RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 TRUB1Q8WWH5 349 aaKnown RBP8.2□□□□□ -1.1
ATPAF1-205ENST00000487193 PINX1Q96BK5 328 aaKnown RBP8.2□□□□□ -1.1
ATPAF1-205ENST00000487193 SMIM19Q96E16 107 aa8.2□□□□□ -1.1
ATPAF1-205ENST00000487193 ARL2BPQ9Y2Y0 163 aa8.2□□□□□ -1.1
ATPAF1-205ENST00000487193 AQP12BA6NM10 295 aa8.19□□□□□ -1.1
ATPAF1-205ENST00000487193 SNTNA6NMZ2 147 aa8.19□□□□□ -1.1
ATPAF1-205ENST00000487193 TMEM14DPA8MWL7 114 aa8.19□□□□□ -1.1
ATPAF1-205ENST00000487193 MT-CO2P00403 227 aa8.19□□□□□ -1.1
ATPAF1-205ENST00000487193 M6PRP20645 277 aa8.19□□□□□ -1.1
ATPAF1-205ENST00000487193 EIF2B2P49770 351 aaKnown RBP8.19□□□□□ -1.1
ATPAF1-205ENST00000487193 RASSF2P50749 326 aa8.19□□□□□ -1.1
ATPAF1-205ENST00000487193 QRFPP83859 136 aa8.19□□□□□ -1.1
ATPAF1-205ENST00000487193 KCTD21Q4G0X4 260 aa8.19□□□□□ -1.1
ATPAF1-205ENST00000487193 Q6ZSA8 131 aa8.19□□□□□ -1.1
ATPAF1-205ENST00000487193 SCXQ7RTU7 201 aa8.19□□□□□ -1.1
ATPAF1-205ENST00000487193 SPATA24Q86W54 205 aa8.19□□□□□ -1.1
ATPAF1-205ENST00000487193 AQP12AQ8IXF9 295 aa8.19□□□□□ -1.1
ATPAF1-205ENST00000487193 ZFP41Q8N8Y5 198 aa8.19□□□□□ -1.1
ATPAF1-205ENST00000487193 OR52I1Q8NGK6 324 aa8.19□□□□□ -1.1
ATPAF1-205ENST00000487193 OR1L8Q8NGR8 309 aa8.19□□□□□ -1.1
ATPAF1-205ENST00000487193 NARS2Q96I59 477 aaKnown RBP8.19□□□□□ -1.1
ATPAF1-205ENST00000487193 HSD17B10Q99714 261 aaKnown RBP8.19□□□□□ -1.1
ATPAF1-205ENST00000487193 AIFM2Q9BRQ8 373 aa8.19□□□□□ -1.1
ATPAF1-205ENST00000487193 FCGR3AP08637 254 aa8.18□□□□□ -1.1
ATPAF1-205ENST00000487193 LIMS3P0CW19 117 aa8.18□□□□□ -1.1
ATPAF1-205ENST00000487193 LIMS4P0CW20 117 aa8.18□□□□□ -1.1
ATPAF1-205ENST00000487193 AZU1P20160 251 aa8.18□□□□□ -1.1
ATPAF1-205ENST00000487193 CRYBB3P26998 211 aa8.18□□□□□ -1.1
ATPAF1-205ENST00000487193 NKX2-1P43699 371 aaPredicted RBP8.18□□□□□ -1.1
ATPAF1-205ENST00000487193 PSG9Q00887 426 aa8.18□□□□□ -1.1
ATPAF1-205ENST00000487193 SSX1Q16384 188 aa8.18□□□□□ -1.1
ATPAF1-205ENST00000487193 ACSM3Q53FZ2 586 aa8.18□□□□□ -1.1
ATPAF1-205ENST00000487193 THOC7Q6I9Y2 204 aaKnown RBP8.18□□□□□ -1.1
ATPAF1-205ENST00000487193 DMBX1Q8NFW5 382 aa8.18□□□□□ -1.1
ATPAF1-205ENST00000487193 LSM10Q969L4 123 aaKnown RBP8.18□□□□□ -1.1
ATPAF1-205ENST00000487193 LINC00052Q96N35 136 aa8.18□□□□□ -1.1
ATPAF1-205ENST00000487193 URM1Q9BTM9 101 aaKnown RBP8.18□□□□□ -1.1
ATPAF1-205ENST00000487193 NDUFA4L2Q9NRX3 87 aa8.18□□□□□ -1.1
ATPAF1-205ENST00000487193 IGKV1D-13A0A0B4J2D9 117 aa8.17□□□□□ -1.1
ATPAF1-205ENST00000487193 FOXI3A8MTJ6 420 aaPredicted RBP8.17□□□□□ -1.1
ATPAF1-205ENST00000487193 ZNF701M0R085 212 aaPredicted RBP8.17□□□□□ -1.1
ATPAF1-205ENST00000487193 TNFSF12O43508 249 aa8.17□□□□□ -1.1
ATPAF1-205ENST00000487193 NXPH4O95158 308 aa8.17□□□□□ -1.1
ATPAF1-205ENST00000487193 LALBAP00709 142 aa8.17□□□□□ -1.1
ATPAF1-205ENST00000487193 CDK1P06493 297 aa8.17□□□□□ -1.1
ATPAF1-205ENST00000487193 IGKV1-13P0DP09 117 aa8.17□□□□□ -1.1
ATPAF1-205ENST00000487193 HOXB6P17509 224 aaKnown RBP8.17□□□□□ -1.1
ATPAF1-205ENST00000487193 NFYAP23511 347 aaPredicted RBP8.17□□□□□ -1.1
ATPAF1-205ENST00000487193 AP2S1P53680 142 aaPredicted RBP8.17□□□□□ -1.1
ATPAF1-205ENST00000487193 EIF4EBP1Q13541 118 aaPredicted RBP8.17□□□□□ -1.1
ATPAF1-205ENST00000487193 PLAC9Q5JTB6 97 aa8.17□□□□□ -1.1
ATPAF1-205ENST00000487193 SPAG16Q8N0X2 631 aa8.17□□□□□ -1.1
ATPAF1-205ENST00000487193 FAM89BQ8N5H3 189 aa8.17□□□□□ -1.1
ATPAF1-205ENST00000487193 DERL3Q96Q80 235 aa8.17□□□□□ -1.1
ATPAF1-205ENST00000487193 GABARAPL3Q9BY60 117 aa8.17□□□□□ -1.1
ATPAF1-205ENST00000487193 DCSTAMPQ9H295 470 aa8.17□□□□□ -1.1
ATPAF1-205ENST00000487193 SAV1Q9H4B6 383 aaPredicted RBP8.17□□□□□ -1.1
ATPAF1-205ENST00000487193 TMEM140Q9NV12 185 aa8.17□□□□□ -1.1
ATPAF1-205ENST00000487193 MSRB1Q9NZV6 116 aa8.17□□□□□ -1.1
ATPAF1-205ENST00000487193 PNMA8CA0A1B0GUJ8 204 aa8.16□□□□□ -1.1
ATPAF1-205ENST00000487193 PLAC8L1A1L4L8 177 aa8.16□□□□□ -1.1
ATPAF1-205ENST00000487193 LRCOL1A6NCL2 159 aa8.16□□□□□ -1.1
ATPAF1-205ENST00000487193 SAC3D1A6NKF1 404 aa8.16□□□□□ -1.1
ATPAF1-205ENST00000487193 DBX1A6NMT0 343 aa8.16□□□□□ -1.1
ATPAF1-205ENST00000487193 DIRAS3O95661 229 aa8.16□□□□□ -1.1
ATPAF1-205ENST00000487193 HLA-DQB1P01920 261 aa8.16□□□□□ -1.1
ATPAF1-205ENST00000487193 ETV1P50549 477 aa8.16□□□□□ -1.1
ATPAF1-205ENST00000487193 ODF1Q14990 250 aa8.16□□□□□ -1.1
ATPAF1-205ENST00000487193 Q8N814 137 aa8.16□□□□□ -1.1
ATPAF1-205ENST00000487193 OR1P1Q8NH06 330 aa8.16□□□□□ -1.1
ATPAF1-205ENST00000487193 TMEM230Q96A57 120 aa8.16□□□□□ -1.1
ATPAF1-205ENST00000487193 DAZAP1Q96EP5 407 aaKnown RBP8.16□□□□□ -1.1
ATPAF1-205ENST00000487193 BABAM2Q9NXR7 383 aa8.16□□□□□ -1.1
ATPAF1-205ENST00000487193 OR2W1Q9Y3N9 320 aa8.16□□□□□ -1.1
ATPAF1-205ENST00000487193 IGKV1D-8A0A087WSZ0 117 aa8.15□□□□□ -1.1
ATPAF1-205ENST00000487193 TRAV9-2A0A087WT02 112 aa8.15□□□□□ -1.1
ATPAF1-205ENST00000487193 LCE2BO14633 110 aa8.15□□□□□ -1.1
ATPAF1-205ENST00000487193 PSCAO43653 123 aa8.15□□□□□ -1.1
ATPAF1-205ENST00000487193 SLC22A5O76082 557 aa8.15□□□□□ -1.1
ATPAF1-205ENST00000487193 TMEM50AO95807 157 aa8.15□□□□□ -1.1
ATPAF1-205ENST00000487193 IGLV2-8P01709 118 aa8.15□□□□□ -1.1
ATPAF1-205ENST00000487193 NQO2P16083 231 aa8.15□□□□□ -1.1
ATPAF1-205ENST00000487193 HOXA5P20719 270 aa8.15□□□□□ -1.1
ATPAF1-205ENST00000487193 RORCP51449 518 aa8.15□□□□□ -1.1
ATPAF1-205ENST00000487193 TAS2R31P59538 309 aa8.15□□□□□ -1.1
ATPAF1-205ENST00000487193 P2RY14Q15391 338 aa8.15□□□□□ -1.1
ATPAF1-205ENST00000487193 C1orf100Q5SVJ3 147 aa8.15□□□□□ -1.1
ATPAF1-205ENST00000487193 C16orf54Q6UWD8 224 aa8.15□□□□□ -1.1
ATPAF1-205ENST00000487193 TMPRSS11AQ6ZMR5 421 aa8.15□□□□□ -1.1
ATPAF1-205ENST00000487193 PGLYRP3Q96LB9 341 aa8.15□□□□□ -1.1
ATPAF1-205ENST00000487193 CLUHP3Q96NS8 147 aa8.15□□□□□ -1.1
ATPAF1-205ENST00000487193 NSG2Q9Y328 171 aa8.15□□□□□ -1.1
ATPAF1-205ENST00000487193 OR51B2Q9Y5P1 312 aa8.15□□□□□ -1.1
ATPAF1-205ENST00000487193 LPAP08519 4548 aa8.14□□□□□ -1.11
ATPAF1-205ENST00000487193 DENRO43583 198 aaKnown RBP8.14□□□□□ -1.11
ATPAF1-205ENST00000487193 BPNT1O95861 308 aa8.14□□□□□ -1.11
ATPAF1-205ENST00000487193 NPBWR1P48145 328 aa8.14□□□□□ -1.11
ATPAF1-205ENST00000487193 PAX9P55771 341 aa8.14□□□□□ -1.11
ATPAF1-205ENST00000487193 FAM78BQ5VT40 261 aa8.14□□□□□ -1.11
ATPAF1-205ENST00000487193 FOXI2Q6ZQN5 318 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms