RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 Q5PR19 223 aa10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 TPTE2P1Q5T6R2 138 aa10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 KIR2DL5AQ8N109 375 aa10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 TMEM45BQ96B21 275 aa10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 CXXC4Q9H2H0 198 aa10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 NPVFQ9HCQ7 196 aa10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 DYNLRB1Q9NP97 96 aa10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 MALRD1Q5VYJ5 2156 aa10.25□□□□□ -0.77
SHROOM3-208ENST00000486758 TRAV3A0A0B4J244 114 aa10.24□□□□□ -0.77
SHROOM3-208ENST00000486758 FAM90A26D6RGX4 464 aa10.24□□□□□ -0.77
SHROOM3-208ENST00000486758 LINC00614P0C842 121 aa10.24□□□□□ -0.77
SHROOM3-208ENST00000486758 CD59P13987 128 aa10.24□□□□□ -0.77
SHROOM3-208ENST00000486758 COA6Q5JTJ3 125 aaKnown RBP10.24□□□□□ -0.77
SHROOM3-208ENST00000486758 ZNF841Q6ZN19 808 aa10.24□□□□□ -0.77
SHROOM3-208ENST00000486758 C9orf106Q8NAJ2 232 aa10.24□□□□□ -0.77
SHROOM3-208ENST00000486758 NAA38Q9BRA0 125 aaKnown RBP10.24□□□□□ -0.77
SHROOM3-208ENST00000486758 TP73-AS1Q9UF72 201 aa10.24□□□□□ -0.77
SHROOM3-208ENST00000486758 LINC00473A8K010 186 aa10.24□□□□□ -0.77
SHROOM3-208ENST00000486758 CEACAM8P31997 349 aaPredicted RBP10.24□□□□□ -0.77
SHROOM3-208ENST00000486758 DAZAP2Q15038 168 aaPredicted RBP10.24□□□□□ -0.77
SHROOM3-208ENST00000486758 C1orf185Q5T7R7 199 aa10.24□□□□□ -0.77
SHROOM3-208ENST00000486758 RNF138Q8WVD3 245 aa10.24□□□□□ -0.77
SHROOM3-208ENST00000486758 EAF1Q96JC9 268 aaPredicted RBP10.24□□□□□ -0.77
SHROOM3-208ENST00000486758 LINC00479Q96M42 142 aa10.24□□□□□ -0.77
SHROOM3-208ENST00000486758 CCL13Q99616 98 aa10.24□□□□□ -0.77
SHROOM3-208ENST00000486758 LINC00470Q9BZP3 86 aa10.24□□□□□ -0.77
SHROOM3-208ENST00000486758 CHEK1O14757 476 aa10.24□□□□□ -0.77
SHROOM3-208ENST00000486758 CD24P25063 80 aa10.24□□□□□ -0.77
SHROOM3-208ENST00000486758 FOXL1Q12952 345 aa10.24□□□□□ -0.77
SHROOM3-208ENST00000486758 ITLN1Q8WWA0 313 aa10.24□□□□□ -0.77
SHROOM3-208ENST00000486758 IL19Q9UHD0 177 aa10.24□□□□□ -0.77
SHROOM3-208ENST00000486758 HYPMO75409 117 aa10.23□□□□□ -0.77
SHROOM3-208ENST00000486758 GPX1P07203 203 aa10.23□□□□□ -0.77
SHROOM3-208ENST00000486758 RPL15P61313 204 aaKnown RBP10.23□□□□□ -0.77
SHROOM3-208ENST00000486758 TREML4Q6UXN2 200 aa10.23□□□□□ -0.77
SHROOM3-208ENST00000486758 C1orf174Q8IYL3 243 aa10.23□□□□□ -0.77
SHROOM3-208ENST00000486758 SLC45A2Q9UMX9 530 aa10.23□□□□□ -0.77
SHROOM3-208ENST00000486758 ZNF835Q9Y2P0 537 aa10.23□□□□□ -0.77
SHROOM3-208ENST00000486758 C10orf142B7Z368 130 aa10.23□□□□□ -0.77
SHROOM3-208ENST00000486758 ZNF324O75467 553 aaPredicted RBP10.23□□□□□ -0.77
SHROOM3-208ENST00000486758 FTH1P19P0C7X4 201 aa10.23□□□□□ -0.77
SHROOM3-208ENST00000486758 ORM2P19652 201 aa10.23□□□□□ -0.77
SHROOM3-208ENST00000486758 MOB3BQ86TA1 216 aa10.23□□□□□ -0.77
SHROOM3-208ENST00000486758 TMEM140Q9NV12 185 aa10.23□□□□□ -0.77
SHROOM3-208ENST00000486758 ANKHD1Q8IWZ3 2542 aaKnown RBP10.23□□□□□ -0.77
SHROOM3-208ENST00000486758 A0A1W2PNU3 283 aaPredicted RBP10.23□□□□□ -0.77
SHROOM3-208ENST00000486758 CFAP161Q6P656 301 aa10.23□□□□□ -0.77
SHROOM3-208ENST00000486758 BHLHA15Q7RTS1 189 aaPredicted RBP10.23□□□□□ -0.77
SHROOM3-208ENST00000486758 SAXO1Q8IYX7 474 aa10.23□□□□□ -0.77
SHROOM3-208ENST00000486758 TCF19Q9Y242 345 aa10.23□□□□□ -0.77
SHROOM3-208ENST00000486758 SH2D7A6NKC9 451 aaPredicted RBP10.22□□□□□ -0.77
SHROOM3-208ENST00000486758 BMPR1BO00238 502 aa10.22□□□□□ -0.77
SHROOM3-208ENST00000486758 TNFSF4P23510 183 aa10.22□□□□□ -0.77
SHROOM3-208ENST00000486758 KLF3P57682 345 aaPredicted RBP10.22□□□□□ -0.77
SHROOM3-208ENST00000486758 TAS2R45P59539 299 aa10.22□□□□□ -0.77
SHROOM3-208ENST00000486758 FBLN7Q53RD9 439 aa10.22□□□□□ -0.77
SHROOM3-208ENST00000486758 WDR86Q86TI4 376 aa10.22□□□□□ -0.77
SHROOM3-208ENST00000486758 KCNS1Q96KK3 526 aa10.22□□□□□ -0.77
SHROOM3-208ENST00000486758 C20orf144Q9BQM9 153 aa10.22□□□□□ -0.77
SHROOM3-208ENST00000486758 WDR83OSQ9Y284 106 aa10.22□□□□□ -0.77
SHROOM3-208ENST00000486758 NCKAP5O14513 1909 aa10.22□□□□□ -0.77
SHROOM3-208ENST00000486758 CCL25O15444 150 aa10.22□□□□□ -0.77
SHROOM3-208ENST00000486758 COX7A2P2O60397 106 aa10.22□□□□□ -0.77
SHROOM3-208ENST00000486758 PLGLAQ15195 96 aa10.22□□□□□ -0.77
SHROOM3-208ENST00000486758 SPSB4Q96A44 273 aa10.22□□□□□ -0.77
SHROOM3-208ENST00000486758 ZC2HC1AQ96GY0 325 aa10.22□□□□□ -0.77
SHROOM3-208ENST00000486758 IGHV3-72A0A0B4J1Y9 119 aa10.22□□□□□ -0.77
SHROOM3-208ENST00000486758 A0A1W2PRD5 423 aa10.22□□□□□ -0.77
SHROOM3-208ENST00000486758 A0A1W2PRF3 423 aa10.22□□□□□ -0.77
SHROOM3-208ENST00000486758 A0A1W2PRM7 423 aa10.22□□□□□ -0.77
SHROOM3-208ENST00000486758 EFNB3Q15768 340 aa10.22□□□□□ -0.77
SHROOM3-208ENST00000486758 GGTLC1Q9BX51 225 aa10.22□□□□□ -0.77
SHROOM3-208ENST00000486758 PKIBQ9C010 78 aa10.22□□□□□ -0.77
SHROOM3-208ENST00000486758 IGKV3D-15A0A087WSY6 115 aa10.21□□□□□ -0.77
SHROOM3-208ENST00000486758 C15orf62A8K5M9 175 aa10.21□□□□□ -0.77
SHROOM3-208ENST00000486758 TYMSP04818 313 aa10.21□□□□□ -0.77
SHROOM3-208ENST00000486758 MRPS11P82912 194 aaKnown RBP10.21□□□□□ -0.77
SHROOM3-208ENST00000486758 TNFAIP6P98066 277 aaPredicted RBP10.21□□□□□ -0.77
SHROOM3-208ENST00000486758 INO80CQ6PI98 192 aaPredicted RBP10.21□□□□□ -0.77
SHROOM3-208ENST00000486758 OR8B3Q8NGG8 313 aa10.21□□□□□ -0.77
SHROOM3-208ENST00000486758 RAB37Q96AX2 223 aa10.21□□□□□ -0.77
SHROOM3-208ENST00000486758 MGST2Q99735 147 aa10.21□□□□□ -0.77
SHROOM3-208ENST00000486758 NABP2Q9BQ15 211 aa10.21□□□□□ -0.77
SHROOM3-208ENST00000486758 SLC25A5P05141 298 aaKnown RBP10.21□□□□□ -0.77
SHROOM3-208ENST00000486758 MPV17L2Q567V2 206 aa10.21□□□□□ -0.77
SHROOM3-208ENST00000486758 ZNF497Q6ZNH5 498 aa10.21□□□□□ -0.77
SHROOM3-208ENST00000486758 CDX4O14627 284 aaPredicted RBP10.21□□□□□ -0.78
SHROOM3-208ENST00000486758 PDLIM4P50479 330 aa10.21□□□□□ -0.78
SHROOM3-208ENST00000486758 FAM27E3Q08E93 113 aa10.21□□□□□ -0.78
SHROOM3-208ENST00000486758 CLEC7AQ9BXN2 247 aa10.21□□□□□ -0.78
SHROOM3-208ENST00000486758 CHTOPQ9Y3Y2 248 aaKnown RBP10.21□□□□□ -0.78
SHROOM3-208ENST00000486758 TRGV10A0A0A0MS01 117 aa10.2□□□□□ -0.78
SHROOM3-208ENST00000486758 A0A1W2PS18 150 aa10.2□□□□□ -0.78
SHROOM3-208ENST00000486758 CA2P00918 260 aa10.2□□□□□ -0.78
SHROOM3-208ENST00000486758 OPRK1P41145 380 aa10.2□□□□□ -0.78
SHROOM3-208ENST00000486758 CA7P43166 264 aa10.2□□□□□ -0.78
SHROOM3-208ENST00000486758 RIPPLY3P57055 190 aa10.2□□□□□ -0.78
SHROOM3-208ENST00000486758 TNXAQ16473 311 aa10.2□□□□□ -0.78
SHROOM3-208ENST00000486758 MLANAQ16655 118 aa10.2□□□□□ -0.78
SHROOM3-208ENST00000486758 SMIM15Q7Z3B0 74 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms