RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 IGHV3-35A0A0C4DH35 117 aa14.47□□□□□ -0.09
EPHB4-207ENST00000489808 TMEM213A2RRL7 107 aa14.47□□□□□ -0.09
EPHB4-207ENST00000489808 MT-CO2P00403 227 aa14.47□□□□□ -0.09
EPHB4-207ENST00000489808 NHLRC4P0CG21 123 aaPredicted RBP14.47□□□□□ -0.09
EPHB4-207ENST00000489808 SPCS3P61009 180 aa14.47□□□□□ -0.09
EPHB4-207ENST00000489808 TM4SF20Q53R12 229 aa14.47□□□□□ -0.09
EPHB4-207ENST00000489808 ZNF57Q68EA5 555 aaPredicted RBP14.47□□□□□ -0.09
EPHB4-207ENST00000489808 SPSB3Q6PJ21 355 aa14.47□□□□□ -0.09
EPHB4-207ENST00000489808 DYNLRB2Q8TF09 96 aa14.47□□□□□ -0.09
EPHB4-207ENST00000489808 CHRDL1Q9BU40 450 aa14.47□□□□□ -0.09
EPHB4-207ENST00000489808 PALMDQ9NP74 551 aa14.47□□□□□ -0.09
EPHB4-207ENST00000489808 PRR13Q9NZ81 148 aa14.47□□□□□ -0.09
EPHB4-207ENST00000489808 A8MWP6 167 aa14.46□□□□□ -0.09
EPHB4-207ENST00000489808 FCGR2BP31994 310 aaPredicted RBP14.46□□□□□ -0.09
EPHB4-207ENST00000489808 ADMP35318 185 aa14.46□□□□□ -0.09
EPHB4-207ENST00000489808 MFAP4P55083 255 aa14.46□□□□□ -0.09
EPHB4-207ENST00000489808 Q56UQ5 140 aa14.46□□□□□ -0.09
EPHB4-207ENST00000489808 PVRIGQ6DKI7 326 aa14.46□□□□□ -0.09
EPHB4-207ENST00000489808 UBAC2Q8NBM4 344 aa14.46□□□□□ -0.09
EPHB4-207ENST00000489808 UXS1Q8NBZ7 420 aa14.46□□□□□ -0.09
EPHB4-207ENST00000489808 SDHCQ99643 169 aaPredicted RBP14.46□□□□□ -0.09
EPHB4-207ENST00000489808 TXN2Q99757 166 aa14.46□□□□□ -0.09
EPHB4-207ENST00000489808 ENY2Q9NPA8 101 aa14.46□□□□□ -0.09
EPHB4-207ENST00000489808 GAR1Q9NY12 217 aaKnown RBP14.46□□□□□ -0.09
EPHB4-207ENST00000489808 CACNG5Q9UF02 275 aa14.46□□□□□ -0.09
EPHB4-207ENST00000489808 ZNF785A8K8V0 405 aa14.45□□□□□ -0.1
EPHB4-207ENST00000489808 CTSGP08311 255 aa14.45□□□□□ -0.1
EPHB4-207ENST00000489808 C8orf88P0DMB2 117 aa14.45□□□□□ -0.1
EPHB4-207ENST00000489808 RNASE2P10153 161 aaKnown RBP14.45□□□□□ -0.1
EPHB4-207ENST00000489808 ANXA3P12429 323 aa14.45□□□□□ -0.1
EPHB4-207ENST00000489808 HOXA1P49639 335 aaPredicted RBP14.45□□□□□ -0.1
EPHB4-207ENST00000489808 SUB1P53999 127 aaKnown RBP eCLIP14.45□□□□□ -0.19e-7■■■□□ 17.7
EPHB4-207ENST00000489808 ELLP55199 621 aaPredicted RBP14.45□□□□□ -0.1
EPHB4-207ENST00000489808 TMEM128Q5BJH2 165 aa14.45□□□□□ -0.1
EPHB4-207ENST00000489808 TMED4Q7Z7H5 227 aa14.45□□□□□ -0.1
EPHB4-207ENST00000489808 CACNG8Q8WXS5 425 aa14.45□□□□□ -0.1
EPHB4-207ENST00000489808 PINX1Q96BK5 328 aaKnown RBP14.45□□□□□ -0.1
EPHB4-207ENST00000489808 ASCL2Q99929 193 aa14.45□□□□□ -0.1
EPHB4-207ENST00000489808 UFC1Q9Y3C8 167 aa14.45□□□□□ -0.1
EPHB4-207ENST00000489808 A0A0B4J2A0 478 aa14.44□□□□□ -0.1
EPHB4-207ENST00000489808 IGHV3-48P01763 117 aa14.44□□□□□ -0.1
EPHB4-207ENST00000489808 C11orf87Q6NUJ2 197 aa14.44□□□□□ -0.1
EPHB4-207ENST00000489808 LYZL2Q7Z4W2 148 aa14.44□□□□□ -0.1
EPHB4-207ENST00000489808 LGI3Q8N145 548 aa14.44□□□□□ -0.1
EPHB4-207ENST00000489808 MARC2Q969Z3 335 aa14.44□□□□□ -0.1
EPHB4-207ENST00000489808 SHPKQ9UHJ6 478 aa14.44□□□□□ -0.1
EPHB4-207ENST00000489808 NDUFA4O00483 81 aa14.43□□□□□ -0.1
EPHB4-207ENST00000489808 NUPL2O15504 423 aaKnown RBP14.43□□□□□ -0.1
EPHB4-207ENST00000489808 FRMD6-AS1P0C7T7 363 aa14.43□□□□□ -0.1
EPHB4-207ENST00000489808 INPP1P49441 399 aa14.43□□□□□ -0.1
EPHB4-207ENST00000489808 SRPXP78539 464 aa14.43□□□□□ -0.1
EPHB4-207ENST00000489808 BSXQ3C1V8 233 aa14.43□□□□□ -0.1
EPHB4-207ENST00000489808 TRIQKQ629K1 86 aa14.43□□□□□ -0.1
EPHB4-207ENST00000489808 TMEM190Q8WZ59 177 aa14.43□□□□□ -0.1
EPHB4-207ENST00000489808 MRPL27Q9P0M9 148 aaKnown RBP14.43□□□□□ -0.1
EPHB4-207ENST00000489808 CACFD1Q9UGQ2 172 aa14.43□□□□□ -0.1
EPHB4-207ENST00000489808 MLXQ9UH92 298 aa14.43□□□□□ -0.1
EPHB4-207ENST00000489808 HUWE1Q7Z6Z7 4374 aaKnown RBP14.43□□□□□ -0.1
EPHB4-207ENST00000489808 NAP1L6A6NFF2 107 aa14.42□□□□□ -0.1
EPHB4-207ENST00000489808 A8MZ25 164 aa14.42□□□□□ -0.1
EPHB4-207ENST00000489808 SULT1A3P0DMM9 295 aa14.42□□□□□ -0.1
EPHB4-207ENST00000489808 SULT1A4P0DMN0 295 aa14.42□□□□□ -0.1
EPHB4-207ENST00000489808 IGHV4-30-4P0DP06 118 aa14.42□□□□□ -0.1
EPHB4-207ENST00000489808 CCR6P51684 374 aa14.42□□□□□ -0.1
EPHB4-207ENST00000489808 NMSQ5H8A3 153 aa14.42□□□□□ -0.1
EPHB4-207ENST00000489808 GTSCR1Q86UQ5 136 aa14.42□□□□□ -0.1
EPHB4-207ENST00000489808 SBSPONQ8IVN8 264 aa14.42□□□□□ -0.1
EPHB4-207ENST00000489808 C19orf73Q9NVV2 129 aa14.42□□□□□ -0.1
EPHB4-207ENST00000489808 PIGBOS1A0A0B4J2F0 54 aa14.41□□□□□ -0.1
EPHB4-207ENST00000489808 CEBPZOSA8MTT3 80 aa14.41□□□□□ -0.1
EPHB4-207ENST00000489808 K7EMT4 169 aa14.41□□□□□ -0.1
EPHB4-207ENST00000489808 CORTO00230 105 aa14.41□□□□□ -0.1
EPHB4-207ENST00000489808 HTR2BP41595 481 aa14.41□□□□□ -0.1
EPHB4-207ENST00000489808 RELQ04864 619 aaPredicted RBP14.41□□□□□ -0.1
EPHB4-207ENST00000489808 DUSP18Q8NEJ0 188 aa14.41□□□□□ -0.1
EPHB4-207ENST00000489808 ZNF414Q96IQ9 312 aa14.41□□□□□ -0.1
EPHB4-207ENST00000489808 HEYLQ9NQ87 328 aaPredicted RBP14.41□□□□□ -0.1
EPHB4-207ENST00000489808 SELENOKQ9Y6D0 94 aa14.41□□□□□ -0.1
EPHB4-207ENST00000489808 LINC00854A0A1B0GVQ3 168 aa14.4□□□□□ -0.1
EPHB4-207ENST00000489808 GNG7O60262 68 aa14.4□□□□□ -0.1
EPHB4-207ENST00000489808 SFT2D2O95562 160 aa14.4□□□□□ -0.1
EPHB4-207ENST00000489808 VAMP1P23763 118 aa14.4□□□□□ -0.1
EPHB4-207ENST00000489808 NPBWR1P48145 328 aa14.4□□□□□ -0.1
EPHB4-207ENST00000489808 SMCO1Q147U7 214 aa14.4□□□□□ -0.1
EPHB4-207ENST00000489808 RBMS2Q15434 407 aaKnown RBP14.4□□□□□ -0.1
EPHB4-207ENST00000489808 MLANAQ16655 118 aa14.4□□□□□ -0.1
EPHB4-207ENST00000489808 GUCA2BQ16661 112 aa14.4□□□□□ -0.1
EPHB4-207ENST00000489808 ANKRD55Q3KP44 614 aa14.4□□□□□ -0.1
EPHB4-207ENST00000489808 BTNL8Q6UX41 500 aa14.4□□□□□ -0.1
EPHB4-207ENST00000489808 WDR89Q96FK6 387 aaPredicted RBP14.4□□□□□ -0.1
EPHB4-207ENST00000489808 C20orf24Q9BUV8 137 aa14.4□□□□□ -0.1
EPHB4-207ENST00000489808 DAZ1Q9NQZ3 744 aaKnown RBP14.4□□□□□ -0.1
EPHB4-207ENST00000489808 A0A1B0GU03 582 aa14.39□□□□□ -0.11
EPHB4-207ENST00000489808 TMEM50AO95807 157 aa14.39□□□□□ -0.11
EPHB4-207ENST00000489808 IL7P13232 177 aa14.39□□□□□ -0.11
EPHB4-207ENST00000489808 PPP1R1AQ13522 171 aa14.39□□□□□ -0.11
EPHB4-207ENST00000489808 TMEM61Q8N0U2 210 aa14.39□□□□□ -0.11
EPHB4-207ENST00000489808 CENPSQ8N2Z9 138 aa14.39□□□□□ -0.11
EPHB4-207ENST00000489808 LRTM2Q8N967 370 aa14.39□□□□□ -0.11
EPHB4-207ENST00000489808 FNDC4Q9H6D8 234 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 187.5 ms