RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 MBD2Q9UBB5 411 aa12□□□□□ -0.49
SEMA4D-219ENST00000486935 WSB1Q9Y6I7 421 aa12□□□□□ -0.49
SEMA4D-219ENST00000486935 G3V318 75 aa11.99□□□□□ -0.49
SEMA4D-219ENST00000486935 H3BP45 60 aa11.99□□□□□ -0.49
SEMA4D-219ENST00000486935 PFDN1O60925 122 aa11.99□□□□□ -0.49
SEMA4D-219ENST00000486935 DEDDO75618 318 aa11.99□□□□□ -0.49
SEMA4D-219ENST00000486935 RLN2P04090 185 aa11.99□□□□□ -0.49
SEMA4D-219ENST00000486935 PET100P0DJ07 73 aa11.99□□□□□ -0.49
SEMA4D-219ENST00000486935 OR13C7P0DN81 318 aa11.99□□□□□ -0.49
SEMA4D-219ENST00000486935 PVALBP20472 110 aaPredicted RBP11.99□□□□□ -0.49
SEMA4D-219ENST00000486935 ERHP84090 104 aaKnown RBP11.99□□□□□ -0.49
SEMA4D-219ENST00000486935 WT1-ASQ06250 92 aa11.99□□□□□ -0.49
SEMA4D-219ENST00000486935 FGL1Q08830 312 aa11.99□□□□□ -0.49
SEMA4D-219ENST00000486935 RNF152Q8N8N0 203 aa11.99□□□□□ -0.49
SEMA4D-219ENST00000486935 THAP6Q8TBB0 222 aa11.99□□□□□ -0.49
SEMA4D-219ENST00000486935 RAB40CQ96S21 281 aa11.99□□□□□ -0.49
SEMA4D-219ENST00000486935 TRAV41A0A0B4J266 112 aa11.98□□□□□ -0.49
SEMA4D-219ENST00000486935 H0YIZ8 118 aa11.98□□□□□ -0.49
SEMA4D-219ENST00000486935 ASPHD1Q5U4P2 390 aa11.98□□□□□ -0.49
SEMA4D-219ENST00000486935 PRSS54Q6PEW0 395 aa11.98□□□□□ -0.49
SEMA4D-219ENST00000486935 TMEM65Q6PI78 240 aa11.98□□□□□ -0.49
SEMA4D-219ENST00000486935 C19orf35Q6ZS72 473 aa11.98□□□□□ -0.49
SEMA4D-219ENST00000486935 HSD17B13Q7Z5P4 300 aaPredicted RBP11.98□□□□□ -0.49
SEMA4D-219ENST00000486935 TCTE3Q8IZS6 198 aa11.98□□□□□ -0.49
SEMA4D-219ENST00000486935 OR2C3Q8N628 320 aa11.98□□□□□ -0.49
SEMA4D-219ENST00000486935 DCUN1D4Q92564 292 aa11.98□□□□□ -0.49
SEMA4D-219ENST00000486935 CIB3Q96Q77 187 aaPredicted RBP11.98□□□□□ -0.49
SEMA4D-219ENST00000486935 NEURL2Q9BR09 285 aa11.98□□□□□ -0.49
SEMA4D-219ENST00000486935 SRSF8Q9BRL6 282 aaKnown RBP11.98□□□□□ -0.49
SEMA4D-219ENST00000486935 PSENENQ9NZ42 101 aa11.98□□□□□ -0.49
SEMA4D-219ENST00000486935 PAIP2BQ9ULR5 123 aaKnown RBP11.98□□□□□ -0.49
SEMA4D-219ENST00000486935 FXYD6-FXYD2A0A087WZ82 144 aa11.97□□□□□ -0.49
SEMA4D-219ENST00000486935 G3V3Q6 166 aa11.97□□□□□ -0.49
SEMA4D-219ENST00000486935 TMEM50AO95807 157 aa11.97□□□□□ -0.49
SEMA4D-219ENST00000486935 IFNA10P01566 189 aa11.97□□□□□ -0.49
SEMA4D-219ENST00000486935 PSMB8P28062 276 aa11.97□□□□□ -0.49
SEMA4D-219ENST00000486935 SNCAP37840 140 aa11.97□□□□□ -0.49
SEMA4D-219ENST00000486935 PAX9P55771 341 aa11.97□□□□□ -0.49
SEMA4D-219ENST00000486935 TMEM267Q0VDI3 215 aaPredicted RBP11.97□□□□□ -0.49
SEMA4D-219ENST00000486935 SPANXN5Q5MJ07 72 aa11.97□□□□□ -0.49
SEMA4D-219ENST00000486935 SLC24A4Q8NFF2 622 aa11.97□□□□□ -0.49
SEMA4D-219ENST00000486935 OR5T1Q8NG75 326 aa11.97□□□□□ -0.49
SEMA4D-219ENST00000486935 SMIM8Q96KF7 97 aa11.97□□□□□ -0.49
SEMA4D-219ENST00000486935 RNF126Q9BV68 326 aa11.97□□□□□ -0.49
SEMA4D-219ENST00000486935 KLK15Q9H2R5 256 aa11.97□□□□□ -0.49
SEMA4D-219ENST00000486935 E5RGE8 158 aa11.96□□□□□ -0.49
SEMA4D-219ENST00000486935 CAV2P51636 162 aa11.96□□□□□ -0.49
SEMA4D-219ENST00000486935 CRIP2P52943 208 aaPredicted RBP11.96□□□□□ -0.49
SEMA4D-219ENST00000486935 C4orf3Q8WVX3 66 aa11.96□□□□□ -0.49
SEMA4D-219ENST00000486935 OR4C12Q96R67 309 aa11.96□□□□□ -0.49
SEMA4D-219ENST00000486935 C11orf1Q9H5F2 150 aa11.96□□□□□ -0.49
SEMA4D-219ENST00000486935 ZMAT5Q9UDW3 170 aaKnown RBP11.96□□□□□ -0.49
SEMA4D-219ENST00000486935 ZNF580Q9UK33 172 aa11.96□□□□□ -0.49
SEMA4D-219ENST00000486935 FAM24AA6NFZ4 105 aa11.95□□□□□ -0.5
SEMA4D-219ENST00000486935 NPIPB5A8MRT5 1133 aa11.95□□□□□ -0.5
SEMA4D-219ENST00000486935 INS-IGF2F8WCM5 200 aa11.95□□□□□ -0.5
SEMA4D-219ENST00000486935 TSC22D2O75157 780 aa11.95□□□□□ -0.5
SEMA4D-219ENST00000486935 LY86O95711 162 aa11.95□□□□□ -0.5
SEMA4D-219ENST00000486935 PRH1P02810 166 aa11.95□□□□□ -0.5
SEMA4D-219ENST00000486935 RNASE2P10153 161 aaKnown RBP11.95□□□□□ -0.5
SEMA4D-219ENST00000486935 DEFA4P12838 97 aa11.95□□□□□ -0.5
SEMA4D-219ENST00000486935 CTRB1P17538 263 aa11.95□□□□□ -0.5
SEMA4D-219ENST00000486935 NPY1RP25929 384 aa11.95□□□□□ -0.5
SEMA4D-219ENST00000486935 PPIFP30405 207 aaKnown RBP11.95□□□□□ -0.5
SEMA4D-219ENST00000486935 HTR2BP41595 481 aa11.95□□□□□ -0.5
SEMA4D-219ENST00000486935 TAS2R30P59541 319 aa11.95□□□□□ -0.5
SEMA4D-219ENST00000486935 RPP30P78346 268 aaKnown RBP11.95□□□□□ -0.5
SEMA4D-219ENST00000486935 AKIRIN2Q53H80 203 aa11.95□□□□□ -0.5
SEMA4D-219ENST00000486935 CTRB2Q6GPI1 263 aa11.95□□□□□ -0.5
SEMA4D-219ENST00000486935 TTC9CQ8N5M4 171 aa11.95□□□□□ -0.5
SEMA4D-219ENST00000486935 OR11H1Q8NG94 326 aa11.95□□□□□ -0.5
SEMA4D-219ENST00000486935 TMEM68Q96MH6 324 aa11.95□□□□□ -0.5
SEMA4D-219ENST00000486935 OR5B12Q96R08 314 aa11.95□□□□□ -0.5
SEMA4D-219ENST00000486935 ZNF355PQ9NSJ1 428 aa11.95□□□□□ -0.5
SEMA4D-219ENST00000486935 STRAPQ9Y3F4 350 aaKnown RBP11.95□□□□□ -0.5
SEMA4D-219ENST00000486935 C15orf62A8K5M9 175 aa11.94□□□□□ -0.5
SEMA4D-219ENST00000486935 SEC14L6B5MCN3 397 aa11.94□□□□□ -0.5
SEMA4D-219ENST00000486935 IGLV1-40P01703 118 aa11.94□□□□□ -0.5
SEMA4D-219ENST00000486935 OR8U8P0C7N1 319 aa11.94□□□□□ -0.5
SEMA4D-219ENST00000486935 SLC25A4P12235 298 aa11.94□□□□□ -0.5
SEMA4D-219ENST00000486935 LYL1P12980 280 aa11.94□□□□□ -0.5
SEMA4D-219ENST00000486935 P2RY1P47900 373 aa11.94□□□□□ -0.5
SEMA4D-219ENST00000486935 RAB9AP51151 201 aa11.94□□□□□ -0.5
SEMA4D-219ENST00000486935 SUB1P53999 127 aaKnown RBP eCLIP11.94□□□□□ -0.5
SEMA4D-219ENST00000486935 CD69Q07108 199 aa11.94□□□□□ -0.5
SEMA4D-219ENST00000486935 KIAA0141Q14154 515 aaPredicted RBP11.94□□□□□ -0.5
SEMA4D-219ENST00000486935 C19orf54Q5BKX5 351 aa11.94□□□□□ -0.5
SEMA4D-219ENST00000486935 ZNF491Q8N8L2 437 aa11.94□□□□□ -0.5
SEMA4D-219ENST00000486935 OR1N2Q8NGR9 330 aa11.94□□□□□ -0.5
SEMA4D-219ENST00000486935 UBE2E2Q96LR5 201 aa11.94□□□□□ -0.5
SEMA4D-219ENST00000486935 GNB4Q9HAV0 340 aa11.94□□□□□ -0.5
SEMA4D-219ENST00000486935 LYRM2Q9NU23 88 aaPredicted RBP11.94□□□□□ -0.5
SEMA4D-219ENST00000486935 F11RQ9Y624 299 aaKnown RBP11.94□□□□□ -0.5
SEMA4D-219ENST00000486935 U3KQ87 197 aa11.94□□□□□ -0.5
SEMA4D-219ENST00000486935 IGSF23A1L1A6 192 aa11.93□□□□□ -0.5
SEMA4D-219ENST00000486935 C1QBP02746 253 aa11.93□□□□□ -0.5
SEMA4D-219ENST00000486935 CRYGCP07315 174 aa11.93□□□□□ -0.5
SEMA4D-219ENST00000486935 METTL15P1P0C7V9 234 aa11.93□□□□□ -0.5
SEMA4D-219ENST00000486935 BSXQ3C1V8 233 aa11.93□□□□□ -0.5
SEMA4D-219ENST00000486935 ZFP69Q49AA0 526 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms