RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 PRR20BP86481 221 aa11.17□□□□□ -0.62
VPS26A-205ENST00000489656 PRR20AP86496 221 aa11.17□□□□□ -0.62
VPS26A-205ENST00000489656 KLK9Q2XQG4 91 aa11.17□□□□□ -0.62
VPS26A-205ENST00000489656 SIGLECL1Q8N7X8 197 aa11.17□□□□□ -0.62
VPS26A-205ENST00000489656 ZNF680Q8NEM1 530 aa11.17□□□□□ -0.62
VPS26A-205ENST00000489656 UQCC1Q9NVA1 299 aa11.17□□□□□ -0.62
VPS26A-205ENST00000489656 ZNF580Q9UK33 172 aa11.17□□□□□ -0.62
VPS26A-205ENST00000489656 KLK9Q9UKQ9 250 aa11.17□□□□□ -0.62
VPS26A-205ENST00000489656 FBXO7Q9Y3I1 522 aa11.17□□□□□ -0.62
VPS26A-205ENST00000489656 ATP6V0E1O15342 81 aa11.16□□□□□ -0.62
VPS26A-205ENST00000489656 HOXA3O43365 443 aaPredicted RBP11.16□□□□□ -0.62
VPS26A-205ENST00000489656 FBXO24O75426 580 aa11.16□□□□□ -0.62
VPS26A-205ENST00000489656 IFNA5P01569 189 aa11.16□□□□□ -0.62
VPS26A-205ENST00000489656 REG1AP05451 166 aa11.16□□□□□ -0.62
VPS26A-205ENST00000489656 MDKP21741 143 aaPredicted RBP11.16□□□□□ -0.62
VPS26A-205ENST00000489656 MFAP2P55001 183 aa11.16□□□□□ -0.62
VPS26A-205ENST00000489656 CD69Q07108 199 aa11.16□□□□□ -0.62
VPS26A-205ENST00000489656 EXOSC2Q13868 293 aaKnown RBP11.16□□□□□ -0.62
VPS26A-205ENST00000489656 AKIRIN2Q53H80 203 aa11.16□□□□□ -0.62
VPS26A-205ENST00000489656 CACNG8Q8WXS5 425 aa11.16□□□□□ -0.62
VPS26A-205ENST00000489656 FAM103A1Q9BTL3 118 aaKnown RBP11.16□□□□□ -0.62
VPS26A-205ENST00000489656 HIVEP2P31629 2446 aa11.16□□□□□ -0.62
VPS26A-205ENST00000489656 IGF1P05019 195 aa11.15□□□□□ -0.62
VPS26A-205ENST00000489656 APELAP0DMC3 54 aa11.15□□□□□ -0.62
VPS26A-205ENST00000489656 C19orf54Q5BKX5 351 aa11.15□□□□□ -0.62
VPS26A-205ENST00000489656 EIF5AL1Q6IS14 154 aaKnown RBP11.15□□□□□ -0.62
VPS26A-205ENST00000489656 FAM110DQ8TAY7 271 aaPredicted RBP11.15□□□□□ -0.62
VPS26A-205ENST00000489656 SCARB1Q8WTV0 552 aa11.15□□□□□ -0.62
VPS26A-205ENST00000489656 SMR3AQ99954 134 aa11.15□□□□□ -0.62
VPS26A-205ENST00000489656 WDR61Q9GZS3 305 aaKnown RBP11.15□□□□□ -0.62
VPS26A-205ENST00000489656 WNT10AQ9GZT5 417 aa11.15□□□□□ -0.62
VPS26A-205ENST00000489656 PARP11Q9NR21 331 aa11.15□□□□□ -0.62
VPS26A-205ENST00000489656 CDC42EP3Q9UKI2 254 aa11.15□□□□□ -0.62
VPS26A-205ENST00000489656 DMRT1Q9Y5R6 373 aa11.15□□□□□ -0.62
VPS26A-205ENST00000489656 HIVEP1P15822 2718 aa11.15□□□□□ -0.63
VPS26A-205ENST00000489656 UBE2L5PA0A1B0GUS4 154 aa11.14□□□□□ -0.63
VPS26A-205ENST00000489656 MPDU1O75352 247 aa11.14□□□□□ -0.63
VPS26A-205ENST00000489656 SEC11BP0C7V7 166 aa11.14□□□□□ -0.63
VPS26A-205ENST00000489656 SPP1P10451 314 aa11.14□□□□□ -0.63
VPS26A-205ENST00000489656 ARSJQ5FYB0 599 aaPredicted RBP11.14□□□□□ -0.63
VPS26A-205ENST00000489656 ETFRF1Q6IPR1 90 aa11.14□□□□□ -0.63
VPS26A-205ENST00000489656 LFNGQ8NES3 379 aa11.14□□□□□ -0.63
VPS26A-205ENST00000489656 GNPNAT1Q96EK6 184 aaPredicted RBP11.14□□□□□ -0.63
VPS26A-205ENST00000489656 NPVFQ9HCQ7 196 aa11.14□□□□□ -0.63
VPS26A-205ENST00000489656 UBQLN2Q9UHD9 624 aa11.14□□□□□ -0.63
VPS26A-205ENST00000489656 WDR83OSQ9Y284 106 aa11.14□□□□□ -0.63
VPS26A-205ENST00000489656 TIMM9Q9Y5J7 89 aa11.14□□□□□ -0.63
VPS26A-205ENST00000489656 IGLV11-55A0A075B6I3 123 aa11.13□□□□□ -0.63
VPS26A-205ENST00000489656 RPS10-NUDT3A0A1W2PQS6 291 aa11.13□□□□□ -0.63
VPS26A-205ENST00000489656 SH2D7A6NKC9 451 aaPredicted RBP11.13□□□□□ -0.63
VPS26A-205ENST00000489656 LINC01548A6NM66 108 aa11.13□□□□□ -0.63
VPS26A-205ENST00000489656 CYB5BO43169 146 aa11.13□□□□□ -0.63
VPS26A-205ENST00000489656 ATP6V0CP27449 155 aa11.13□□□□□ -0.63
VPS26A-205ENST00000489656 BLCAPP62952 87 aa11.13□□□□□ -0.63
VPS26A-205ENST00000489656 SLC25A24Q6NUK1 477 aa11.13□□□□□ -0.63
VPS26A-205ENST00000489656 UNQ5815/PRO19632Q6UWF5 114 aa11.13□□□□□ -0.63
VPS26A-205ENST00000489656 ALKAL2Q6UX46 152 aa11.13□□□□□ -0.63
VPS26A-205ENST00000489656 TREML4Q6UXN2 200 aa11.13□□□□□ -0.63
VPS26A-205ENST00000489656 RBMS3Q6XE24 437 aaKnown RBP11.13□□□□□ -0.63
VPS26A-205ENST00000489656 SLC16A13Q7RTY0 426 aa11.13□□□□□ -0.63
VPS26A-205ENST00000489656 SLC35E3Q7Z769 313 aa11.13□□□□□ -0.63
VPS26A-205ENST00000489656 CENPVQ7Z7K6 275 aaPredicted RBP11.13□□□□□ -0.63
VPS26A-205ENST00000489656 SCGB1C1Q8TD33 95 aa11.13□□□□□ -0.63
VPS26A-205ENST00000489656 TAF15Q92804 592 aaKnown RBP eCLIP11.13□□□□□ -0.63
VPS26A-205ENST00000489656 PSMG3Q9BT73 122 aaPredicted RBP11.13□□□□□ -0.63
VPS26A-205ENST00000489656 FNDC4Q9H6D8 234 aaPredicted RBP11.13□□□□□ -0.63
VPS26A-205ENST00000489656 LSM4Q9Y4Z0 139 aaKnown RBP11.13□□□□□ -0.63
VPS26A-205ENST00000489656 CLDN34H7C241 214 aa11.12□□□□□ -0.63
VPS26A-205ENST00000489656 AP4M1O00189 453 aa11.12□□□□□ -0.63
VPS26A-205ENST00000489656 BRI3O95415 125 aa11.12□□□□□ -0.63
VPS26A-205ENST00000489656 DEFA4P12838 97 aa11.12□□□□□ -0.63
VPS26A-205ENST00000489656 HIST1H1BP16401 226 aaKnown RBP11.12□□□□□ -0.63
VPS26A-205ENST00000489656 SRD5A1P18405 259 aa11.12□□□□□ -0.63
VPS26A-205ENST00000489656 GAMTQ14353 236 aa11.12□□□□□ -0.63
VPS26A-205ENST00000489656 C19orf35Q6ZS72 473 aa11.12□□□□□ -0.63
VPS26A-205ENST00000489656 TMEM144Q7Z5S9 345 aa11.12□□□□□ -0.63
VPS26A-205ENST00000489656 HSD17B11Q8NBQ5 300 aa11.12□□□□□ -0.63
VPS26A-205ENST00000489656 TMED6Q8WW62 240 aa11.12□□□□□ -0.63
VPS26A-205ENST00000489656 SLC35E1Q96K37 410 aa11.12□□□□□ -0.63
VPS26A-205ENST00000489656 FANCD2OSQ96PS1 177 aa11.12□□□□□ -0.63
VPS26A-205ENST00000489656 NPFFR1Q9GZQ6 430 aa11.12□□□□□ -0.63
VPS26A-205ENST00000489656 NSD1Q96L73 2696 aaPredicted RBP11.12□□□□□ -0.63
VPS26A-205ENST00000489656 MTORP42345 2549 aa11.11□□□□□ -0.63
VPS26A-205ENST00000489656 SETXQ7Z333 2677 aaKnown RBP11.11□□□□□ -0.63
VPS26A-205ENST00000489656 TRAV41A0A0B4J266 112 aa11.11□□□□□ -0.63
VPS26A-205ENST00000489656 I3L2K1 104 aa11.11□□□□□ -0.63
VPS26A-205ENST00000489656 SOX15O60248 233 aa11.11□□□□□ -0.63
VPS26A-205ENST00000489656 FGF7P21781 194 aa11.11□□□□□ -0.63
VPS26A-205ENST00000489656 OPRK1P41145 380 aa11.11□□□□□ -0.63
VPS26A-205ENST00000489656 ECSCRQ19T08 205 aa11.11□□□□□ -0.63
VPS26A-205ENST00000489656 C9orf152Q5JTZ5 239 aa11.11□□□□□ -0.63
VPS26A-205ENST00000489656 TEPPQ6URK8 271 aa11.11□□□□□ -0.63
VPS26A-205ENST00000489656 BTNL8Q6UX41 500 aa11.11□□□□□ -0.63
VPS26A-205ENST00000489656 OR2G3Q8NGZ4 309 aa11.11□□□□□ -0.63
VPS26A-205ENST00000489656 MISP3Q96FF7 219 aa11.11□□□□□ -0.63
VPS26A-205ENST00000489656 SLC25A32Q9H2D1 315 aa11.11□□□□□ -0.63
VPS26A-205ENST00000489656 SMCO3A2RU48 225 aa11.1□□□□□ -0.63
VPS26A-205ENST00000489656 DNAJC9-AS1A6NH13 148 aa11.1□□□□□ -0.63
VPS26A-205ENST00000489656 G3V318 75 aa11.1□□□□□ -0.63
VPS26A-205ENST00000489656 H3BUA1 57 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms