RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 SFTPA2Q8IWL1 248 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 SFTPA1Q8IWL2 248 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 GCSAMQ8N6F7 178 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 OR4X2Q8NGF9 303 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 OR2T6Q8NHC8 308 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 LRRC29Q8WV35 223 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 TMEM54Q969K7 222 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 CLDN23Q96B33 292 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 PERPQ96FX8 193 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 ZC2HC1AQ96GY0 325 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 OXGR1Q96P68 337 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 NUDT22Q9BRQ3 303 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 GGTLC1Q9BX51 225 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 HEYLQ9NQ87 328 aaPredicted RBP3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 HCFC1R1Q9NWW0 138 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 COPS7AQ9UBW8 275 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 SLC25A10Q9UBX3 287 aaPredicted RBP3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 TRAPPC2LQ9UL33 140 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 LOXL2Q9Y4K0 774 aa3.89□□□□□ -1.79
CDC42BPA-213ENST00000488131 hCG_38984A0A1B0GV85 526 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 KRTAP23-1A1A580 65 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 C15orf62A8K5M9 175 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 F8W1H4 67 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 NPIPA3F8WFD2 350 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 SLC25A17O43808 307 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 CFIP05156 583 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 HNRNPA1P09651 372 aaKnown RBP eCLIP3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 LINC00271P0C7V0 271 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 GATA3P23771 443 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 CTGFP29279 349 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 RPL8P62917 257 aaKnown RBP3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 SRSF6Q13247 344 aaKnown RBP3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 DEFB110Q30KQ9 67 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 SPATA46Q5T0L3 261 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 IBA57Q5T440 356 aaKnown RBP3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 PRAMEF5Q5TYX0 476 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 GDF5OSQ5U4N7 250 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 PRAMEF6Q5VXH4 476 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 INO80CQ6PI98 192 aaPredicted RBP3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 ADAMTSL5Q6ZMM2 481 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 MOB1BQ7L9L4 216 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 OOSP2Q86WS3 158 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 BOD1L2Q8IYS8 172 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 FGFRL1Q8N441 504 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 TTC9CQ8N5M4 171 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 ZNF611Q8N823 705 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 TEX45Q8NA69 505 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 GPR82Q96P67 336 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 MAP1LC3CQ9BXW4 147 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 RNASE7Q9H1E1 156 aaKnown RBP3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 DEC1Q9P2X7 70 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 HSPB8Q9UJY1 196 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 ARHGAP21Q5T5U3 1957 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 PCDH15Q96QU1 1955 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 C2orf16Q68DN1 1984 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 IGLV3-32A0A0A0MS00 114 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 A0A1W2PRE2 83 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 TMEM150CB9EJG8 249 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 PRSS46E5RG02 174 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 CCL16O15467 120 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 TLX3O43711 291 aaPredicted RBP3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 SYNGR3O43761 229 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 ZIC3O60481 467 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 ZG16O60844 167 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 NEURL1O76050 574 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 CLDN14O95500 239 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 CXCL10P02778 98 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 CT45A6P0DMU7 189 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 CT45A5P0DMU8 189 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 CT45A7P0DMV0 189 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 TCL1AP56279 114 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 LOXL3P58215 753 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 RPL24P83731 157 aaKnown RBP3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 C17orf67Q0P5P2 114 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 EIF4EBP1Q13541 118 aaPredicted RBP3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 FXYD3Q14802 87 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 CT45A1Q5HYN5 189 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 TIMM23BQ5SRD1 257 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 PQLC2Q6ZP29 291 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 LINC00173Q6ZV60 143 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 DOLPP1Q86YN1 238 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 WDR31Q8NA23 367 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 CT45A3Q8NHU0 189 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 NEU4Q8WWR8 484 aaPredicted RBP3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 MGST2Q99735 147 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 VGLL1Q99990 258 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 HRASLS2Q9NWW9 162 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 RABAC1Q9UI14 185 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 ERG28Q9UKR5 140 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 PSG8Q9UQ74 426 aa3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 LSM4Q9Y4Z0 139 aaKnown RBP3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 SOX21Q9Y651 276 aaPredicted RBP3.88□□□□□ -1.79
CDC42BPA-213ENST00000488131 CEP350Q5VT06 3117 aa3.87□□□□□ -1.79
CDC42BPA-213ENST00000488131 LTBP2Q14767 1821 aa3.87□□□□□ -1.79
CDC42BPA-213ENST00000488131 SPAG17Q6Q759 2223 aa3.87□□□□□ -1.79
CDC42BPA-213ENST00000488131 HELTA6NFD8 242 aa3.87□□□□□ -1.79
CDC42BPA-213ENST00000488131 C2CD4DB7Z1M9 353 aa3.87□□□□□ -1.79
CDC42BPA-213ENST00000488131 EFNA2O43921 213 aa3.87□□□□□ -1.79
CDC42BPA-213ENST00000488131 SPINK4O60575 86 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms