RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 S100A5P33763 92 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 TAS2R43P59537 309 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 KRTAP10-1P60331 282 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 WT1-ASQ06250 92 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 INSL4Q14641 139 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 SMN1Q16637 294 aaKnown RBP6.42□□□□□ -1.38
SSBP1-212ENST00000489378 TIMM50Q3ZCQ8 353 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 TTC23Q5W5X9 447 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 Q6ZSN1 163 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 LRRTM1Q86UE6 522 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 C15orf53Q8NAA6 179 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 DUSP18Q8NEJ0 188 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 TCTEX1D2Q8WW35 142 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 APH1BQ8WW43 257 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 Q96MT0 163 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 ABHD1Q96SE0 405 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 GPHA2Q96T91 129 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 URM1Q9BTM9 101 aaKnown RBP6.42□□□□□ -1.38
SSBP1-212ENST00000489378 SLC5A7Q9GZV3 580 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 HRASLSQ9HDD0 168 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 BET1LQ9NYM9 111 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 PLA2G2DQ9UNK4 145 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 KCNK7Q9Y2U2 307 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 LINC00588Q9Y4M8 146 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 IGKV1D-8A0A087WSZ0 117 aa6.41□□□□□ -1.38
SSBP1-212ENST00000489378 KRTAP29-1A8MX34 341 aaPredicted RBP6.41□□□□□ -1.38
SSBP1-212ENST00000489378 K7EQG2 157 aa6.41□□□□□ -1.38
SSBP1-212ENST00000489378 GYG2O15488 501 aa6.41□□□□□ -1.38
SSBP1-212ENST00000489378 DIRAS3O95661 229 aa6.41□□□□□ -1.38
SSBP1-212ENST00000489378 CD5P06127 495 aa6.41□□□□□ -1.38
SSBP1-212ENST00000489378 CDK1P06493 297 aa6.41□□□□□ -1.38
SSBP1-212ENST00000489378 SERPINE2P07093 398 aa6.41□□□□□ -1.38
SSBP1-212ENST00000489378 HAMPP81172 84 aa6.41□□□□□ -1.38
SSBP1-212ENST00000489378 EIF4EBP1Q13541 118 aaPredicted RBP6.41□□□□□ -1.38
SSBP1-212ENST00000489378 P2RY14Q15391 338 aa6.41□□□□□ -1.38
SSBP1-212ENST00000489378 ZNF705AQ6ZN79 300 aaPredicted RBP6.41□□□□□ -1.38
SSBP1-212ENST00000489378 ZNF485Q8NCK3 441 aa6.41□□□□□ -1.38
SSBP1-212ENST00000489378 NEU1Q99519 415 aa6.41□□□□□ -1.38
SSBP1-212ENST00000489378 BCL7BQ9BQE9 202 aa6.41□□□□□ -1.38
SSBP1-212ENST00000489378 SRSF8Q9BRL6 282 aaKnown RBP6.41□□□□□ -1.38
SSBP1-212ENST00000489378 QTRT1Q9BXR0 403 aaKnown RBP6.41□□□□□ -1.38
SSBP1-212ENST00000489378 PRR13Q9NZ81 148 aa6.41□□□□□ -1.38
SSBP1-212ENST00000489378 SPATA2Q9UM82 520 aa6.41□□□□□ -1.38
SSBP1-212ENST00000489378 AP4S1Q9Y587 144 aa6.41□□□□□ -1.38
SSBP1-212ENST00000489378 IGKV1D-13A0A0B4J2D9 117 aa6.4□□□□□ -1.39
SSBP1-212ENST00000489378 TMEM189A5PLL7 270 aa6.4□□□□□ -1.39
SSBP1-212ENST00000489378 ZNF705FA8MVS1 300 aaPredicted RBP6.4□□□□□ -1.39
SSBP1-212ENST00000489378 CYB5BO43169 146 aa6.4□□□□□ -1.39
SSBP1-212ENST00000489378 HRASP01112 189 aa6.4□□□□□ -1.39
SSBP1-212ENST00000489378 EIF4EP06730 217 aaKnown RBP6.4□□□□□ -1.39
SSBP1-212ENST00000489378 ZNF705DP0CH99 300 aaPredicted RBP6.4□□□□□ -1.39
SSBP1-212ENST00000489378 ZNF705BP0CI00 300 aaPredicted RBP6.4□□□□□ -1.39
SSBP1-212ENST00000489378 IGKV1-13P0DP09 117 aa6.4□□□□□ -1.39
SSBP1-212ENST00000489378 CD36P16671 472 aa6.4□□□□□ -1.39
SSBP1-212ENST00000489378 DCKP27707 260 aa6.4□□□□□ -1.39
SSBP1-212ENST00000489378 OXA1LQ15070 435 aa6.4□□□□□ -1.39
SSBP1-212ENST00000489378 AARDQ4LEZ3 155 aa6.4□□□□□ -1.39
SSBP1-212ENST00000489378 STXBP6Q8NFX7 210 aa6.4□□□□□ -1.39
SSBP1-212ENST00000489378 CENPNQ96H22 339 aaPredicted RBP6.4□□□□□ -1.39
SSBP1-212ENST00000489378 GRAMD2BQ96HH9 432 aa6.4□□□□□ -1.39
SSBP1-212ENST00000489378 RAB40CQ96S21 281 aa6.4□□□□□ -1.39
SSBP1-212ENST00000489378 NXF2Q9GZY0 626 aaKnown RBP6.4□□□□□ -1.39
SSBP1-212ENST00000489378 PTTG2Q9NZH5 202 aa6.4□□□□□ -1.39
SSBP1-212ENST00000489378 F11RQ9Y624 299 aaKnown RBP6.4□□□□□ -1.39
SSBP1-212ENST00000489378 IGHV3OR16-12A0A075B7B8 117 aa6.39□□□□□ -1.39
SSBP1-212ENST00000489378 UPK2O00526 184 aa6.39□□□□□ -1.39
SSBP1-212ENST00000489378 EI24O14681 340 aa6.39□□□□□ -1.39
SSBP1-212ENST00000489378 ATP5HO75947 161 aa6.39□□□□□ -1.39
SSBP1-212ENST00000489378 CD37P11049 281 aa6.39□□□□□ -1.39
SSBP1-212ENST00000489378 DNAL1Q4LDG9 190 aa6.39□□□□□ -1.39
SSBP1-212ENST00000489378 RBM48Q5RL73 367 aaKnown RBP6.39□□□□□ -1.39
SSBP1-212ENST00000489378 ZNF773Q6PK81 442 aa6.39□□□□□ -1.39
SSBP1-212ENST00000489378 TOMM20LQ6UXN7 152 aa6.39□□□□□ -1.39
SSBP1-212ENST00000489378 CBR4Q8N4T8 237 aa6.39□□□□□ -1.39
SSBP1-212ENST00000489378 HSD17B10Q99714 261 aaKnown RBP6.39□□□□□ -1.39
SSBP1-212ENST00000489378 C1QTNF4Q9BXJ3 329 aa6.39□□□□□ -1.39
SSBP1-212ENST00000489378 COMMD5Q9GZQ3 224 aa6.39□□□□□ -1.39
SSBP1-212ENST00000489378 TAS2R8Q9NYW2 309 aa6.39□□□□□ -1.39
SSBP1-212ENST00000489378 ORC6Q9Y5N6 252 aa6.39□□□□□ -1.39
SSBP1-212ENST00000489378 RFNGQ9Y644 331 aa6.39□□□□□ -1.39
SSBP1-212ENST00000489378 TEX48A0A1B0GUV7 120 aa6.38□□□□□ -1.39
SSBP1-212ENST00000489378 RPS10-NUDT3A0A1W2PQS6 291 aa6.38□□□□□ -1.39
SSBP1-212ENST00000489378 XKRY2A2RUG3 117 aa6.38□□□□□ -1.39
SSBP1-212ENST00000489378 SMIM9A6NGZ8 99 aa6.38□□□□□ -1.39
SSBP1-212ENST00000489378 ZNF561-AS1K7EIQ3 104 aa6.38□□□□□ -1.39
SSBP1-212ENST00000489378 WBP4O75554 376 aaKnown RBP6.38□□□□□ -1.39
SSBP1-212ENST00000489378 NUDT3O95989 172 aa6.38□□□□□ -1.39
SSBP1-212ENST00000489378 IGHV3-48P01763 117 aa6.38□□□□□ -1.39
SSBP1-212ENST00000489378 HLA-DQB1P01920 261 aa6.38□□□□□ -1.39
SSBP1-212ENST00000489378 PLA2G1BP04054 148 aaKnown RBP6.38□□□□□ -1.39
SSBP1-212ENST00000489378 TRAPPC2P0DI81 140 aa6.38□□□□□ -1.39
SSBP1-212ENST00000489378 TRAPPC2BP0DI82 140 aa6.38□□□□□ -1.39
SSBP1-212ENST00000489378 FCGR1AP12314 374 aa6.38□□□□□ -1.39
SSBP1-212ENST00000489378 GNB3P16520 340 aa6.38□□□□□ -1.39
SSBP1-212ENST00000489378 MYL12AP19105 171 aa6.38□□□□□ -1.39
SSBP1-212ENST00000489378 NFYAP23511 347 aaPredicted RBP6.38□□□□□ -1.39
SSBP1-212ENST00000489378 FGF9P31371 208 aaPredicted RBP6.38□□□□□ -1.39
SSBP1-212ENST00000489378 CCL18P55774 89 aa6.38□□□□□ -1.39
SSBP1-212ENST00000489378 MRPS15P82914 257 aaKnown RBP6.38□□□□□ -1.39
SSBP1-212ENST00000489378 ICAM4Q14773 271 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms