RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 RND3P61587 244 aa18.17■□□□□ 0.5
LIME1-206ENST00000487026 PMS2P11Q13670 270 aa18.17■□□□□ 0.5
LIME1-206ENST00000487026 ZNF124Q15973 351 aa18.17■□□□□ 0.5
LIME1-206ENST00000487026 Q6ZWC4 215 aa18.17■□□□□ 0.5
LIME1-206ENST00000487026 LHFPL1Q86WI0 220 aa18.17■□□□□ 0.5
LIME1-206ENST00000487026 ABHD1Q96SE0 405 aa18.17■□□□□ 0.5
LIME1-206ENST00000487026 A0A0B4J293 547 aa18.16■□□□□ 0.5
LIME1-206ENST00000487026 GNG7O60262 68 aa18.16■□□□□ 0.5
LIME1-206ENST00000487026 ZNF182P17025 639 aaPredicted RBP18.16■□□□□ 0.5
LIME1-206ENST00000487026 PPP5CP53041 499 aa18.16■□□□□ 0.5
LIME1-206ENST00000487026 LYG2Q86SG7 212 aa18.16■□□□□ 0.5
LIME1-206ENST00000487026 STPG3Q8N7X2 389 aa18.16■□□□□ 0.5
LIME1-206ENST00000487026 OR4D10Q8NGI6 311 aa18.16■□□□□ 0.5
LIME1-206ENST00000487026 ZNF486Q96H40 463 aaPredicted RBP18.16■□□□□ 0.5
LIME1-206ENST00000487026 OR10C1Q96KK4 312 aa18.16■□□□□ 0.5
LIME1-206ENST00000487026 MTFP1Q9UDX5 166 aa18.16■□□□□ 0.5
LIME1-206ENST00000487026 TP53TG1Q9Y2A0 90 aa18.16■□□□□ 0.5
LIME1-206ENST00000487026 BIRC6Q9NR09 4857 aa18.16■□□□□ 0.5
LIME1-206ENST00000487026 TRAV14DV4A0A0A6YYC5 116 aa18.15■□□□□ 0.5
LIME1-206ENST00000487026 UBE2CO00762 179 aa18.15■□□□□ 0.5
LIME1-206ENST00000487026 SMIM18P0DKX4 95 aa18.15■□□□□ 0.5
LIME1-206ENST00000487026 SP6Q3SY56 376 aa18.15■□□□□ 0.5
LIME1-206ENST00000487026 GPR107Q5VW38 600 aa18.15■□□□□ 0.5
LIME1-206ENST00000487026 WFDC3Q8IUB2 231 aa18.15■□□□□ 0.5
LIME1-206ENST00000487026 GBGT1Q8N5D6 347 aa18.15■□□□□ 0.5
LIME1-206ENST00000487026 AP3S1Q92572 193 aa18.15■□□□□ 0.5
LIME1-206ENST00000487026 C3orf85A0A1B0GTC6 90 aa18.14■□□□□ 0.49
LIME1-206ENST00000487026 CXorf65A6NEN9 183 aa18.14■□□□□ 0.49
LIME1-206ENST00000487026 ST8SIA3O43173 380 aa18.14■□□□□ 0.49
LIME1-206ENST00000487026 GABARAPO95166 117 aa18.14■□□□□ 0.49
LIME1-206ENST00000487026 P0C879 139 aa18.14■□□□□ 0.49
LIME1-206ENST00000487026 BMI1P35226 326 aa18.14■□□□□ 0.49
LIME1-206ENST00000487026 AKR1C2P52895 323 aa18.14■□□□□ 0.49
LIME1-206ENST00000487026 ARRDC1Q8N5I2 433 aa18.14■□□□□ 0.49
LIME1-206ENST00000487026 RNF183Q96D59 192 aa18.14■□□□□ 0.49
LIME1-206ENST00000487026 GALNT14Q96FL9 552 aa18.14■□□□□ 0.49
LIME1-206ENST00000487026 KIR2DL5BA0A0G2JN68 375 aa18.13■□□□□ 0.49
LIME1-206ENST00000487026 KIR2DL5BA0A0G2JPC4 375 aa18.13■□□□□ 0.49
LIME1-206ENST00000487026 IFNA17P01571 189 aa18.13■□□□□ 0.49
LIME1-206ENST00000487026 SNCAP37840 140 aa18.13■□□□□ 0.49
LIME1-206ENST00000487026 ETV6P41212 452 aa18.13■□□□□ 0.49
LIME1-206ENST00000487026 TNFRSF9Q07011 255 aa18.13■□□□□ 0.49
LIME1-206ENST00000487026 TOMM20LQ6UXN7 152 aa18.13■□□□□ 0.49
LIME1-206ENST00000487026 KIR2DL5AQ8N109 375 aa18.13■□□□□ 0.49
LIME1-206ENST00000487026 SLC35G3Q8N808 338 aa18.13■□□□□ 0.49
LIME1-206ENST00000487026 KIR2DL5BQ8NHK3 375 aa18.13■□□□□ 0.49
LIME1-206ENST00000487026 MAP6D1Q9H9H5 199 aa18.13■□□□□ 0.49
LIME1-206ENST00000487026 APOHP02749 345 aaPredicted RBP18.12■□□□□ 0.49
LIME1-206ENST00000487026 TRIM16LQ309B1 348 aa18.12■□□□□ 0.49
LIME1-206ENST00000487026 SCGB2B2Q4G0G5 96 aa18.12■□□□□ 0.49
LIME1-206ENST00000487026 LILRB2Q8N423 598 aa18.12■□□□□ 0.49
LIME1-206ENST00000487026 TERB2Q8NHR7 220 aa18.12■□□□□ 0.49
LIME1-206ENST00000487026 COPZ2Q9P299 210 aa18.12■□□□□ 0.49
LIME1-206ENST00000487026 NPBWR1P48145 328 aa18.11■□□□□ 0.49
LIME1-206ENST00000487026 FAM90A2PQ658T7 463 aa18.11■□□□□ 0.49
LIME1-206ENST00000487026 TMEM229BQ8NBD8 167 aa18.11■□□□□ 0.49
LIME1-206ENST00000487026 DUSP18Q8NEJ0 188 aa18.11■□□□□ 0.49
LIME1-206ENST00000487026 OR13C8Q8NGS7 320 aa18.11■□□□□ 0.49
LIME1-206ENST00000487026 MARCH1Q8TCQ1 289 aa18.11■□□□□ 0.49
LIME1-206ENST00000487026 MIXL1Q9H2W2 232 aa18.11■□□□□ 0.49
LIME1-206ENST00000487026 IGHV3-66A0A0C4DH42 116 aa18.1■□□□□ 0.49
LIME1-206ENST00000487026 A0A0G2JRQ6 117 aa18.1■□□□□ 0.49
LIME1-206ENST00000487026 RAB3DO95716 219 aa18.1■□□□□ 0.49
LIME1-206ENST00000487026 TBPP20226 339 aa18.1■□□□□ 0.49
LIME1-206ENST00000487026 TCF24Q7RTU0 167 aa18.1■□□□□ 0.49
LIME1-206ENST00000487026 ZFAND1Q8TCF1 268 aa18.1■□□□□ 0.49
LIME1-206ENST00000487026 ST8SIA2Q92186 375 aa18.1■□□□□ 0.49
LIME1-206ENST00000487026 TMEM50AO95807 157 aa18.09■□□□□ 0.49
LIME1-206ENST00000487026 CD74P04233 296 aa18.09■□□□□ 0.49
LIME1-206ENST00000487026 RNASE2P10153 161 aaKnown RBP18.09■□□□□ 0.49
LIME1-206ENST00000487026 TAS2R19P59542 299 aa18.09■□□□□ 0.49
LIME1-206ENST00000487026 MLANAQ16655 118 aa18.09■□□□□ 0.49
LIME1-206ENST00000487026 FAAP20Q6NZ36 180 aa18.09■□□□□ 0.49
LIME1-206ENST00000487026 GINS3Q9BRX5 216 aa18.09■□□□□ 0.49
LIME1-206ENST00000487026 PDCD10Q9BUL8 212 aa18.09■□□□□ 0.49
LIME1-206ENST00000487026 PUS1Q9Y606 427 aaKnown RBP eCLIP18.09■□□□□ 0.49
LIME1-206ENST00000487026 CTDSP2O14595 271 aa18.08■□□□□ 0.48
LIME1-206ENST00000487026 ATG12O94817 140 aa18.08■□□□□ 0.48
LIME1-206ENST00000487026 HOXA1P49639 335 aaPredicted RBP18.08■□□□□ 0.48
LIME1-206ENST00000487026 STEAP1BQ6NZ63 245 aa18.08■□□□□ 0.48
LIME1-206ENST00000487026 Q6ZRM9 215 aa18.08■□□□□ 0.48
LIME1-206ENST00000487026 CCDC71LQ8N9Z2 235 aa18.08■□□□□ 0.48
LIME1-206ENST00000487026 C6orf62Q9GZU0 229 aaPredicted RBP18.08■□□□□ 0.48
LIME1-206ENST00000487026 ZFAND3Q9H8U3 227 aa18.08■□□□□ 0.48
LIME1-206ENST00000487026 MRPL36Q9P0J6 103 aaKnown RBP18.08■□□□□ 0.48
LIME1-206ENST00000487026 A0A1B0GU03 582 aa18.07■□□□□ 0.48
LIME1-206ENST00000487026 INS-IGF2F8WCM5 200 aa18.07■□□□□ 0.48
LIME1-206ENST00000487026 RGS5O15539 181 aa18.07■□□□□ 0.48
LIME1-206ENST00000487026 DFFBO76075 338 aa18.07■□□□□ 0.48
LIME1-206ENST00000487026 UCP1P25874 307 aa18.07■□□□□ 0.48
LIME1-206ENST00000487026 SUB1P53999 127 aaKnown RBP eCLIP18.07■□□□□ 0.48
LIME1-206ENST00000487026 CMC4P56277 68 aaPredicted RBP18.07■□□□□ 0.48
LIME1-206ENST00000487026 PVRIGQ6DKI7 326 aa18.07■□□□□ 0.48
LIME1-206ENST00000487026 ZNF600Q6ZNG1 722 aa18.07■□□□□ 0.48
LIME1-206ENST00000487026 RNASE11Q8TAA1 199 aaKnown RBP18.07■□□□□ 0.48
LIME1-206ENST00000487026 C15orf40Q8WUR7 153 aa18.07■□□□□ 0.48
LIME1-206ENST00000487026 RRNAD1Q96FB5 475 aaKnown RBP18.07■□□□□ 0.48
LIME1-206ENST00000487026 CSTL1Q9H114 145 aa18.07■□□□□ 0.48
LIME1-206ENST00000487026 VSIRQ9H7M9 311 aa18.07■□□□□ 0.48
LIME1-206ENST00000487026 GABARAPH6UMI1 98 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms