RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 RAB3BP20337 219 aa11.56□□□□□ -0.56
USP48-210ENST00000489108 FXYD4P59646 89 aa11.56□□□□□ -0.56
USP48-210ENST00000489108 ARPC4P59998 168 aa11.56□□□□□ -0.56
USP48-210ENST00000489108 RCN1Q15293 331 aa11.56□□□□□ -0.56
USP48-210ENST00000489108 AADACL3Q5VUY0 350 aa11.56□□□□□ -0.56
USP48-210ENST00000489108 TMEM56Q96MV1 263 aa11.56□□□□□ -0.56
USP48-210ENST00000489108 APOBP04114 4563 aaKnown RBP11.56□□□□□ -0.56
USP48-210ENST00000489108 DBX1A6NMT0 343 aa11.55□□□□□ -0.56
USP48-210ENST00000489108 MARCH11A6NNE9 402 aa11.55□□□□□ -0.56
USP48-210ENST00000489108 GNG7O60262 68 aa11.55□□□□□ -0.56
USP48-210ENST00000489108 SNAPC5O75971 98 aa11.55□□□□□ -0.56
USP48-210ENST00000489108 MT-CO2P00403 227 aa11.55□□□□□ -0.56
USP48-210ENST00000489108 KRASP01116 189 aa11.55□□□□□ -0.56
USP48-210ENST00000489108 ZNF688P0C7X2 276 aa11.55□□□□□ -0.56
USP48-210ENST00000489108 STXBP6Q8NFX7 210 aa11.55□□□□□ -0.56
USP48-210ENST00000489108 GRAMD2BQ96HH9 432 aa11.55□□□□□ -0.56
USP48-210ENST00000489108 MGLLQ99685 303 aa11.55□□□□□ -0.56
USP48-210ENST00000489108 CCDC90BQ9GZT6 254 aa11.55□□□□□ -0.56
USP48-210ENST00000489108 SMIM30A4D0T7 59 aa11.54□□□□□ -0.56
USP48-210ENST00000489108 G6PCP35575 357 aa11.54□□□□□ -0.56
USP48-210ENST00000489108 LPAR6P43657 344 aa11.54□□□□□ -0.56
USP48-210ENST00000489108 RNF212Q495C1 297 aa11.54□□□□□ -0.56
USP48-210ENST00000489108 BEST4Q8NFU0 473 aa11.54□□□□□ -0.56
USP48-210ENST00000489108 PINX1Q96BK5 328 aaKnown RBP11.54□□□□□ -0.56
USP48-210ENST00000489108 ZFAND3Q9H8U3 227 aa11.54□□□□□ -0.56
USP48-210ENST00000489108 PUS1Q9Y606 427 aaKnown RBP eCLIP11.54□□□□□ -0.56
USP48-210ENST00000489108 CASQ2O14958 399 aaPredicted RBP11.53□□□□□ -0.56
USP48-210ENST00000489108 MYL9P24844 172 aa11.53□□□□□ -0.56
USP48-210ENST00000489108 FCAMRQ8WWV6 532 aa11.53□□□□□ -0.56
USP48-210ENST00000489108 MOB3AQ96BX8 217 aa11.53□□□□□ -0.56
USP48-210ENST00000489108 FAM210BQ96KR6 192 aa11.53□□□□□ -0.56
USP48-210ENST00000489108 TMEM231Q9H6L2 316 aa11.53□□□□□ -0.56
USP48-210ENST00000489108 PRNDQ9UKY0 176 aa11.53□□□□□ -0.56
USP48-210ENST00000489108 A0A1B0GU03 582 aa11.52□□□□□ -0.57
USP48-210ENST00000489108 FCER2P06734 321 aa11.52□□□□□ -0.57
USP48-210ENST00000489108 SPART-AS1P0CW21 52 aa11.52□□□□□ -0.57
USP48-210ENST00000489108 NPPCP23582 126 aa11.52□□□□□ -0.57
USP48-210ENST00000489108 F2RP25116 425 aa11.52□□□□□ -0.57
USP48-210ENST00000489108 EMP1P54849 157 aa11.52□□□□□ -0.57
USP48-210ENST00000489108 ZNF600Q6ZNG1 722 aa11.52□□□□□ -0.57
USP48-210ENST00000489108 TPRA1Q86W33 373 aa11.52□□□□□ -0.57
USP48-210ENST00000489108 TMEM17Q86X19 198 aa11.52□□□□□ -0.57
USP48-210ENST00000489108 DCANP1Q8TF63 244 aa11.52□□□□□ -0.57
USP48-210ENST00000489108 RAB40CQ96S21 281 aa11.52□□□□□ -0.57
USP48-210ENST00000489108 DUSP21Q9H596 190 aa11.52□□□□□ -0.57
USP48-210ENST00000489108 FKBP11Q9NYL4 201 aa11.52□□□□□ -0.57
USP48-210ENST00000489108 XCL2Q9UBD3 114 aa11.52□□□□□ -0.57
USP48-210ENST00000489108 A0A1W2PS18 150 aa11.51□□□□□ -0.57
USP48-210ENST00000489108 RGS10O43665 173 aa11.51□□□□□ -0.57
USP48-210ENST00000489108 GNRHRP30968 328 aa11.51□□□□□ -0.57
USP48-210ENST00000489108 HOGA1Q86XE5 327 aa11.51□□□□□ -0.57
USP48-210ENST00000489108 CADM3Q8N126 398 aa11.51□□□□□ -0.57
USP48-210ENST00000489108 TPRKBQ9Y3C4 175 aa11.51□□□□□ -0.57
USP48-210ENST00000489108 PGLYRP1O75594 196 aaPredicted RBP11.5□□□□□ -0.57
USP48-210ENST00000489108 RLN1P04808 185 aa11.5□□□□□ -0.57
USP48-210ENST00000489108 DNAH5Q8TE73 4624 aa11.5□□□□□ -0.57
USP48-210ENST00000489108 SCGNO76038 276 aa11.49□□□□□ -0.57
USP48-210ENST00000489108 TMEM50AO95807 157 aa11.49□□□□□ -0.57
USP48-210ENST00000489108 P2RY1P47900 373 aa11.49□□□□□ -0.57
USP48-210ENST00000489108 NPBWR1P48145 328 aa11.49□□□□□ -0.57
USP48-210ENST00000489108 PPP5CP53041 499 aa11.49□□□□□ -0.57
USP48-210ENST00000489108 ZNF367Q7RTV3 350 aa11.49□□□□□ -0.57
USP48-210ENST00000489108 ZNF114Q8NC26 417 aa11.49□□□□□ -0.57
USP48-210ENST00000489108 C1QTNF4Q9BXJ3 329 aa11.49□□□□□ -0.57
USP48-210ENST00000489108 TRAV18A0A075B6X5 111 aa11.48□□□□□ -0.57
USP48-210ENST00000489108 TRDV1A0A1B0GX56 115 aa11.48□□□□□ -0.57
USP48-210ENST00000489108 HTN3P15516 51 aa11.48□□□□□ -0.57
USP48-210ENST00000489108 DHRS2Q13268 280 aa11.48□□□□□ -0.57
USP48-210ENST00000489108 PSMG4Q5JS54 123 aa11.48□□□□□ -0.57
USP48-210ENST00000489108 OGFRL1Q5TC84 451 aaPredicted RBP11.48□□□□□ -0.57
USP48-210ENST00000489108 C22orf42Q6IC83 251 aa11.48□□□□□ -0.57
USP48-210ENST00000489108 TSPAN14Q8NG11 270 aa11.48□□□□□ -0.57
USP48-210ENST00000489108 NOTOA8MTQ0 251 aa11.47□□□□□ -0.57
USP48-210ENST00000489108 CRYBB3P26998 211 aa11.47□□□□□ -0.57
USP48-210ENST00000489108 HERV-K104P61576 105 aa11.47□□□□□ -0.57
USP48-210ENST00000489108 NUTF2P61970 127 aaKnown RBP11.47□□□□□ -0.57
USP48-210ENST00000489108 METTL26Q96S19 204 aa11.47□□□□□ -0.57
USP48-210ENST00000489108 NEU1Q99519 415 aa11.47□□□□□ -0.57
USP48-210ENST00000489108 TSC22D3Q99576 134 aa11.47□□□□□ -0.57
USP48-210ENST00000489108 NIPSNAP3BQ9BS92 247 aa11.47□□□□□ -0.57
USP48-210ENST00000489108 DKK2Q9UBU2 259 aa11.47□□□□□ -0.57
USP48-210ENST00000489108 TMEM189A5PLL7 270 aa11.46□□□□□ -0.57
USP48-210ENST00000489108 HELTA6NFD8 242 aa11.46□□□□□ -0.57
USP48-210ENST00000489108 FGF9P31371 208 aaPredicted RBP11.46□□□□□ -0.57
USP48-210ENST00000489108 ERHP84090 104 aaKnown RBP11.46□□□□□ -0.57
USP48-210ENST00000489108 FAM222AQ5U5X8 452 aa11.46□□□□□ -0.57
USP48-210ENST00000489108 TMEM88Q6PEY1 159 aa11.46□□□□□ -0.57
USP48-210ENST00000489108 ZNF705AQ6ZN79 300 aaPredicted RBP11.46□□□□□ -0.57
USP48-210ENST00000489108 PRSS48Q7RTY5 328 aa11.46□□□□□ -0.57
USP48-210ENST00000489108 C6orf223Q8N319 242 aa11.46□□□□□ -0.57
USP48-210ENST00000489108 OR5AP2Q8NGF4 316 aa11.46□□□□□ -0.57
USP48-210ENST00000489108 LGALS14Q8TCE9 139 aa11.46□□□□□ -0.57
USP48-210ENST00000489108 BORCS5Q969J3 196 aa11.46□□□□□ -0.57
USP48-210ENST00000489108 RNF167Q9H6Y7 350 aa11.46□□□□□ -0.57
USP48-210ENST00000489108 RHBDL2Q9NX52 303 aa11.46□□□□□ -0.57
USP48-210ENST00000489108 DAPK2Q9UIK4 370 aa11.46□□□□□ -0.57
USP48-210ENST00000489108 IGHV3OR16-12A0A075B7B8 117 aa11.45□□□□□ -0.58
USP48-210ENST00000489108 ZNF705FA8MVS1 300 aaPredicted RBP11.45□□□□□ -0.58
USP48-210ENST00000489108 H3BMM0 161 aa11.45□□□□□ -0.58
USP48-210ENST00000489108 ZNF705DP0CH99 300 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 341.4 ms