RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 SLC35B3Q9H1N7 401 aa10.25□□□□□ -0.77
UFD1-209ENST00000489406 IGKV1D-13A0A0B4J2D9 117 aa10.24□□□□□ -0.77
UFD1-209ENST00000489406 SAC3D1A6NKF1 404 aa10.24□□□□□ -0.77
UFD1-209ENST00000489406 FAM90A26D6RGX4 464 aa10.24□□□□□ -0.77
UFD1-209ENST00000489406 BPNT1O95861 308 aa10.24□□□□□ -0.77
UFD1-209ENST00000489406 MT-CO2P00403 227 aa10.24□□□□□ -0.77
UFD1-209ENST00000489406 HLA-DQB1P01920 261 aa10.24□□□□□ -0.77
UFD1-209ENST00000489406 PRM2P04554 102 aa10.24□□□□□ -0.77
UFD1-209ENST00000489406 IGKV1-13P0DP09 117 aa10.24□□□□□ -0.77
UFD1-209ENST00000489406 GABRB1P18505 474 aa10.24□□□□□ -0.77
UFD1-209ENST00000489406 HOXA1P49639 335 aaPredicted RBP10.24□□□□□ -0.77
UFD1-209ENST00000489406 KRTAP10-4P60372 401 aaPredicted RBP10.24□□□□□ -0.77
UFD1-209ENST00000489406 KCTD21Q4G0X4 260 aa10.24□□□□□ -0.77
UFD1-209ENST00000489406 ZNF600Q6ZNG1 722 aa10.24□□□□□ -0.77
UFD1-209ENST00000489406 ZNF709Q8N972 641 aa10.24□□□□□ -0.77
UFD1-209ENST00000489406 ZNF114Q8NC26 417 aa10.24□□□□□ -0.77
UFD1-209ENST00000489406 OR1L8Q8NGR8 309 aa10.24□□□□□ -0.77
UFD1-209ENST00000489406 NDUFA4L2Q9NRX3 87 aa10.24□□□□□ -0.77
UFD1-209ENST00000489406 TMEM140Q9NV12 185 aa10.24□□□□□ -0.77
UFD1-209ENST00000489406 OR2W1Q9Y3N9 320 aa10.24□□□□□ -0.77
UFD1-209ENST00000489406 TNXBP22105 4242 aa10.23□□□□□ -0.77
UFD1-209ENST00000489406 IGKV1D-8A0A087WSZ0 117 aa10.23□□□□□ -0.77
UFD1-209ENST00000489406 CBY3A6NI87 242 aa10.23□□□□□ -0.77
UFD1-209ENST00000489406 SLC22A5O76082 557 aa10.23□□□□□ -0.77
UFD1-209ENST00000489406 NFYAP23511 347 aaPredicted RBP10.23□□□□□ -0.77
UFD1-209ENST00000489406 PPP5CP53041 499 aa10.23□□□□□ -0.77
UFD1-209ENST00000489406 ACSM3Q53FZ2 586 aa10.23□□□□□ -0.77
UFD1-209ENST00000489406 NFE4Q86UQ8 179 aa10.23□□□□□ -0.77
UFD1-209ENST00000489406 SPAG16Q8N0X2 631 aa10.23□□□□□ -0.77
UFD1-209ENST00000489406 METTL26Q96S19 204 aa10.23□□□□□ -0.77
UFD1-209ENST00000489406 DCSTAMPQ9H295 470 aa10.23□□□□□ -0.77
UFD1-209ENST00000489406 MRPS18AQ9NVS2 196 aaKnown RBP10.23□□□□□ -0.77
UFD1-209ENST00000489406 KCNK7Q9Y2U2 307 aa10.23□□□□□ -0.77
UFD1-209ENST00000489406 TRAV26-1A0A087WT03 109 aa10.22□□□□□ -0.77
UFD1-209ENST00000489406 TNFSF12O43508 249 aa10.22□□□□□ -0.77
UFD1-209ENST00000489406 CRYBB3P26998 211 aa10.22□□□□□ -0.77
UFD1-209ENST00000489406 EIF2B2P49770 351 aaKnown RBP10.22□□□□□ -0.77
UFD1-209ENST00000489406 TAS2R31P59538 309 aa10.22□□□□□ -0.77
UFD1-209ENST00000489406 OR5I1Q13606 314 aa10.22□□□□□ -0.77
UFD1-209ENST00000489406 P2RY14Q15391 338 aa10.22□□□□□ -0.77
UFD1-209ENST00000489406 DMBX1Q8NFW5 382 aa10.22□□□□□ -0.77
UFD1-209ENST00000489406 OR4B1Q8NGF8 309 aa10.22□□□□□ -0.77
UFD1-209ENST00000489406 OR4C16Q8NGL9 310 aa10.22□□□□□ -0.77
UFD1-209ENST00000489406 OR1P1Q8NH06 330 aa10.22□□□□□ -0.77
UFD1-209ENST00000489406 PINX1Q96BK5 328 aaKnown RBP10.22□□□□□ -0.77
UFD1-209ENST00000489406 TMEM208Q9BTX3 173 aa10.22□□□□□ -0.77
UFD1-209ENST00000489406 FGF20Q9NP95 211 aaPredicted RBP10.22□□□□□ -0.77
UFD1-209ENST00000489406 ARL2BPQ9Y2Y0 163 aa10.22□□□□□ -0.77
UFD1-209ENST00000489406 A0A0J9YY99 117 aa10.21□□□□□ -0.77
UFD1-209ENST00000489406 ZNF705GA8MUZ8 300 aaPredicted RBP10.21□□□□□ -0.77
UFD1-209ENST00000489406 M0QYG6 137 aa10.21□□□□□ -0.77
UFD1-209ENST00000489406 SIVA1O15304 175 aa10.21□□□□□ -0.77
UFD1-209ENST00000489406 ATP8B1O43520 1251 aa10.21□□□□□ -0.77
UFD1-209ENST00000489406 GAS8-AS1O95177 125 aa10.21□□□□□ -0.77
UFD1-209ENST00000489406 NQO2P16083 231 aa10.21□□□□□ -0.77
UFD1-209ENST00000489406 POU2AF1Q16633 256 aa10.21□□□□□ -0.77
UFD1-209ENST00000489406 ZIK1Q3SY52 487 aaPredicted RBP10.21□□□□□ -0.77
UFD1-209ENST00000489406 RXFP4Q8TDU9 374 aa10.21□□□□□ -0.77
UFD1-209ENST00000489406 GLMPQ8WWB7 406 aa10.21□□□□□ -0.77
UFD1-209ENST00000489406 NARS2Q96I59 477 aaKnown RBP10.21□□□□□ -0.77
UFD1-209ENST00000489406 ZNF446Q9NWS9 450 aa10.21□□□□□ -0.77
UFD1-209ENST00000489406 INSL4Q14641 139 aa10.2□□□□□ -0.78
UFD1-209ENST00000489406 KIR3DS1Q14943 382 aa10.2□□□□□ -0.78
UFD1-209ENST00000489406 OR56B1Q8NGI3 324 aa10.2□□□□□ -0.78
UFD1-209ENST00000489406 CLEC2DQ9UHP7 191 aa10.2□□□□□ -0.78
UFD1-209ENST00000489406 OAZ3Q9UMX2 235 aa10.2□□□□□ -0.78
UFD1-209ENST00000489406 FGF2P09038 288 aa10.19□□□□□ -0.78
UFD1-209ENST00000489406 NKX2-1P43699 371 aaPredicted RBP10.19□□□□□ -0.78
UFD1-209ENST00000489406 AP2S1P53680 142 aaPredicted RBP10.19□□□□□ -0.78
UFD1-209ENST00000489406 PQLC1Q8N2U9 271 aa10.19□□□□□ -0.78
UFD1-209ENST00000489406 NSG2Q9Y328 171 aa10.19□□□□□ -0.78
UFD1-209ENST00000489406 SULT1C2O00338 296 aa10.18□□□□□ -0.78
UFD1-209ENST00000489406 EBAG9O00559 213 aa10.18□□□□□ -0.78
UFD1-209ENST00000489406 HPRT1P00492 218 aa10.18□□□□□ -0.78
UFD1-209ENST00000489406 MT1HL1P0DM35 61 aa10.18□□□□□ -0.78
UFD1-209ENST00000489406 MAPK3P27361 379 aaPredicted RBP10.18□□□□□ -0.78
UFD1-209ENST00000489406 NPBWR1P48145 328 aa10.18□□□□□ -0.78
UFD1-209ENST00000489406 PSG9Q00887 426 aa10.18□□□□□ -0.78
UFD1-209ENST00000489406 RHOXF1Q8NHV9 184 aa10.18□□□□□ -0.78
UFD1-209ENST00000489406 CENPOQ9BU64 300 aa10.18□□□□□ -0.78
UFD1-209ENST00000489406 SAV1Q9H4B6 383 aaPredicted RBP10.18□□□□□ -0.78
UFD1-209ENST00000489406 SEPSECSQ9HD40 501 aaKnown RBP10.18□□□□□ -0.78
UFD1-209ENST00000489406 FAM212BQ9NTI7 297 aaPredicted RBP10.18□□□□□ -0.78
UFD1-209ENST00000489406 OR51B2Q9Y5P1 312 aa10.18□□□□□ -0.78
UFD1-209ENST00000489406 A0A075B6Q4 140 aa10.17□□□□□ -0.78
UFD1-209ENST00000489406 RBFOX2O43251 390 aaKnown RBP eCLIP10.17□□□□□ -0.783e-7■□□□□ 8.1
UFD1-209ENST00000489406 TMEM50AO95807 157 aa10.17□□□□□ -0.78
UFD1-209ENST00000489406 C1QBP02746 253 aa10.17□□□□□ -0.78
UFD1-209ENST00000489406 M6PRP20645 277 aa10.17□□□□□ -0.78
UFD1-209ENST00000489406 NTN5Q8WTR8 489 aaPredicted RBP10.17□□□□□ -0.78
UFD1-209ENST00000489406 RAB3CQ96E17 227 aa10.17□□□□□ -0.78
UFD1-209ENST00000489406 TMEM56Q96MV1 263 aa10.17□□□□□ -0.78
UFD1-209ENST00000489406 NRN1Q9NPD7 142 aa10.17□□□□□ -0.78
UFD1-209ENST00000489406 POMPQ9Y244 141 aa10.17□□□□□ -0.78
UFD1-209ENST00000489406 FAT4Q6V0I7 4981 aa10.16□□□□□ -0.78
UFD1-209ENST00000489406 TALDO1P37837 337 aa10.16□□□□□ -0.78
UFD1-209ENST00000489406 RASSF2P50749 326 aa10.16□□□□□ -0.78
UFD1-209ENST00000489406 ST3GAL4Q11206 333 aa10.16□□□□□ -0.78
UFD1-209ENST00000489406 C16orf54Q6UWD8 224 aa10.16□□□□□ -0.78
UFD1-209ENST00000489406 Q6ZS49 121 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms