RNA–Protein interactions for RNA: ENST00000488344.6

VAMP7-206, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 2

Gene VAMP7, Length 696 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-206ENST00000488344 CTSGP08311 255 aa8.32□□□□□ -1.08
VAMP7-206ENST00000488344 RPL35AP18077 110 aaKnown RBP8.32□□□□□ -1.08
VAMP7-206ENST00000488344 NPBWR1P48145 328 aa8.32□□□□□ -1.08
VAMP7-206ENST00000488344 HSPE1P61604 102 aaKnown RBP8.32□□□□□ -1.08
VAMP7-206ENST00000488344 PRCDQ00LT1 54 aa8.32□□□□□ -1.08
VAMP7-206ENST00000488344 TBC1D26Q86UD7 250 aa8.32□□□□□ -1.08
VAMP7-206ENST00000488344 ZNF486Q96H40 463 aaPredicted RBP8.32□□□□□ -1.08
VAMP7-206ENST00000488344 SEC22AQ96IW7 307 aa8.32□□□□□ -1.08
VAMP7-206ENST00000488344 NXF2Q9GZY0 626 aaKnown RBP8.32□□□□□ -1.08
VAMP7-206ENST00000488344 MFFQ9GZY8 342 aa8.32□□□□□ -1.08
VAMP7-206ENST00000488344 CSTL1Q9H114 145 aa8.32□□□□□ -1.08
VAMP7-206ENST00000488344 TMEM231Q9H6L2 316 aa8.32□□□□□ -1.08
VAMP7-206ENST00000488344 MPTX1A8MV57 137 aa8.31□□□□□ -1.08
VAMP7-206ENST00000488344 I3L2K1 104 aa8.31□□□□□ -1.08
VAMP7-206ENST00000488344 CORTO00230 105 aa8.31□□□□□ -1.08
VAMP7-206ENST00000488344 CHEK1O14757 476 aa8.31□□□□□ -1.08
VAMP7-206ENST00000488344 ZNF207O43670 478 aaKnown RBP8.31□□□□□ -1.08
VAMP7-206ENST00000488344 TNFAIP8O95379 198 aa8.31□□□□□ -1.08
VAMP7-206ENST00000488344 MT-CO2P00403 227 aa8.31□□□□□ -1.08
VAMP7-206ENST00000488344 SNCAP37840 140 aa8.31□□□□□ -1.08
VAMP7-206ENST00000488344 LYSMD2Q8IV50 215 aa8.31□□□□□ -1.08
VAMP7-206ENST00000488344 SLC35G3Q8N808 338 aa8.31□□□□□ -1.08
VAMP7-206ENST00000488344 DUSP18Q8NEJ0 188 aa8.31□□□□□ -1.08
VAMP7-206ENST00000488344 YIPF6Q96EC8 236 aa8.31□□□□□ -1.08
VAMP7-206ENST00000488344 RNF2Q99496 336 aa8.31□□□□□ -1.08
VAMP7-206ENST00000488344 LYSTQ99698 3801 aa8.31□□□□□ -1.08
VAMP7-206ENST00000488344 PDCD10Q9BUL8 212 aa8.31□□□□□ -1.08
VAMP7-206ENST00000488344 COMMD3Q9UBI1 195 aa8.31□□□□□ -1.08
VAMP7-206ENST00000488344 IGHV3OR16-8A0A075B7F1 116 aa8.3□□□□□ -1.08
VAMP7-206ENST00000488344 TRAV2A0A0B4J234 112 aa8.3□□□□□ -1.08
VAMP7-206ENST00000488344 DNASE2O00115 360 aaPredicted RBP8.3□□□□□ -1.08
VAMP7-206ENST00000488344 DFFBO76075 338 aa8.3□□□□□ -1.08
VAMP7-206ENST00000488344 PGAM2P15259 253 aa8.3□□□□□ -1.08
VAMP7-206ENST00000488344 TBPP20226 339 aa8.3□□□□□ -1.08
VAMP7-206ENST00000488344 AKR1C2P52895 323 aa8.3□□□□□ -1.08
VAMP7-206ENST00000488344 SUB1P53999 127 aaKnown RBP eCLIP8.3□□□□□ -1.08
VAMP7-206ENST00000488344 RND3P61587 244 aa8.3□□□□□ -1.08
VAMP7-206ENST00000488344 LSM3P62310 102 aaKnown RBP8.3□□□□□ -1.08
VAMP7-206ENST00000488344 MZT2AQ6P582 158 aa8.3□□□□□ -1.08
VAMP7-206ENST00000488344 SNX29P2Q8IUI4 249 aa8.3□□□□□ -1.08
VAMP7-206ENST00000488344 MRGPRFQ96AM1 343 aa8.3□□□□□ -1.08
VAMP7-206ENST00000488344 PINX1Q96BK5 328 aaKnown RBP8.3□□□□□ -1.08
VAMP7-206ENST00000488344 C11orf68Q9H3H3 251 aaKnown RBP8.3□□□□□ -1.08
VAMP7-206ENST00000488344 BIRC6Q9NR09 4857 aa8.3□□□□□ -1.08
VAMP7-206ENST00000488344 DNAH1Q9P2D7 4330 aa8.3□□□□□ -1.08
VAMP7-206ENST00000488344 A0A1W2PS18 150 aa8.29□□□□□ -1.08
VAMP7-206ENST00000488344 DBX1A6NMT0 343 aa8.29□□□□□ -1.08
VAMP7-206ENST00000488344 INS-IGF2F8WCM5 200 aa8.29□□□□□ -1.08
VAMP7-206ENST00000488344 B3GALNT1O75752 331 aa8.29□□□□□ -1.08
VAMP7-206ENST00000488344 TGFBR1P36897 503 aa8.29□□□□□ -1.08
VAMP7-206ENST00000488344 TFPI2P48307 235 aa8.29□□□□□ -1.08
VAMP7-206ENST00000488344 RNASE10Q5GAN6 216 aaKnown RBP8.29□□□□□ -1.08
VAMP7-206ENST00000488344 ZNF600Q6ZNG1 722 aa8.29□□□□□ -1.08
VAMP7-206ENST00000488344 TCF24Q7RTU0 167 aa8.29□□□□□ -1.08
VAMP7-206ENST00000488344 APRG1Q8IVJ8 170 aa8.29□□□□□ -1.08
VAMP7-206ENST00000488344 ARRDC1Q8N5I2 433 aa8.29□□□□□ -1.08
VAMP7-206ENST00000488344 C15orf40Q8WUR7 153 aa8.29□□□□□ -1.08
VAMP7-206ENST00000488344 AP3S1Q92572 193 aa8.29□□□□□ -1.08
VAMP7-206ENST00000488344 NARS2Q96I59 477 aaKnown RBP8.29□□□□□ -1.08
VAMP7-206ENST00000488344 RARRES2Q99969 163 aa8.29□□□□□ -1.08
VAMP7-206ENST00000488344 ENY2Q9NPA8 101 aa8.29□□□□□ -1.08
VAMP7-206ENST00000488344 IGKV3-7A0A075B6H7 116 aa8.28□□□□□ -1.08
VAMP7-206ENST00000488344 ST8SIA3O43173 380 aa8.28□□□□□ -1.08
VAMP7-206ENST00000488344 IFNA17P01571 189 aa8.28□□□□□ -1.08
VAMP7-206ENST00000488344 IFNA4P05014 189 aa8.28□□□□□ -1.08
VAMP7-206ENST00000488344 HOXA1P49639 335 aaPredicted RBP8.28□□□□□ -1.08
VAMP7-206ENST00000488344 RORCP51449 518 aa8.28□□□□□ -1.08
VAMP7-206ENST00000488344 TMEM41BQ5BJD5 291 aa8.28□□□□□ -1.08
VAMP7-206ENST00000488344 FAM90A2PQ658T7 463 aa8.28□□□□□ -1.08
VAMP7-206ENST00000488344 CCDC71LQ8N9Z2 235 aa8.28□□□□□ -1.08
VAMP7-206ENST00000488344 ZFAND1Q8TCF1 268 aa8.28□□□□□ -1.08
VAMP7-206ENST00000488344 PHLDA1Q8WV24 401 aaPredicted RBP8.28□□□□□ -1.08
VAMP7-206ENST00000488344 RRNAD1Q96FB5 475 aaKnown RBP8.28□□□□□ -1.08
VAMP7-206ENST00000488344 VSIRQ9H7M9 311 aa8.28□□□□□ -1.08
VAMP7-206ENST00000488344 IGHV3-49A0A0A0MS15 119 aa8.27□□□□□ -1.09
VAMP7-206ENST00000488344 FAM25AB3EWG3 89 aa8.27□□□□□ -1.09
VAMP7-206ENST00000488344 FAM25CB3EWG5 89 aa8.27□□□□□ -1.09
VAMP7-206ENST00000488344 FAM25GB3EWG6 89 aa8.27□□□□□ -1.09
VAMP7-206ENST00000488344 IGKV1-39P01597 117 aa8.27□□□□□ -1.09
VAMP7-206ENST00000488344 IGKV1D-39P04432 117 aa8.27□□□□□ -1.09
VAMP7-206ENST00000488344 EIF2B2P49770 351 aaKnown RBP8.27□□□□□ -1.09
VAMP7-206ENST00000488344 PIGPP57054 158 aa8.27□□□□□ -1.09
VAMP7-206ENST00000488344 TCTAP57738 103 aa8.27□□□□□ -1.09
VAMP7-206ENST00000488344 RPL11P62913 178 aaKnown RBP8.27□□□□□ -1.09
VAMP7-206ENST00000488344 EWSR1Q01844 656 aaKnown RBP eCLIP8.27□□□□□ -1.09
VAMP7-206ENST00000488344 RBMS2Q15434 407 aaKnown RBP8.27□□□□□ -1.09
VAMP7-206ENST00000488344 TOMM20LQ6UXN7 152 aa8.27□□□□□ -1.09
VAMP7-206ENST00000488344 RNASE11Q8TAA1 199 aaKnown RBP8.27□□□□□ -1.09
VAMP7-206ENST00000488344 COPZ2Q9P299 210 aa8.27□□□□□ -1.09
VAMP7-206ENST00000488344 PUS1Q9Y606 427 aaKnown RBP eCLIP8.27□□□□□ -1.09
VAMP7-206ENST00000488344 EPPK1P58107 5090 aaKnown RBP8.27□□□□□ -1.09
VAMP7-206ENST00000488344 C3orf85A0A1B0GTC6 90 aa8.26□□□□□ -1.09
VAMP7-206ENST00000488344 RPS10-NUDT3A0A1W2PQS6 291 aa8.26□□□□□ -1.09
VAMP7-206ENST00000488344 M0QYG6 137 aa8.26□□□□□ -1.09
VAMP7-206ENST00000488344 CA1P00915 261 aaPredicted RBP8.26□□□□□ -1.09
VAMP7-206ENST00000488344 ELK1P19419 428 aa8.26□□□□□ -1.09
VAMP7-206ENST00000488344 NPPCP23582 126 aa8.26□□□□□ -1.09
VAMP7-206ENST00000488344 TMEM187Q14656 261 aa8.26□□□□□ -1.09
VAMP7-206ENST00000488344 TRIM16LQ309B1 348 aa8.26□□□□□ -1.09
VAMP7-206ENST00000488344 LGALS9CQ6DKI2 356 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms