RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 APOA1P02647 267 aa9□□□□□ -0.97
VPS16-208ENST00000487461 ELK1P19419 428 aa9□□□□□ -0.97
VPS16-208ENST00000487461 S100GP29377 79 aa9□□□□□ -0.97
VPS16-208ENST00000487461 HSPE1P61604 102 aaKnown RBP9□□□□□ -0.97
VPS16-208ENST00000487461 NCS1P62166 190 aa9□□□□□ -0.97
VPS16-208ENST00000487461 RELQ04864 619 aaPredicted RBP9□□□□□ -0.97
VPS16-208ENST00000487461 ZNF124Q15973 351 aa9□□□□□ -0.97
VPS16-208ENST00000487461 GPR107Q5VW38 600 aa9□□□□□ -0.97
VPS16-208ENST00000487461 FAM90A2PQ658T7 463 aa9□□□□□ -0.97
VPS16-208ENST00000487461 CEMP1Q6PRD7 247 aaPredicted RBP9□□□□□ -0.97
VPS16-208ENST00000487461 MRGPRFQ96AM1 343 aa9□□□□□ -0.97
VPS16-208ENST00000487461 GALNT14Q96FL9 552 aa9□□□□□ -0.97
VPS16-208ENST00000487461 OR10C1Q96KK4 312 aa9□□□□□ -0.97
VPS16-208ENST00000487461 CMTM3Q96MX0 182 aa9□□□□□ -0.97
VPS16-208ENST00000487461 NXF2Q9GZY0 626 aaKnown RBP9□□□□□ -0.97
VPS16-208ENST00000487461 SCPEP1Q9HB40 452 aa9□□□□□ -0.97
VPS16-208ENST00000487461 IGHV3OR16-13A0A075B7E8 117 aa8.99□□□□□ -0.97
VPS16-208ENST00000487461 TRAV14DV4A0A0A6YYC5 116 aa8.99□□□□□ -0.97
VPS16-208ENST00000487461 IGHV3-74A0A0B4J1X5 117 aa8.99□□□□□ -0.97
VPS16-208ENST00000487461 NUPR2A6NF83 97 aa8.99□□□□□ -0.97
VPS16-208ENST00000487461 M0QYG6 137 aa8.99□□□□□ -0.97
VPS16-208ENST00000487461 HPGDSO60760 199 aa8.99□□□□□ -0.97
VPS16-208ENST00000487461 ATF4P18848 351 aaPredicted RBP8.99□□□□□ -0.97
VPS16-208ENST00000487461 RCVRNP35243 200 aa8.99□□□□□ -0.97
VPS16-208ENST00000487461 TFPI2P48307 235 aa8.99□□□□□ -0.97
VPS16-208ENST00000487461 VBP1P61758 197 aa8.99□□□□□ -0.97
VPS16-208ENST00000487461 PRCDQ00LT1 54 aa8.99□□□□□ -0.97
VPS16-208ENST00000487461 IZUMO4Q1ZYL8 232 aa8.99□□□□□ -0.97
VPS16-208ENST00000487461 SPINK9Q5DT21 86 aa8.99□□□□□ -0.97
VPS16-208ENST00000487461 ZNF114Q8NC26 417 aa8.99□□□□□ -0.97
VPS16-208ENST00000487461 FUNDC2Q9BWH2 189 aa8.99□□□□□ -0.97
VPS16-208ENST00000487461 IGKV3-7A0A075B6H7 116 aa8.98□□□□□ -0.97
VPS16-208ENST00000487461 CMC4P56277 68 aaPredicted RBP8.98□□□□□ -0.97
VPS16-208ENST00000487461 ERHP84090 104 aaKnown RBP8.98□□□□□ -0.97
VPS16-208ENST00000487461 LILRB2Q8N423 598 aa8.98□□□□□ -0.97
VPS16-208ENST00000487461 GBGT1Q8N5D6 347 aa8.98□□□□□ -0.97
VPS16-208ENST00000487461 PINX1Q96BK5 328 aaKnown RBP8.98□□□□□ -0.97
VPS16-208ENST00000487461 CSTL1Q9H114 145 aa8.98□□□□□ -0.97
VPS16-208ENST00000487461 A0A0B4J293 547 aa8.97□□□□□ -0.97
VPS16-208ENST00000487461 GNG7O60262 68 aa8.97□□□□□ -0.97
VPS16-208ENST00000487461 IGKV1-5P01602 117 aa8.97□□□□□ -0.97
VPS16-208ENST00000487461 APOHP02749 345 aaPredicted RBP8.97□□□□□ -0.97
VPS16-208ENST00000487461 PI3P19957 117 aa8.97□□□□□ -0.97
VPS16-208ENST00000487461 RND3P61587 244 aa8.97□□□□□ -0.97
VPS16-208ENST00000487461 TOMM20LQ6UXN7 152 aa8.97□□□□□ -0.97
VPS16-208ENST00000487461 C6orf62Q9GZU0 229 aaPredicted RBP8.97□□□□□ -0.97
VPS16-208ENST00000487461 KLK11Q9UBX7 282 aa8.97□□□□□ -0.97
VPS16-208ENST00000487461 A0A1B0GVG6 124 aa8.96□□□□□ -0.98
VPS16-208ENST00000487461 MPTX1A8MV57 137 aa8.96□□□□□ -0.98
VPS16-208ENST00000487461 GABARAPO95166 117 aa8.96□□□□□ -0.98
VPS16-208ENST00000487461 TMEM50AO95807 157 aa8.96□□□□□ -0.98
VPS16-208ENST00000487461 P0C879 139 aa8.96□□□□□ -0.98
VPS16-208ENST00000487461 PGAM2P15259 253 aa8.96□□□□□ -0.98
VPS16-208ENST00000487461 RORCP51449 518 aa8.96□□□□□ -0.98
VPS16-208ENST00000487461 RNASE12Q5GAN4 147 aaKnown RBP8.96□□□□□ -0.98
VPS16-208ENST00000487461 PVRIGQ6DKI7 326 aa8.96□□□□□ -0.98
VPS16-208ENST00000487461 Q6ZNX1 250 aa8.96□□□□□ -0.98
VPS16-208ENST00000487461 TCF24Q7RTU0 167 aa8.96□□□□□ -0.98
VPS16-208ENST00000487461 LHFPL1Q86WI0 220 aa8.96□□□□□ -0.98
VPS16-208ENST00000487461 DUSP18Q8NEJ0 188 aa8.96□□□□□ -0.98
VPS16-208ENST00000487461 ST8SIA2Q92186 375 aa8.96□□□□□ -0.98
VPS16-208ENST00000487461 TP53RKQ96S44 253 aa8.96□□□□□ -0.98
VPS16-208ENST00000487461 KLK5Q9Y337 293 aaPredicted RBP8.96□□□□□ -0.98
VPS16-208ENST00000487461 IGHV3-66A0A0C4DH42 116 aa8.95□□□□□ -0.98
VPS16-208ENST00000487461 FAM25AB3EWG3 89 aa8.95□□□□□ -0.98
VPS16-208ENST00000487461 FAM25CB3EWG5 89 aa8.95□□□□□ -0.98
VPS16-208ENST00000487461 FAM25GB3EWG6 89 aa8.95□□□□□ -0.98
VPS16-208ENST00000487461 INS-IGF2F8WCM5 200 aa8.95□□□□□ -0.98
VPS16-208ENST00000487461 ST8SIA3O43173 380 aa8.95□□□□□ -0.98
VPS16-208ENST00000487461 CD3DP04234 171 aa8.95□□□□□ -0.98
VPS16-208ENST00000487461 PIGPP57054 158 aa8.95□□□□□ -0.98
VPS16-208ENST00000487461 CTF1Q16619 201 aa8.95□□□□□ -0.98
VPS16-208ENST00000487461 MLANAQ16655 118 aa8.95□□□□□ -0.98
VPS16-208ENST00000487461 TMEM217Q8N7C4 229 aa8.95□□□□□ -0.98
VPS16-208ENST00000487461 OR52I2Q8NH67 350 aa8.95□□□□□ -0.98
VPS16-208ENST00000487461 PHLDA1Q8WV24 401 aaPredicted RBP8.95□□□□□ -0.98
VPS16-208ENST00000487461 S100ZQ8WXG8 99 aa8.95□□□□□ -0.98
VPS16-208ENST00000487461 ZNF486Q96H40 463 aaPredicted RBP8.95□□□□□ -0.98
VPS16-208ENST00000487461 RARRES2Q99969 163 aa8.95□□□□□ -0.98
VPS16-208ENST00000487461 NAA50Q9GZZ1 169 aaKnown RBP8.95□□□□□ -0.98
VPS16-208ENST00000487461 VSIRQ9H7M9 311 aa8.95□□□□□ -0.98
VPS16-208ENST00000487461 PUS1Q9Y606 427 aaKnown RBP eCLIP8.95□□□□□ -0.98
VPS16-208ENST00000487461 C3orf85A0A1B0GTC6 90 aa8.94□□□□□ -0.98
VPS16-208ENST00000487461 A0A1B0GU03 582 aa8.94□□□□□ -0.98
VPS16-208ENST00000487461 DFFBO76075 338 aa8.94□□□□□ -0.98
VPS16-208ENST00000487461 IFNA17P01571 189 aa8.94□□□□□ -0.98
VPS16-208ENST00000487461 RNASE2P10153 161 aaKnown RBP8.94□□□□□ -0.98
VPS16-208ENST00000487461 SNCAP37840 140 aa8.94□□□□□ -0.98
VPS16-208ENST00000487461 ETV6P41212 452 aa8.94□□□□□ -0.98
VPS16-208ENST00000487461 NPBWR1P48145 328 aa8.94□□□□□ -0.98
VPS16-208ENST00000487461 PAFAH1B2P68402 229 aa8.94□□□□□ -0.98
VPS16-208ENST00000487461 SP6Q3SY56 376 aa8.94□□□□□ -0.98
VPS16-208ENST00000487461 RNASE10Q5GAN6 216 aaKnown RBP8.94□□□□□ -0.98
VPS16-208ENST00000487461 MZT2AQ6P582 158 aa8.94□□□□□ -0.98
VPS16-208ENST00000487461 ZNF600Q6ZNG1 722 aa8.94□□□□□ -0.98
VPS16-208ENST00000487461 FAM24BQ8N5W8 94 aa8.94□□□□□ -0.98
VPS16-208ENST00000487461 OR4D10Q8NGI6 311 aa8.94□□□□□ -0.98
VPS16-208ENST00000487461 OR11H2Q8NH07 326 aa8.94□□□□□ -0.98
VPS16-208ENST00000487461 GATAD1Q8WUU5 269 aa8.94□□□□□ -0.98
VPS16-208ENST00000487461 GINS3Q9BRX5 216 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms