RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 LYRM7Q5U5X0 104 aa1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 LGALS9CQ6DKI2 356 aa1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 RPL22L1Q6P5R6 122 aaKnown RBP1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 DCUN1D2Q6PH85 259 aa1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 Q6Q795 121 aa1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 SSX8Q7RTT4 187 aa1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 LHFPL1Q86WI0 220 aa1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 FAM24BQ8N5W8 94 aa1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 C12orf29Q8N999 325 aa1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 CNEP1R1Q8N9A8 125 aa1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 TMEM35BQ8NCS4 154 aa1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 OR13C4Q8NGS5 318 aa1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 OR10K1Q8NGX5 313 aa1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 SLC25A40Q8TBP6 338 aa1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 SLC7A6Q92536 515 aa1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 FGF13Q92913 245 aa1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 TOMM6Q96B49 74 aa1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 MALSU1Q96EH3 234 aa1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 C2orf50Q96LR7 162 aa1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 ERMAPQ96PL5 475 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 MAP1LC3BQ9GZQ8 125 aa1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 C11orf68Q9H3H3 251 aaKnown RBP1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 EFCAB1Q9HAE3 211 aa1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 SS18L2Q9UHA2 77 aa1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 HSPB11Q9Y547 144 aa1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 COL18A1P39060 1754 aa1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 NUP160Q12769 1436 aa1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 MIA2Q96PC5 1412 aa1.49□□□□□ -2.17
HMGB1P36-201ENST00000487709 TRBV19A0A075B6N1 114 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 TRAV41A0A0B4J266 112 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 A0A1W2PQD3 144 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 E7EQ34 232 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 J3QQQ9 107 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 MFSD11O43934 449 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 NPYP01303 97 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 APOA2P02652 100 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 PRM2P04554 102 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 NBEAP1P0C6P0 100 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 HIST1H2BOP23527 126 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 HIST1H2BBP33778 126 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 G6PCP35575 357 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 XCL1P47992 114 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 HIST1H2BDP58876 126 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 KRTAP12-1P59990 96 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 RPL26P61254 145 aaKnown RBP1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 HIST1H4AP62805 103 aaKnown RBP1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 HIST1H2BCP62807 126 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 CCL20P78556 96 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 ZNF90Q03938 601 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 SS18Q15532 418 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 HIST2H2BEQ16778 126 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 LGALS9BQ3B8N2 356 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 SPATA12Q7Z6I5 190 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 SLC35E3Q7Z769 313 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 PACRGLQ8N7B6 248 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 GRPEL2Q8TAA5 225 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 HIST1H2BHQ93079 126 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 HIST1H2BNQ99877 126 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 HIST1H2BMQ99879 126 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 IMUPQ9GZP8 106 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 C6orf62Q9GZU0 229 aaPredicted RBP1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 CHST6Q9GZX3 395 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 PBOV1Q9GZY1 135 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 XAGE1AQ9HD64 81 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 MED29Q9NX70 200 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 TAS2R7Q9NYW3 318 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 RPL26L1Q9UNX3 145 aaKnown RBP1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 FUT9Q9Y231 359 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 CYSLTR1Q9Y271 337 aa1.48□□□□□ -2.17
HMGB1P36-201ENST00000487709 ITGB4P16144 1822 aa1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 SLIT2O94813 1529 aa1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 TRPM3Q9HCF6 1732 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 TRAV38-1A0A0B4J264 116 aa1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 IRGMA1A4Y4 181 aa1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 ORC5O43913 435 aa1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 BANF1O75531 89 aa1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 OR2J2O76002 312 aa1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 C1QAP02745 245 aa1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 CCL3P10147 92 aa1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 SCGB1A1P11684 91 aa1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 CASP1P29466 404 aa1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 ATP5G3P48201 142 aa1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 RBM11P57052 281 aaKnown RBP1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 TPI1P60174 286 aa1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 SMCO1Q147U7 214 aa1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 TMEM78Q5T7P6 136 aa1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 AADACL3Q5VUY0 350 aa1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 SAMD13Q5VXD3 122 aa1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 Q6ZTI0 123 aa1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 C12orf45Q8N5I9 185 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 OR13D1Q8NGV5 346 aa1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 RNASE6Q93091 150 aaKnown RBP1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 LYSMD1Q96S90 227 aa1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 SERPINI1Q99574 410 aa1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 CCDC32Q9BV29 185 aa1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 ZNF471Q9BX82 626 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 IL36BQ9NZH7 164 aa1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 LAMTOR3Q9UHA4 124 aa1.47□□□□□ -2.17
HMGB1P36-201ENST00000487709 GINS2Q9Y248 185 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms