RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 UNQ9165/PRO28630Q6UXU0 137 aa12.91□□□□□ -0.34
HMG20B-212ENST00000487894 TMED4Q7Z7H5 227 aa12.91□□□□□ -0.34
HMG20B-212ENST00000487894 CACNG8Q8WXS5 425 aa12.91□□□□□ -0.34
HMG20B-212ENST00000487894 SLC25A21Q9BQT8 299 aaPredicted RBP12.91□□□□□ -0.34
HMG20B-212ENST00000487894 ZNF436Q9C0F3 470 aaPredicted RBP12.91□□□□□ -0.34
HMG20B-212ENST00000487894 SMAD5-AS1Q9Y6J3 95 aa12.91□□□□□ -0.34
HMG20B-212ENST00000487894 IGHV3-35A0A0C4DH35 117 aa12.9□□□□□ -0.34
HMG20B-212ENST00000487894 RNASE2P10153 161 aaKnown RBP12.9□□□□□ -0.34
HMG20B-212ENST00000487894 LCN12Q6JVE5 192 aa12.9□□□□□ -0.34
HMG20B-212ENST00000487894 SPSB3Q6PJ21 355 aa12.9□□□□□ -0.34
HMG20B-212ENST00000487894 UBAC2Q8NBM4 344 aa12.9□□□□□ -0.34
HMG20B-212ENST00000487894 OR2K2Q8NGT1 345 aa12.9□□□□□ -0.34
HMG20B-212ENST00000487894 OR52E5Q8NH55 327 aa12.9□□□□□ -0.34
HMG20B-212ENST00000487894 CHRDL1Q9BU40 450 aa12.9□□□□□ -0.34
HMG20B-212ENST00000487894 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.9□□□□□ -0.34
HMG20B-212ENST00000487894 A0A0B4J2A0 478 aa12.89□□□□□ -0.35
HMG20B-212ENST00000487894 ZNF320A2RRD8 509 aa12.89□□□□□ -0.35
HMG20B-212ENST00000487894 MT-CO2P00403 227 aa12.89□□□□□ -0.35
HMG20B-212ENST00000487894 ANXA3P12429 323 aa12.89□□□□□ -0.35
HMG20B-212ENST00000487894 ADMP35318 185 aa12.89□□□□□ -0.35
HMG20B-212ENST00000487894 SNCAP37840 140 aa12.89□□□□□ -0.35
HMG20B-212ENST00000487894 INPP1P49441 399 aa12.89□□□□□ -0.35
HMG20B-212ENST00000487894 CCR6P51684 374 aa12.89□□□□□ -0.35
HMG20B-212ENST00000487894 SPCS3P61009 180 aa12.89□□□□□ -0.35
HMG20B-212ENST00000487894 CD300EQ496F6 205 aaPredicted RBP12.89□□□□□ -0.35
HMG20B-212ENST00000487894 Q56UQ5 140 aa12.89□□□□□ -0.35
HMG20B-212ENST00000487894 TMEM128Q5BJH2 165 aa12.89□□□□□ -0.35
HMG20B-212ENST00000487894 NMSQ5H8A3 153 aa12.89□□□□□ -0.35
HMG20B-212ENST00000487894 PVRIGQ6DKI7 326 aa12.89□□□□□ -0.35
HMG20B-212ENST00000487894 LYZL2Q7Z4W2 148 aa12.89□□□□□ -0.35
HMG20B-212ENST00000487894 Q8N1Y9 231 aa12.89□□□□□ -0.35
HMG20B-212ENST00000487894 DYNLRB2Q8TF09 96 aa12.89□□□□□ -0.35
HMG20B-212ENST00000487894 TMEM190Q8WZ59 177 aa12.89□□□□□ -0.35
HMG20B-212ENST00000487894 ZNF414Q96IQ9 312 aa12.89□□□□□ -0.35
HMG20B-212ENST00000487894 SHPKQ9UHJ6 478 aa12.89□□□□□ -0.35
HMG20B-212ENST00000487894 NAP1L6A6NFF2 107 aa12.88□□□□□ -0.35
HMG20B-212ENST00000487894 SULT1A3P0DMM9 295 aa12.88□□□□□ -0.35
HMG20B-212ENST00000487894 SULT1A4P0DMN0 295 aa12.88□□□□□ -0.35
HMG20B-212ENST00000487894 IL7P13232 177 aa12.88□□□□□ -0.35
HMG20B-212ENST00000487894 CBLN1P23435 193 aa12.88□□□□□ -0.35
HMG20B-212ENST00000487894 FCGR2BP31994 310 aaPredicted RBP12.88□□□□□ -0.35
HMG20B-212ENST00000487894 SRPXP78539 464 aa12.88□□□□□ -0.35
HMG20B-212ENST00000487894 RBMS2Q15434 407 aaKnown RBP12.88□□□□□ -0.35
HMG20B-212ENST00000487894 DEFB114Q30KQ6 69 aa12.88□□□□□ -0.35
HMG20B-212ENST00000487894 BSXQ3C1V8 233 aa12.88□□□□□ -0.35
HMG20B-212ENST00000487894 C11orf87Q6NUJ2 197 aa12.88□□□□□ -0.35
HMG20B-212ENST00000487894 LGI3Q8N145 548 aa12.88□□□□□ -0.35
HMG20B-212ENST00000487894 PINX1Q96BK5 328 aaKnown RBP12.88□□□□□ -0.35
HMG20B-212ENST00000487894 ENY2Q9NPA8 101 aa12.88□□□□□ -0.35
HMG20B-212ENST00000487894 IGHV3-48P01763 117 aa12.87□□□□□ -0.35
HMG20B-212ENST00000487894 CTSGP08311 255 aa12.87□□□□□ -0.35
HMG20B-212ENST00000487894 BTCP35070 178 aa12.87□□□□□ -0.35
HMG20B-212ENST00000487894 MFAP4P55083 255 aa12.87□□□□□ -0.35
HMG20B-212ENST00000487894 ELLP55199 621 aaPredicted RBP12.87□□□□□ -0.35
HMG20B-212ENST00000487894 TM4SF20Q53R12 229 aa12.87□□□□□ -0.35
HMG20B-212ENST00000487894 CENPSQ8N2Z9 138 aa12.87□□□□□ -0.35
HMG20B-212ENST00000487894 TXN2Q99757 166 aa12.87□□□□□ -0.35
HMG20B-212ENST00000487894 PALMDQ9NP74 551 aa12.87□□□□□ -0.35
HMG20B-212ENST00000487894 TECRQ9NZ01 308 aaKnown RBP12.87□□□□□ -0.35
HMG20B-212ENST00000487894 MLXQ9UH92 298 aa12.87□□□□□ -0.35
HMG20B-212ENST00000487894 TMA7Q9Y2S6 64 aaKnown RBP12.87□□□□□ -0.35
HMG20B-212ENST00000487894 HUWE1Q7Z6Z7 4374 aaKnown RBP12.87□□□□□ -0.35
HMG20B-212ENST00000487894 NDUFA4O00483 81 aa12.86□□□□□ -0.35
HMG20B-212ENST00000487894 NXPH3O95157 252 aa12.86□□□□□ -0.35
HMG20B-212ENST00000487894 C8orf88P0DMB2 117 aa12.86□□□□□ -0.35
HMG20B-212ENST00000487894 SUB1P53999 127 aaKnown RBP eCLIP12.86□□□□□ -0.35
HMG20B-212ENST00000487894 PPP1R1AQ13522 171 aa12.86□□□□□ -0.35
HMG20B-212ENST00000487894 ANKRD55Q3KP44 614 aa12.86□□□□□ -0.35
HMG20B-212ENST00000487894 UXS1Q8NBZ7 420 aa12.86□□□□□ -0.35
HMG20B-212ENST00000487894 GAR1Q9NY12 217 aaKnown RBP12.86□□□□□ -0.35
HMG20B-212ENST00000487894 UFC1Q9Y3C8 167 aa12.86□□□□□ -0.35
HMG20B-212ENST00000487894 SELENOKQ9Y6D0 94 aa12.86□□□□□ -0.35
HMG20B-212ENST00000487894 LINC00854A0A1B0GVQ3 168 aa12.85□□□□□ -0.35
HMG20B-212ENST00000487894 DUXBA0A1W2PPF3 345 aa12.85□□□□□ -0.35
HMG20B-212ENST00000487894 A6NHS1 94 aa12.85□□□□□ -0.35
HMG20B-212ENST00000487894 ZNF785A8K8V0 405 aa12.85□□□□□ -0.35
HMG20B-212ENST00000487894 CORTO00230 105 aa12.85□□□□□ -0.35
HMG20B-212ENST00000487894 NDUFB6O95139 128 aa12.85□□□□□ -0.35
HMG20B-212ENST00000487894 SFT2D2O95562 160 aa12.85□□□□□ -0.35
HMG20B-212ENST00000487894 FRMD6-AS1P0C7T7 363 aa12.85□□□□□ -0.35
HMG20B-212ENST00000487894 SMCO1Q147U7 214 aa12.85□□□□□ -0.35
HMG20B-212ENST00000487894 BTNL8Q6UX41 500 aa12.85□□□□□ -0.35
HMG20B-212ENST00000487894 LRTM2Q8N967 370 aa12.85□□□□□ -0.35
HMG20B-212ENST00000487894 MARC2Q969Z3 335 aa12.85□□□□□ -0.35
HMG20B-212ENST00000487894 C7orf50Q9BRJ6 194 aaKnown RBP12.85□□□□□ -0.35
HMG20B-212ENST00000487894 FNDC4Q9H6D8 234 aaPredicted RBP12.85□□□□□ -0.35
HMG20B-212ENST00000487894 HEYLQ9NQ87 328 aaPredicted RBP12.85□□□□□ -0.35
HMG20B-212ENST00000487894 CEBPZOSA8MTT3 80 aa12.84□□□□□ -0.35
HMG20B-212ENST00000487894 NUPL2O15504 423 aaKnown RBP12.84□□□□□ -0.35
HMG20B-212ENST00000487894 IGHV4-30-4P0DP06 118 aa12.84□□□□□ -0.35
HMG20B-212ENST00000487894 HTR2BP41595 481 aa12.84□□□□□ -0.35
HMG20B-212ENST00000487894 UBE2MP61081 183 aaKnown RBP12.84□□□□□ -0.35
HMG20B-212ENST00000487894 TNFRSF9Q07011 255 aa12.84□□□□□ -0.35
HMG20B-212ENST00000487894 TMEM61Q8N0U2 210 aa12.84□□□□□ -0.35
HMG20B-212ENST00000487894 WDR89Q96FK6 387 aaPredicted RBP12.84□□□□□ -0.35
HMG20B-212ENST00000487894 ASCL2Q99929 193 aa12.84□□□□□ -0.35
HMG20B-212ENST00000487894 DAZ1Q9NQZ3 744 aaKnown RBP12.84□□□□□ -0.35
HMG20B-212ENST00000487894 MRPL27Q9P0M9 148 aaKnown RBP12.84□□□□□ -0.35
HMG20B-212ENST00000487894 HSPB7Q9UBY9 170 aa12.84□□□□□ -0.35
HMG20B-212ENST00000487894 TENM3Q9P273 2699 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms