RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 OR1L6Q8NGR2 347 aa16.45■□□□□ 0.22
SND1-214ENST00000489417 SCGB1C1Q8TD33 95 aa16.45■□□□□ 0.22
SND1-214ENST00000489417 PHYHIPLQ96FC7 376 aa16.45■□□□□ 0.22
SND1-214ENST00000489417 PARD6GQ9BYG4 376 aaPredicted RBP16.45■□□□□ 0.22
SND1-214ENST00000489417 IGHG2P01859 326 aa16.45■□□□□ 0.22
SND1-214ENST00000489417 GPX4P36969 197 aaPredicted RBP16.45■□□□□ 0.22
SND1-214ENST00000489417 CRIP2P52943 208 aaPredicted RBP16.45■□□□□ 0.22
SND1-214ENST00000489417 CD69Q07108 199 aa16.45■□□□□ 0.22
SND1-214ENST00000489417 ECSCRQ19T08 205 aa16.45■□□□□ 0.22
SND1-214ENST00000489417 ALKAL2Q6UX46 152 aa16.45■□□□□ 0.22
SND1-214ENST00000489417 SLC35E3Q7Z769 313 aa16.45■□□□□ 0.22
SND1-214ENST00000489417 MISP3Q96FF7 219 aa16.45■□□□□ 0.22
SND1-214ENST00000489417 TMEM68Q96MH6 324 aa16.45■□□□□ 0.22
SND1-214ENST00000489417 CDC42EP3Q9UKI2 254 aa16.45■□□□□ 0.22
SND1-214ENST00000489417 MAST4O15021 2626 aa16.44■□□□□ 0.22
SND1-214ENST00000489417 SMCO3A2RU48 225 aa16.44■□□□□ 0.22
SND1-214ENST00000489417 FNDC10F2Z333 226 aa16.44■□□□□ 0.22
SND1-214ENST00000489417 CORTO00230 105 aa16.44■□□□□ 0.22
SND1-214ENST00000489417 DEFA4P12838 97 aa16.44■□□□□ 0.22
SND1-214ENST00000489417 ARSJQ5FYB0 599 aaPredicted RBP16.44■□□□□ 0.22
SND1-214ENST00000489417 SLC16A13Q7RTY0 426 aa16.44■□□□□ 0.22
SND1-214ENST00000489417 FAM110DQ8TAY7 271 aaPredicted RBP16.44■□□□□ 0.22
SND1-214ENST00000489417 WDR61Q9GZS3 305 aaKnown RBP16.44■□□□□ 0.22
SND1-214ENST00000489417 DMRT1Q9Y5R6 373 aa16.44■□□□□ 0.22
SND1-214ENST00000489417 SVEP1Q4LDE5 3571 aa16.43■□□□□ 0.22
SND1-214ENST00000489417 SRD5A1P18405 259 aa16.43■□□□□ 0.22
SND1-214ENST00000489417 ATP6V0CP27449 155 aa16.43■□□□□ 0.22
SND1-214ENST00000489417 OPRK1P41145 380 aa16.43■□□□□ 0.22
SND1-214ENST00000489417 AKIRIN2Q53H80 203 aa16.43■□□□□ 0.22
SND1-214ENST00000489417 EIF5AL1Q6IS14 154 aaKnown RBP16.43■□□□□ 0.22
SND1-214ENST00000489417 OR5T1Q8NG75 326 aa16.43■□□□□ 0.22
SND1-214ENST00000489417 SCARB1Q8WTV0 552 aa16.43■□□□□ 0.22
SND1-214ENST00000489417 TMED6Q8WW62 240 aa16.43■□□□□ 0.22
SND1-214ENST00000489417 CACNG8Q8WXS5 425 aa16.43■□□□□ 0.22
SND1-214ENST00000489417 UBQLN2Q9UHD9 624 aa16.43■□□□□ 0.22
SND1-214ENST00000489417 WDR83OSQ9Y284 106 aa16.43■□□□□ 0.22
SND1-214ENST00000489417 TSPAN9O75954 239 aa16.42■□□□□ 0.22
SND1-214ENST00000489417 IGF1P05019 195 aa16.42■□□□□ 0.22
SND1-214ENST00000489417 FGF7P21781 194 aa16.42■□□□□ 0.22
SND1-214ENST00000489417 RUNX1Q01196 453 aa16.42■□□□□ 0.22
SND1-214ENST00000489417 MLANAQ16655 118 aa16.42■□□□□ 0.22
SND1-214ENST00000489417 TAF15Q92804 592 aaKnown RBP eCLIP16.42■□□□□ 0.22
SND1-214ENST00000489417 GNPNAT1Q96EK6 184 aaPredicted RBP16.42■□□□□ 0.22
SND1-214ENST00000489417 SLC35E1Q96K37 410 aa16.42■□□□□ 0.22
SND1-214ENST00000489417 FNDC4Q9H6D8 234 aaPredicted RBP16.42■□□□□ 0.22
SND1-214ENST00000489417 TRAV41A0A0B4J266 112 aa16.41■□□□□ 0.22
SND1-214ENST00000489417 RPS10-NUDT3A0A1W2PQS6 291 aa16.41■□□□□ 0.22
SND1-214ENST00000489417 G3V318 75 aa16.41■□□□□ 0.22
SND1-214ENST00000489417 CYB5BO43169 146 aa16.41■□□□□ 0.22
SND1-214ENST00000489417 SPP1P10451 314 aa16.41■□□□□ 0.22
SND1-214ENST00000489417 MDKP21741 143 aaPredicted RBP16.41■□□□□ 0.22
SND1-214ENST00000489417 AKR1C1Q04828 323 aa16.41■□□□□ 0.22
SND1-214ENST00000489417 ETFRF1Q6IPR1 90 aa16.41■□□□□ 0.22
SND1-214ENST00000489417 Q6ZS46 218 aa16.41■□□□□ 0.22
SND1-214ENST00000489417 DUX5Q96PT3 197 aa16.41■□□□□ 0.22
SND1-214ENST00000489417 SH3BGRL3Q9H299 93 aa16.41■□□□□ 0.22
SND1-214ENST00000489417 NPVFQ9HCQ7 196 aa16.41■□□□□ 0.22
SND1-214ENST00000489417 ACANP16112 2415 aa16.41■□□□□ 0.22
SND1-214ENST00000489417 DNAJC9-AS1A6NH13 148 aa16.4■□□□□ 0.22
SND1-214ENST00000489417 PRH1P02810 166 aa16.4■□□□□ 0.22
SND1-214ENST00000489417 SEC11BP0C7V7 166 aa16.4■□□□□ 0.22
SND1-214ENST00000489417 GAMTQ14353 236 aa16.4■□□□□ 0.22
SND1-214ENST00000489417 C19orf54Q5BKX5 351 aa16.4■□□□□ 0.22
SND1-214ENST00000489417 BTNL8Q6UX41 500 aa16.4■□□□□ 0.22
SND1-214ENST00000489417 TREML4Q6UXN2 200 aa16.4■□□□□ 0.22
SND1-214ENST00000489417 FANCD2OSQ96PS1 177 aa16.4■□□□□ 0.22
SND1-214ENST00000489417 NPFFR1Q9GZQ6 430 aa16.4■□□□□ 0.22
SND1-214ENST00000489417 SLC25A32Q9H2D1 315 aa16.4■□□□□ 0.22
SND1-214ENST00000489417 GSX1Q9H4S2 264 aaPredicted RBP16.4■□□□□ 0.22
SND1-214ENST00000489417 NAV3Q8IVL0 2385 aa16.39■□□□□ 0.21
SND1-214ENST00000489417 IGLV11-55A0A075B6I3 123 aa16.39■□□□□ 0.21
SND1-214ENST00000489417 AP4M1O00189 453 aa16.39■□□□□ 0.21
SND1-214ENST00000489417 MT-CO2P00403 227 aa16.39■□□□□ 0.21
SND1-214ENST00000489417 Q71RC1 249 aaPredicted RBP16.39■□□□□ 0.21
SND1-214ENST00000489417 PRSS22Q9GZN4 317 aa16.39■□□□□ 0.21
SND1-214ENST00000489417 I3L2K1 104 aa16.38■□□□□ 0.21
SND1-214ENST00000489417 MPDU1O75352 247 aa16.38■□□□□ 0.21
SND1-214ENST00000489417 HIST1H1BP16401 226 aaKnown RBP16.38■□□□□ 0.21
SND1-214ENST00000489417 FAM74A1Q5RGS3 127 aa16.38■□□□□ 0.21
SND1-214ENST00000489417 TMEM144Q7Z5S9 345 aa16.38■□□□□ 0.21
SND1-214ENST00000489417 OR2T6Q8NHC8 308 aa16.38■□□□□ 0.21
SND1-214ENST00000489417 RSG1Q9BU20 258 aa16.38■□□□□ 0.21
SND1-214ENST00000489417 LINC00527Q9UJ94 153 aa16.38■□□□□ 0.21
SND1-214ENST00000489417 ZNF580Q9UK33 172 aa16.38■□□□□ 0.21
SND1-214ENST00000489417 RFNGQ9Y644 331 aa16.38■□□□□ 0.21
SND1-214ENST00000489417 TLN2Q9Y4G6 2542 aa16.38■□□□□ 0.21
SND1-214ENST00000489417 TRIM77I1YAP6 450 aa16.37■□□□□ 0.21
SND1-214ENST00000489417 IGHV3-48P01763 117 aa16.37■□□□□ 0.21
SND1-214ENST00000489417 KLK9Q2XQG4 91 aa16.37■□□□□ 0.21
SND1-214ENST00000489417 TEPPQ6URK8 271 aa16.37■□□□□ 0.21
SND1-214ENST00000489417 OR2G3Q8NGZ4 309 aa16.37■□□□□ 0.21
SND1-214ENST00000489417 ZNF418Q8TF45 676 aaPredicted RBP16.37■□□□□ 0.21
SND1-214ENST00000489417 ACY3Q96HD9 319 aa16.37■□□□□ 0.21
SND1-214ENST00000489417 PSMG3Q9BT73 122 aaPredicted RBP16.37■□□□□ 0.21
SND1-214ENST00000489417 NPCDR1Q9BY65 106 aa16.37■□□□□ 0.21
SND1-214ENST00000489417 KLK9Q9UKQ9 250 aa16.37■□□□□ 0.21
SND1-214ENST00000489417 LSM4Q9Y4Z0 139 aaKnown RBP16.37■□□□□ 0.21
SND1-214ENST00000489417 TIMM9Q9Y5J7 89 aa16.37■□□□□ 0.21
SND1-214ENST00000489417 IGHV3-21A0A0B4J1V1 117 aa16.36■□□□□ 0.21
SND1-214ENST00000489417 INAFM1C9JVW0 142 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms