RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 GDF15Q99988 308 aa12.85□□□□□ -0.35
PKD1-220ENST00000487932 LINC00312Q9Y6C7 94 aa12.85□□□□□ -0.35
PKD1-220ENST00000487932 KLRD1Q13241 179 aa12.85□□□□□ -0.35
PKD1-220ENST00000487932 SHANK3Q9BYB0 1731 aa12.85□□□□□ -0.35
PKD1-220ENST00000487932 RPL32P62910 135 aaKnown RBP12.85□□□□□ -0.35
PKD1-220ENST00000487932 C1orf100Q5SVJ3 147 aa12.85□□□□□ -0.35
PKD1-220ENST00000487932 SLC25A2Q9BXI2 301 aa12.85□□□□□ -0.35
PKD1-220ENST00000487932 PAX8Q06710 450 aa12.85□□□□□ -0.35
PKD1-220ENST00000487932 IL36BQ9NZH7 164 aa12.85□□□□□ -0.35
PKD1-220ENST00000487932 PEF1Q9UBV8 284 aaKnown RBP12.85□□□□□ -0.35
PKD1-220ENST00000487932 TRGV11A0A075B6L2 103 aa12.85□□□□□ -0.35
PKD1-220ENST00000487932 TRBV5-7A0A0A0MS05 114 aa12.85□□□□□ -0.35
PKD1-220ENST00000487932 FABP5P3A8MUU1 101 aa12.85□□□□□ -0.35
PKD1-220ENST00000487932 CGB3P0DN86 165 aa12.85□□□□□ -0.35
PKD1-220ENST00000487932 ZXDCQ2QGD7 858 aaPredicted RBP12.85□□□□□ -0.35
PKD1-220ENST00000487932 SLC25A38Q96DW6 304 aa12.85□□□□□ -0.35
PKD1-220ENST00000487932 BRD3OSQ6XYD6 125 aa12.84□□□□□ -0.35
PKD1-220ENST00000487932 SIGLEC15Q6ZMC9 328 aa12.84□□□□□ -0.35
PKD1-220ENST00000487932 LAMTOR3Q9UHA4 124 aa12.84□□□□□ -0.35
PKD1-220ENST00000487932 OTOFQ9HC10 1997 aa12.84□□□□□ -0.35
PKD1-220ENST00000487932 GGTLC3B5MD39 225 aa12.84□□□□□ -0.35
PKD1-220ENST00000487932 F8WEM9 126 aa12.84□□□□□ -0.35
PKD1-220ENST00000487932 NAT1P18440 290 aa12.84□□□□□ -0.35
PKD1-220ENST00000487932 ACTL10Q5JWF8 245 aa12.84□□□□□ -0.35
PKD1-220ENST00000487932 FAM166AQ6J272 317 aa12.84□□□□□ -0.35
PKD1-220ENST00000487932 VMO1Q7Z5L0 202 aa12.84□□□□□ -0.35
PKD1-220ENST00000487932 HIGD1CA8MV81 97 aa12.84□□□□□ -0.35
PKD1-220ENST00000487932 TIMM23O14925 209 aa12.84□□□□□ -0.35
PKD1-220ENST00000487932 MYO16Q9Y6X6 1858 aa12.84□□□□□ -0.35
PKD1-220ENST00000487932 SCN7AQ01118 1682 aa12.84□□□□□ -0.35
PKD1-220ENST00000487932 COQ2Q96H96 371 aa12.84□□□□□ -0.35
PKD1-220ENST00000487932 RNASE7Q9H1E1 156 aaKnown RBP12.84□□□□□ -0.35
PKD1-220ENST00000487932 SVILO95425 2214 aa12.84□□□□□ -0.35
PKD1-220ENST00000487932 RP1P56715 2156 aa12.83□□□□□ -0.35
PKD1-220ENST00000487932 GCM2O75603 506 aaPredicted RBP12.83□□□□□ -0.35
PKD1-220ENST00000487932 IGHMP01871 453 aa12.83□□□□□ -0.36
PKD1-220ENST00000487932 DANCRP0C864 163 aa12.83□□□□□ -0.36
PKD1-220ENST00000487932 PAX4O43316 350 aa12.83□□□□□ -0.36
PKD1-220ENST00000487932 CIARTQ8N365 385 aaPredicted RBP12.83□□□□□ -0.36
PKD1-220ENST00000487932 CHTOPQ9Y3Y2 248 aaKnown RBP12.83□□□□□ -0.36
PKD1-220ENST00000487932 LURAP1LQ8IV03 231 aa12.83□□□□□ -0.36
PKD1-220ENST00000487932 ZNF837Q96EG3 531 aaPredicted RBP12.83□□□□□ -0.36
PKD1-220ENST00000487932 A0A0G2JK05 382 aa12.83□□□□□ -0.36
PKD1-220ENST00000487932 A0A1B0GV90 55 aa12.83□□□□□ -0.36
PKD1-220ENST00000487932 A0A1W2PR77 199 aa12.83□□□□□ -0.36
PKD1-220ENST00000487932 LCNL1Q6ZST4 164 aa12.83□□□□□ -0.36
PKD1-220ENST00000487932 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.83□□□□□ -0.36
PKD1-220ENST00000487932 IMMP1LQ96LU5 166 aa12.83□□□□□ -0.36
PKD1-220ENST00000487932 TMEM133Q9H2Q1 129 aa12.83□□□□□ -0.36
PKD1-220ENST00000487932 COL22A1Q8NFW1 1626 aaPredicted RBP12.83□□□□□ -0.36
PKD1-220ENST00000487932 ZNF708P17019 499 aa12.82□□□□□ -0.36
PKD1-220ENST00000487932 SRSF6Q13247 344 aaKnown RBP12.82□□□□□ -0.36
PKD1-220ENST00000487932 RNF125Q96EQ8 232 aa12.82□□□□□ -0.36
PKD1-220ENST00000487932 CASP8AP2Q9UKL3 1982 aa12.82□□□□□ -0.36
PKD1-220ENST00000487932 AKAP11Q9UKA4 1901 aa12.82□□□□□ -0.36
PKD1-220ENST00000487932 HIST1H4AP62805 103 aaKnown RBP12.82□□□□□ -0.36
PKD1-220ENST00000487932 OTORQ9NRC9 128 aa12.82□□□□□ -0.36
PKD1-220ENST00000487932 SPCS1Q9Y6A9 102 aa12.82□□□□□ -0.36
PKD1-220ENST00000487932 ZNF646O15015 1829 aaPredicted RBP12.82□□□□□ -0.36
PKD1-220ENST00000487932 IGKV1D-43A0A0B4J1Z2 117 aa12.82□□□□□ -0.36
PKD1-220ENST00000487932 PIN1P1O15428 100 aa12.82□□□□□ -0.36
PKD1-220ENST00000487932 GZMBP10144 247 aa12.82□□□□□ -0.36
PKD1-220ENST00000487932 DDTP30046 118 aa12.82□□□□□ -0.36
PKD1-220ENST00000487932 PRR31Q5SQ13 230 aa12.82□□□□□ -0.36
PKD1-220ENST00000487932 KLHL30-AS1Q8NEE0 82 aa12.82□□□□□ -0.36
PKD1-220ENST00000487932 TMEM8BA6NDV4 472 aa12.82□□□□□ -0.36
PKD1-220ENST00000487932 TOMM40O96008 361 aa12.82□□□□□ -0.36
PKD1-220ENST00000487932 TRAV41A0A0B4J266 112 aa12.82□□□□□ -0.36
PKD1-220ENST00000487932 SRSF1Q07955 248 aaKnown RBP eCLIP12.82□□□□□ -0.366e-10■■□□□ 11.7
PKD1-220ENST00000487932 SCN8AQ9UQD0 1980 aa12.82□□□□□ -0.36
PKD1-220ENST00000487932 PLXNB2O15031 1838 aa12.81□□□□□ -0.36
PKD1-220ENST00000487932 PYYP10082 97 aa12.81□□□□□ -0.36
PKD1-220ENST00000487932 RCC1LQ96I51 464 aaKnown RBP12.81□□□□□ -0.36
PKD1-220ENST00000487932 DOCK5Q9H7D0 1870 aa12.81□□□□□ -0.36
PKD1-220ENST00000487932 LTBP4Q8N2S1 1624 aa12.81□□□□□ -0.36
PKD1-220ENST00000487932 CGB7P0DN87 165 aa12.81□□□□□ -0.36
PKD1-220ENST00000487932 DMRTA1Q5VZB9 504 aa12.81□□□□□ -0.36
PKD1-220ENST00000487932 ZNF48Q96MX3 618 aaPredicted RBP12.81□□□□□ -0.36
PKD1-220ENST00000487932 ASCL2Q99929 193 aa12.81□□□□□ -0.36
PKD1-220ENST00000487932 RBM38Q9H0Z9 239 aaKnown RBP12.81□□□□□ -0.36
PKD1-220ENST00000487932 RREB1Q92766 1687 aa12.81□□□□□ -0.36
PKD1-220ENST00000487932 NAPSAO96009 420 aa12.81□□□□□ -0.36
PKD1-220ENST00000487932 RPL15P61313 204 aaKnown RBP12.81□□□□□ -0.36
PKD1-220ENST00000487932 NDPQ00604 133 aa12.81□□□□□ -0.36
PKD1-220ENST00000487932 SLC50A1Q9BRV3 221 aa12.81□□□□□ -0.36
PKD1-220ENST00000487932 NHP2Q9NX24 153 aaKnown RBP12.81□□□□□ -0.36
PKD1-220ENST00000487932 H2BFSP57053 126 aa12.81□□□□□ -0.36
PKD1-220ENST00000487932 MYO5AQ9Y4I1 1855 aaKnown RBP12.8□□□□□ -0.36
PKD1-220ENST00000487932 CD300EQ496F6 205 aaPredicted RBP12.8□□□□□ -0.36
PKD1-220ENST00000487932 ZNF625Q96I27 306 aaPredicted RBP12.8□□□□□ -0.36
PKD1-220ENST00000487932 IGKV2-40A0A087WW87 121 aaPredicted RBP12.8□□□□□ -0.36
PKD1-220ENST00000487932 IGKV2D-40P01614 121 aaPredicted RBP12.8□□□□□ -0.36
PKD1-220ENST00000487932 CYSLTR1Q9Y271 337 aa12.8□□□□□ -0.36
PKD1-220ENST00000487932 TRAV8-4A0A0B4J246 113 aa12.8□□□□□ -0.36
PKD1-220ENST00000487932 UCP3P55916 312 aa12.8□□□□□ -0.36
PKD1-220ENST00000487932 ZNF474Q6S9Z5 364 aaPredicted RBP12.8□□□□□ -0.36
PKD1-220ENST00000487932 PLPPR1Q8TBJ4 325 aa12.8□□□□□ -0.36
PKD1-220ENST00000487932 PPP1R3EQ9H7J1 279 aa12.8□□□□□ -0.36
PKD1-220ENST00000487932 PIKFYVEQ9Y2I7 2098 aa12.8□□□□□ -0.36
PKD1-220ENST00000487932 IQCF6A8MYZ5 107 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms