RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 A0A0A6YYH2 397 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 A0A0J9YW62 118 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 PGPA6NDG6 321 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 A6NJ64 397 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 ATP6V1G2-DDX39BF2Z307 99 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 GPR171O14626 319 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 ACOX3O15254 700 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 MSMBP08118 114 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 SCGB1C2P0DMR2 95 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 CPMP14384 443 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 EVI2BP34910 448 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 RAP1GDS1P52306 607 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 RAB25P57735 213 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 SNRPD2P62316 118 aaKnown RBP2.55□□□□□ -2
PRPF38A-203ENST00000487160 CTAG1AP78358 180 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 FAM3AP98173 230 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 MED21Q13503 144 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 TBC1D28Q2M2D7 210 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 LDLRAD2Q5SZI1 272 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 PP632Q6XCG6 107 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 AMN1Q8IY45 258 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 LINC00304Q8N9R0 145 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 OR52R1Q8NGF1 315 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 SCGB1C1Q8TD33 95 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 TWIST2Q8WVJ9 160 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 C1orf54Q8WWF1 131 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 PRSS27Q9BQR3 290 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 DCUN1D5Q9BTE7 237 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 FAAP24Q9BTP7 215 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 C1QTNF6Q9BXI9 259 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 FBXL15Q9H469 300 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 PAQR5Q9NXK6 330 aaPredicted RBP2.55□□□□□ -2
PRPF38A-203ENST00000487160 FBXO5Q9UKT4 447 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 C14orf166Q9Y224 244 aaKnown RBP2.55□□□□□ -2
PRPF38A-203ENST00000487160 ASB4Q9Y574 426 aa2.55□□□□□ -2
PRPF38A-203ENST00000487160 IGKV1OR2-108A0A075B7D4 117 aa2.54□□□□□ -2
PRPF38A-203ENST00000487160 IGHV3-15A0A0B4J1V0 119 aa2.54□□□□□ -2
PRPF38A-203ENST00000487160 F5H768 121 aa2.54□□□□□ -2
PRPF38A-203ENST00000487160 LYNX1G3V0Z9 82 aa2.54□□□□□ -2
PRPF38A-203ENST00000487160 FADS1O60427 444 aa2.54□□□□□ -2
PRPF38A-203ENST00000487160 INAFM2P0DMQ5 153 aa2.54□□□□□ -2
PRPF38A-203ENST00000487160 LYNX1P0DP58 116 aa2.54□□□□□ -2
PRPF38A-203ENST00000487160 COX5BP10606 129 aa2.54□□□□□ -2
PRPF38A-203ENST00000487160 GRPRP30550 384 aa2.54□□□□□ -2
PRPF38A-203ENST00000487160 IDH3GP51553 393 aaPredicted RBP2.54□□□□□ -2
PRPF38A-203ENST00000487160 SARNPP82979 210 aaKnown RBP2.54□□□□□ -2
PRPF38A-203ENST00000487160 ENDOGQ14249 297 aaKnown RBP2.54□□□□□ -2
PRPF38A-203ENST00000487160 TSNQ15631 228 aaKnown RBP2.54□□□□□ -2
PRPF38A-203ENST00000487160 TRMT12Q53H54 448 aaKnown RBP2.54□□□□□ -2
PRPF38A-203ENST00000487160 FAM162BQ5T6X4 162 aa2.54□□□□□ -2
PRPF38A-203ENST00000487160 ZFAND6Q6FIF0 208 aa2.54□□□□□ -2
PRPF38A-203ENST00000487160 SSX8Q7RTT4 187 aa2.54□□□□□ -2
PRPF38A-203ENST00000487160 MARCH3Q86UD3 253 aa2.54□□□□□ -2
PRPF38A-203ENST00000487160 C10orf107Q8IVU9 208 aa2.54□□□□□ -2
PRPF38A-203ENST00000487160 SIGLECL1Q8N7X8 197 aa2.54□□□□□ -2
PRPF38A-203ENST00000487160 GATD1Q8NB37 220 aa2.54□□□□□ -2
PRPF38A-203ENST00000487160 ATP6V1C2Q8NEY4 427 aa2.54□□□□□ -2
PRPF38A-203ENST00000487160 OR8J2Q8NGG1 315 aa2.54□□□□□ -2
PRPF38A-203ENST00000487160 OR2V1Q8NHB1 315 aa2.54□□□□□ -2
PRPF38A-203ENST00000487160 CLDND2Q8NHS1 167 aa2.54□□□□□ -2
PRPF38A-203ENST00000487160 OR2V2Q96R30 315 aa2.54□□□□□ -2
PRPF38A-203ENST00000487160 EFCAB11Q9BUY7 163 aa2.54□□□□□ -2
PRPF38A-203ENST00000487160 NSRP1Q9H0G5 558 aaKnown RBP2.54□□□□□ -2
PRPF38A-203ENST00000487160 BIRC6Q9NR09 4857 aa2.53□□□□□ -2
PRPF38A-203ENST00000487160 CSMD3Q7Z407 3707 aa2.53□□□□□ -2
PRPF38A-203ENST00000487160 TRAV8-3A0A0A6YYJ7 113 aa2.53□□□□□ -2
PRPF38A-203ENST00000487160 TINCRA0A1B0GVN0 87 aa2.53□□□□□ -2
PRPF38A-203ENST00000487160 A0A1W2PRG6 482 aa2.53□□□□□ -2
PRPF38A-203ENST00000487160 FAM183AA6NL82 134 aa2.53□□□□□ -2
PRPF38A-203ENST00000487160 F5H5K5 113 aa2.53□□□□□ -2
PRPF38A-203ENST00000487160 ENTPD6O75354 484 aa2.53□□□□□ -2
PRPF38A-203ENST00000487160 STK16O75716 305 aa2.53□□□□□ -2
PRPF38A-203ENST00000487160 HLA-AP01891 365 aaKnown RBP2.53□□□□□ -2
PRPF38A-203ENST00000487160 TRGV3P03979 118 aa2.53□□□□□ -2
PRPF38A-203ENST00000487160 SLC2A1P11166 492 aa2.53□□□□□ -2
PRPF38A-203ENST00000487160 PTHLHP12272 177 aa2.53□□□□□ -2
PRPF38A-203ENST00000487160 HIST1H1CP16403 213 aaKnown RBP2.53□□□□□ -2
PRPF38A-203ENST00000487160 PLPPR5Q32ZL2 321 aa2.53□□□□□ -2
PRPF38A-203ENST00000487160 SLC36A2Q495M3 483 aa2.53□□□□□ -2
PRPF38A-203ENST00000487160 NXNL2Q5VZ03 156 aa2.53□□□□□ -2
PRPF38A-203ENST00000487160 CALHM3Q86XJ0 350 aa2.53□□□□□ -2
PRPF38A-203ENST00000487160 ZFP82Q8N141 532 aa2.53□□□□□ -2
PRPF38A-203ENST00000487160 TEX29Q8N6K0 151 aa2.53□□□□□ -2
PRPF38A-203ENST00000487160 UBL4BQ8N7F7 174 aa2.53□□□□□ -2
PRPF38A-203ENST00000487160 TP53TG1Q9Y2A0 90 aa2.53□□□□□ -2
PRPF38A-203ENST00000487160 IGLV3-32A0A0A0MS00 114 aa2.52□□□□□ -2.01
PRPF38A-203ENST00000487160 IGHV3-43A0A0B4J1X8 118 aa2.52□□□□□ -2.01
PRPF38A-203ENST00000487160 MIF4GDA9UHW6 222 aaKnown RBP2.52□□□□□ -2.01
PRPF38A-203ENST00000487160 H3BQ85 93 aa2.52□□□□□ -2.01
PRPF38A-203ENST00000487160 K7ERS5 55 aa2.52□□□□□ -2.01
PRPF38A-203ENST00000487160 HPGDSO60760 199 aa2.52□□□□□ -2.01
PRPF38A-203ENST00000487160 BANF1O75531 89 aa2.52□□□□□ -2.01
PRPF38A-203ENST00000487160 OR4A8P0C604 315 aa2.52□□□□□ -2.01
PRPF38A-203ENST00000487160 SPNP16150 400 aa2.52□□□□□ -2.01
PRPF38A-203ENST00000487160 PVALBP20472 110 aaPredicted RBP2.52□□□□□ -2.01
PRPF38A-203ENST00000487160 SERPINB1P30740 379 aa2.52□□□□□ -2.01
PRPF38A-203ENST00000487160 PSPHP78330 225 aa2.52□□□□□ -2.01
PRPF38A-203ENST00000487160 FOXF1Q12946 379 aa2.52□□□□□ -2.01
PRPF38A-203ENST00000487160 BAMBIQ13145 260 aa2.52□□□□□ -2.01
PRPF38A-203ENST00000487160 SPA17Q15506 151 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms