RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 TRGV3P03979 118 aa10.84□□□□□ -0.67
C9orf3-221ENST00000489562 OR8U8P0C7N1 319 aa10.84□□□□□ -0.67
C9orf3-221ENST00000489562 SLC25A4P12235 298 aa10.84□□□□□ -0.67
C9orf3-221ENST00000489562 RAB9AP51151 201 aa10.84□□□□□ -0.67
C9orf3-221ENST00000489562 CAV2P51636 162 aa10.84□□□□□ -0.67
C9orf3-221ENST00000489562 TMEM14EPQ6UXP3 125 aa10.84□□□□□ -0.67
C9orf3-221ENST00000489562 TCTE3Q8IZS6 198 aa10.84□□□□□ -0.67
C9orf3-221ENST00000489562 USMG5Q96IX5 58 aa10.84□□□□□ -0.67
C9orf3-221ENST00000489562 ST6GAL2Q96JF0 529 aa10.84□□□□□ -0.67
C9orf3-221ENST00000489562 FANCD2OSQ96PS1 177 aa10.84□□□□□ -0.67
C9orf3-221ENST00000489562 RNF126Q9BV68 326 aa10.84□□□□□ -0.67
C9orf3-221ENST00000489562 SLC25A31Q9H0C2 315 aa10.84□□□□□ -0.67
C9orf3-221ENST00000489562 OR5AC2Q9NZP5 309 aa10.84□□□□□ -0.67
C9orf3-221ENST00000489562 RPS10-NUDT3A0A1W2PQS6 291 aa10.83□□□□□ -0.68
C9orf3-221ENST00000489562 H3BP45 60 aa10.83□□□□□ -0.68
C9orf3-221ENST00000489562 HAX1O00165 279 aa10.83□□□□□ -0.68
C9orf3-221ENST00000489562 PRH1P02810 166 aa10.83□□□□□ -0.68
C9orf3-221ENST00000489562 IFNA4P05014 189 aa10.83□□□□□ -0.68
C9orf3-221ENST00000489562 MFAP2P55001 183 aa10.83□□□□□ -0.68
C9orf3-221ENST00000489562 TPPP2P59282 170 aa10.83□□□□□ -0.68
C9orf3-221ENST00000489562 RHOGP84095 191 aa10.83□□□□□ -0.68
C9orf3-221ENST00000489562 AWAT1Q58HT5 328 aa10.83□□□□□ -0.68
C9orf3-221ENST00000489562 FAM209BQ5JX69 171 aa10.83□□□□□ -0.68
C9orf3-221ENST00000489562 ETFRF1Q6IPR1 90 aa10.83□□□□□ -0.68
C9orf3-221ENST00000489562 STX12Q86Y82 276 aa10.83□□□□□ -0.68
C9orf3-221ENST00000489562 MYOZ3Q8TDC0 251 aa10.83□□□□□ -0.68
C9orf3-221ENST00000489562 WFDC12Q8WWY7 111 aa10.83□□□□□ -0.68
C9orf3-221ENST00000489562 DCUN1D4Q92564 292 aa10.83□□□□□ -0.68
C9orf3-221ENST00000489562 MISP3Q96FF7 219 aa10.83□□□□□ -0.68
C9orf3-221ENST00000489562 CXorf58Q96LI9 332 aa10.83□□□□□ -0.68
C9orf3-221ENST00000489562 OR4C12Q96R67 309 aa10.83□□□□□ -0.68
C9orf3-221ENST00000489562 FBXL7Q9UJT9 491 aa10.83□□□□□ -0.68
C9orf3-221ENST00000489562 PAIP2BQ9ULR5 123 aaKnown RBP10.83□□□□□ -0.68
C9orf3-221ENST00000489562 OR2J3O76001 311 aa10.82□□□□□ -0.68
C9orf3-221ENST00000489562 NUP62P37198 522 aaPredicted RBP10.82□□□□□ -0.68
C9orf3-221ENST00000489562 BAXQ07812 192 aa10.82□□□□□ -0.68
C9orf3-221ENST00000489562 C10orf99Q6UWK7 81 aa10.82□□□□□ -0.68
C9orf3-221ENST00000489562 ETV3LQ6ZN32 361 aa10.82□□□□□ -0.68
C9orf3-221ENST00000489562 C19orf35Q6ZS72 473 aa10.82□□□□□ -0.68
C9orf3-221ENST00000489562 TMEM252Q8N6L7 170 aa10.82□□□□□ -0.68
C9orf3-221ENST00000489562 VN1R17PQ8TDU5 208 aa10.82□□□□□ -0.68
C9orf3-221ENST00000489562 TMEM170AQ8WVE7 144 aa10.82□□□□□ -0.68
C9orf3-221ENST00000489562 MS4A10Q96PG2 267 aa10.82□□□□□ -0.68
C9orf3-221ENST00000489562 DMRT1Q9Y5R6 373 aa10.82□□□□□ -0.68
C9orf3-221ENST00000489562 FAM24AA6NFZ4 105 aa10.81□□□□□ -0.68
C9orf3-221ENST00000489562 G3V3Q6 166 aa10.81□□□□□ -0.68
C9orf3-221ENST00000489562 METTL15P1P0C7V9 234 aa10.81□□□□□ -0.68
C9orf3-221ENST00000489562 GPX4P36969 197 aaPredicted RBP10.81□□□□□ -0.68
C9orf3-221ENST00000489562 OPRK1P41145 380 aa10.81□□□□□ -0.68
C9orf3-221ENST00000489562 SULT1A1P50225 295 aa10.81□□□□□ -0.68
C9orf3-221ENST00000489562 HBG1P69891 147 aa10.81□□□□□ -0.68
C9orf3-221ENST00000489562 HBG2P69892 147 aa10.81□□□□□ -0.68
C9orf3-221ENST00000489562 ATP5G2Q06055 141 aa10.81□□□□□ -0.68
C9orf3-221ENST00000489562 C15orf32Q32M92 178 aa10.81□□□□□ -0.68
C9orf3-221ENST00000489562 Q5BKY6 102 aa10.81□□□□□ -0.68
C9orf3-221ENST00000489562 OR10P1Q8NGE3 313 aa10.81□□□□□ -0.68
C9orf3-221ENST00000489562 CACNG8Q8WXS5 425 aa10.81□□□□□ -0.68
C9orf3-221ENST00000489562 PINX1Q96BK5 328 aaKnown RBP10.81□□□□□ -0.68
C9orf3-221ENST00000489562 UBE2E2Q96LR5 201 aa10.81□□□□□ -0.68
C9orf3-221ENST00000489562 ATP6V0BQ99437 205 aa10.81□□□□□ -0.68
C9orf3-221ENST00000489562 KLK15Q9H2R5 256 aa10.81□□□□□ -0.68
C9orf3-221ENST00000489562 FXYD6-FXYD2A0A087WZ82 144 aa10.8□□□□□ -0.68
C9orf3-221ENST00000489562 TRBV7-1A0A0A6YYK4 115 aa10.8□□□□□ -0.68
C9orf3-221ENST00000489562 IGSF23A1L1A6 192 aa10.8□□□□□ -0.68
C9orf3-221ENST00000489562 I3L2K1 104 aa10.8□□□□□ -0.68
C9orf3-221ENST00000489562 K7EIM0 57 aa10.8□□□□□ -0.68
C9orf3-221ENST00000489562 NDUFB8O95169 186 aa10.8□□□□□ -0.68
C9orf3-221ENST00000489562 MT-CO2P00403 227 aa10.8□□□□□ -0.68
C9orf3-221ENST00000489562 RPLP1P05386 114 aaKnown RBP10.8□□□□□ -0.68
C9orf3-221ENST00000489562 CDX1P47902 265 aaPredicted RBP10.8□□□□□ -0.68
C9orf3-221ENST00000489562 CD69Q07108 199 aa10.8□□□□□ -0.68
C9orf3-221ENST00000489562 ZNF546Q86UE3 836 aa10.8□□□□□ -0.68
C9orf3-221ENST00000489562 ZNF491Q8N8L2 437 aa10.8□□□□□ -0.68
C9orf3-221ENST00000489562 INO80EQ8NBZ0 244 aaPredicted RBP10.8□□□□□ -0.68
C9orf3-221ENST00000489562 EEF1AKMT3Q96AZ1 226 aa10.8□□□□□ -0.68
C9orf3-221ENST00000489562 GAR1Q9NY12 217 aaKnown RBP10.8□□□□□ -0.68
C9orf3-221ENST00000489562 TCRBV4S1A1TA0A5B7 111 aa10.79□□□□□ -0.68
C9orf3-221ENST00000489562 PMS2P5A8MQ11 134 aa10.79□□□□□ -0.68
C9orf3-221ENST00000489562 PRSS46E5RG02 174 aa10.79□□□□□ -0.68
C9orf3-221ENST00000489562 FNDC10F2Z333 226 aa10.79□□□□□ -0.68
C9orf3-221ENST00000489562 C1QBP02746 253 aa10.79□□□□□ -0.68
C9orf3-221ENST00000489562 RPL12P30050 165 aaKnown RBP10.79□□□□□ -0.68
C9orf3-221ENST00000489562 DLK1P80370 383 aa10.79□□□□□ -0.68
C9orf3-221ENST00000489562 EWSR1Q01844 656 aaKnown RBP eCLIP10.79□□□□□ -0.68
C9orf3-221ENST00000489562 KIAA0141Q14154 515 aaPredicted RBP10.79□□□□□ -0.68
C9orf3-221ENST00000489562 TCTEX1D4Q5JR98 221 aa10.79□□□□□ -0.68
C9orf3-221ENST00000489562 OR8G2PQ6IF36 304 aa10.79□□□□□ -0.68
C9orf3-221ENST00000489562 SLC16A13Q7RTY0 426 aa10.79□□□□□ -0.68
C9orf3-221ENST00000489562 SCARB1Q8WTV0 552 aa10.79□□□□□ -0.68
C9orf3-221ENST00000489562 AQP10Q96PS8 301 aa10.79□□□□□ -0.68
C9orf3-221ENST00000489562 TXN2Q99757 166 aa10.79□□□□□ -0.68
C9orf3-221ENST00000489562 NEURL2Q9BR09 285 aa10.79□□□□□ -0.68
C9orf3-221ENST00000489562 GGACTQ9BVM4 153 aa10.79□□□□□ -0.68
C9orf3-221ENST00000489562 ZC4H2Q9NQZ6 224 aa10.79□□□□□ -0.68
C9orf3-221ENST00000489562 TSSC4Q9Y5U2 329 aaPredicted RBP10.79□□□□□ -0.68
C9orf3-221ENST00000489562 HMSDA8MTL9 139 aa10.78□□□□□ -0.68
C9orf3-221ENST00000489562 SMLR1H3BR10 107 aa10.78□□□□□ -0.68
C9orf3-221ENST00000489562 PFDN1O60925 122 aa10.78□□□□□ -0.68
C9orf3-221ENST00000489562 SCGB2A1O75556 95 aa10.78□□□□□ -0.68
C9orf3-221ENST00000489562 CST7O76096 145 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms