ -1.08
CACNA1C-227ENST00000491104 ETV3LQ6ZN32 361 aa8.31□□□□□ -1.08
CACNA1C-227ENST00000491104 HAPLN4Q86UW8 402 aa8.31□□□□□ -1.08
CACNA1C-227ENST00000491104 UBAC2Q8NBM4 344 aa8.31□□□□□ -1.08
CACNA1C-227ENST00000491104 ZNF502Q8TBZ5 544 aa8.31□□□□□ -1.08
CACNA1C-227ENST00000491104 EEF1AKMT3Q96AZ1 226 aa8.31□□□□□ -1.08
CACNA1C-227ENST00000491104 RAX2Q96IS3 184 aa8.31□□□□□ -1.08
CACNA1C-227ENST00000491104 MBD2Q9UBB5 411 aa8.31□□□□□ -1.08
CACNA1C-227ENST00000491104 STRAPQ9Y3F4 350 aaKnown RBP8.31□□□□□ -1.08
CACNA1C-227ENST00000491104 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.3□□□□□ -1.08
CACNA1C-227ENST00000491104 IGSF23A1L1A6 192 aa8.3□□□□□ -1.08
CACNA1C-227ENST00000491104 PMS2P5A8MQ11 134 aa8.3□□□□□ -1.08
CACNA1C-227ENST00000491104 SMLR1H3BR10 107 aa8.3□□□□□ -1.08
CACNA1C-227ENST00000491104 CORTO00230 105 aa8.3□□□□□ -1.08
CACNA1C-227ENST00000491104 TSC22D2O75157 780 aa8.3□□□□□ -1.08
CACNA1C-227ENST00000491104 GIPP09681 153 aaPredicted RBP8.3□□□□□ -1.08
CACNA1C-227ENST00000491104 PVALBP20472 110 aaPredicted RBP8.3□□□□□ -1.08
CACNA1C-227ENST00000491104 GPR183P32249 361 aa8.3□□□□□ -1.08
CACNA1C-227ENST00000491104 CAV2P51636 162 aa8.3□□□□□ -1.08
CACNA1C-227ENST00000491104 TAS2R30P59541 319 aa8.3□□□□□ -1.08
CACNA1C-227ENST00000491104 RAB11AP62491 216 aa8.3□□□□□ -1.08
CACNA1C-227ENST00000491104 RPP30P78346 268 aaKnown RBP8.3□□□□□ -1.08
CACNA1C-227ENST00000491104 CD69Q07108 199 aa8.3□□□□□ -1.08
CACNA1C-227ENST00000491104 Q56UQ5 140 aa8.3□□□□□ -1.08
CACNA1C-227ENST00000491104 OR8G2PQ6IF36 304 aa8.3□□□□□ -1.08
CACNA1C-227ENST00000491104 ACSM6Q6P461 480 aa8.3□□□□□ -1.08
CACNA1C-227ENST00000491104 TMEM14EPQ6UXP3 125 aa8.3□□□□□ -1.08
CACNA1C-227ENST00000491104 SLC16A13Q7RTY0 426 aa8.3□□□□□ -1.08
CACNA1C-227ENST00000491104 OR11H1Q8NG94 326 aa8.3□□□□□ -1.08
CACNA1C-227ENST00000491104 SPATA3Q8NHX4 192 aa8.3□□□□□ -1.08
CACNA1C-227ENST00000491104 VN1R17PQ8TDU5 208 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms